Experiment set2S58 for Erwinia amylovora T8

200 most detrimental genes:

gene	name	fitness	t score	description
OLJFJH_13435		+2.4	1.4	YciI family protein
OLJFJH_15100		+2.2	2.0	transcriptional regulator
OLJFJH_11380		+2.0	1.8	hypothetical protein
OLJFJH_10230		+2.0	4.7	SoxR-reducing system protein RseC
OLJFJH_10680		+2.0	1.9	Uncharacterized conserved protein RhaS contains 28 RHS repeats
OLJFJH_12480		+1.9	1.2	Epoxyqueuosine reductase QueH
OLJFJH_13330		+1.9	2.2	gluconate 5-dehydrogenase
OLJFJH_15015		+1.8	2.3	Type III flagellar switch regulator (C-ring) FliN C-term
OLJFJH_14830		+1.7	1.4	type VI secretion system-associated protein TagF
OLJFJH_15680		+1.7	2.7	biofilm formation regulator BssS
OLJFJH_12130		+1.5	1.4	glycosyltransferase family 1 protein
OLJFJH_04310		+1.5	2.5	glycerophosphodiester phosphodiesterase
OLJFJH_12045		+1.5	1.4	Amylovoran biosynthesis protein AmsC
OLJFJH_06200		+1.4	2.4	HTH-type transcriptional regulator HdfR
OLJFJH_12125		+1.4	1.9	glycosyl transferase
OLJFJH_18380		+1.4	0.8	anti-adapter protein IraP
OLJFJH_12115		+1.4	2.2	glycosyl transferase
OLJFJH_15890		+1.4	2.5	heat shock protein HspQ
OLJFJH_13440		+1.4	1.9	TonB system transport protein TonB
OLJFJH_18020		+1.4	4.0	cytochrome o ubiquinol oxidase subunit IV
OLJFJH_05060		+1.4	1.1	glutathione S-transferase
OLJFJH_02730		+1.3	3.1	hypothetical protein
OLJFJH_14095		+1.3	1.5	hypothetical protein
OLJFJH_18405		+1.3	2.1	glutamate-5-semialdehyde dehydrogenase
OLJFJH_02465		+1.3	1.2	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
OLJFJH_12105		+1.3	2.8	ABC transporter permease
OLJFJH_02980		+1.3	2.7	Histidyl-tRNA synthetase
OLJFJH_17435		+1.3	1.4	tRNA-Gly
OLJFJH_15605		+1.3	1.7	flagellar biosynthesis protein FlgF
OLJFJH_02045		+1.3	1.5	hypothetical protein
OLJFJH_02865		+1.3	2.1	PilL N-terminal domain-containing protein
OLJFJH_13675		+1.3	2.7	phage shock protein PspA
OLJFJH_10860		+1.3	1.0	phosphocarrier protein Hpr
OLJFJH_09155		+1.3	1.2	cysteine desulfurase CsdA
OLJFJH_10390		+1.3	2.6	GntR family transcriptional regulator
OLJFJH_01900		+1.3	1.4	type VI secretion system lipoprotein TssJ
OLJFJH_03140		+1.3	2.0	type VI secretion system protein TssL short form
OLJFJH_15010		+1.3	1.4	EscR/YscR/HrcR family type III secretion system export apparatus protein
OLJFJH_12870		+1.2	1.2	zinc ABC transporter ATP-binding protein ZnuC
OLJFJH_12955		+1.2	1.7	CAP-Gly protein
OLJFJH_16655		+1.2	1.1	YIP1 family protein
OLJFJH_01325		+1.2	1.3	thiamine ABC transporter ATP-binding protein ThiQ
OLJFJH_11440		+1.2	3.5	NADH-quinone oxidoreductase subunit NuoH
OLJFJH_05180		+1.2	1.0	membrane protein insertion efficiency factor YidD
OLJFJH_09490		+1.2	0.9	EscR/YscR/HrcR family type III secretion system export apparatus protein
OLJFJH_17310		+1.2	2.4	Conserved uncharacterized protein
OLJFJH_14170		+1.2	1.6	TetR family transcriptional regulator
OLJFJH_10990		+1.1	2.6	universal stress protein
OLJFJH_05705		+1.1	1.4	hypothetical protein
OLJFJH_11265		+1.1	1.9	cell division protein DedD
OLJFJH_07640		+1.1	1.5	hypothetical protein
OLJFJH_09065		+1.1	1.7	thymidylate synthase
OLJFJH_05860		+1.1	3.3	glycosyl transferase
OLJFJH_17050		+1.1	2.0	LexA regulated protein
OLJFJH_14670		+1.1	1.9	hypothetical protein
OLJFJH_15335		+1.1	1.4	antitermination protein
OLJFJH_02110		+1.1	1.5	hypothetical protein
OLJFJH_06470		+1.1	1.8	Uncharacterized protein yehS
OLJFJH_13905		+1.1	1.1	DUF2534 domain-containing protein
OLJFJH_01560		+1.1	1.1	LysR family transcriptional regulator
OLJFJH_05625		+1.1	1.5	type II toxin-antitoxin system PemK/MazF family toxin
OLJFJH_14990		+1.1	1.5	SycD/LcrH family type III secretion system chaperone
OLJFJH_05680		+1.0	1.0	hypothetical protein
OLJFJH_02280		+1.0	3.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase
OLJFJH_04845		+1.0	3.7	cellulose biosynthesis protein BcsQ
OLJFJH_18630		+1.0	0.7	ribonuclease HI
OLJFJH_18130		+1.0	2.1	Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose)
OLJFJH_10690		+1.0	2.8	RHS domain-containing protein
OLJFJH_12100		+1.0	1.6	NAD-dependent dehydratase
OLJFJH_09455		+1.0	1.8	type III secretion system gatekeeper subunit SctW
OLJFJH_06995		+1.0	1.6	Z-ring associated protein ZapG
OLJFJH_16160		+1.0	1.4	MFS transporter
OLJFJH_05245		+1.0	0.7	phage holin lambda family
OLJFJH_04935		+1.0	0.7	Transcriptional regulator
OLJFJH_12270		+1.0	1.6	stress responsive protein
OLJFJH_14630		+1.0	1.4	hemin-degrading factor
OLJFJH_11655		+1.0	1.4	restriction endonuclease
OLJFJH_07050		+0.9	3.6	PTS phosphocarrier protein NPr
OLJFJH_17390		+0.9	1.8	leucine-rich repeat domain-containing protein
OLJFJH_11015		+0.9	1.9	hypothetical protein
OLJFJH_01390		+0.9	1.8	lysine transporter LysE
OLJFJH_12160		+0.9	0.7	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase
OLJFJH_15005		+0.9	0.9	type III secretion system export apparatus subunit SctS
OLJFJH_04895		+0.9	1.8	organic hydroperoxide resistance protein
OLJFJH_08210		+0.9	2.5	type III secretion system protein
OLJFJH_13625		+0.9	1.9	type VI secretion protein
OLJFJH_09475		+0.9	1.3	type III secretion system protein
OLJFJH_03700		+0.9	0.8	DUF494 domain-containing protein
OLJFJH_06320		+0.9	2.6	lipid III flippase WzxE
OLJFJH_13345		+0.9	1.4	4-oxalomesaconate tautomerase
OLJFJH_05130		+0.9	3.1	YceK/YidQ family lipoprotein
OLJFJH_09235		+0.9	2.5	two-component sensor histidine kinase BarA
OLJFJH_16550		+0.9	0.6	amidohydrolase
OLJFJH_08900		+0.9	1.9	hemolysin
OLJFJH_16570		+0.9	1.1	Putative DNA-binding protein
OLJFJH_06535		+0.9	2.9	transcription/translation regulatory transformer protein RfaH
OLJFJH_12145		+0.9	1.2	Aminoacyl-tRNA editing domain-containing protein
OLJFJH_08810		+0.9	1.8	FAD assembly factor SdhE
OLJFJH_18035		+0.9	0.9	YajQ family cyclic di-GMP-binding protein
OLJFJH_14275		+0.9	3.2	transcriptional regulator
OLJFJH_17955		+0.9	1.0	DNA-binding protein HU-beta
OLJFJH_12080		+0.9	1.6	UTP--glucose-1-phosphate uridylyltransferase GalF
OLJFJH_09360		+0.9	2.2	tRNA pseudouridine(13) synthase TruD
OLJFJH_02990		+0.9	1.5	hypothetical protein
OLJFJH_09485		+0.9	1.5	type III secretion system protein
OLJFJH_17070		+0.9	0.9	hypothetical protein
OLJFJH_04560		+0.9	1.3	ribonuclease Z
OLJFJH_06310		+0.9	2.4	dTDP-4-amino-4 6-dideoxy-D-galactose acyltransferase
OLJFJH_03385		+0.9	2.0	redox-sensitive transcriptional activator SoxR
OLJFJH_16445		+0.9	0.8	DNA starvation/stationary phase protection protein Dps
OLJFJH_16455		+0.9	2.4	glutamine ABC transporter substrate-binding protein GlnH
OLJFJH_02515		+0.8	1.6	N-acetylmuramoyl-L-alanine amidase AmiB
OLJFJH_04850		+0.8	2.3	cellulose biosynthesis protein BcsO
OLJFJH_01165		+0.8	1.5	type II secretion system pilot lipoprotein GspS
OLJFJH_02905		+0.8	1.7	TIGR03761 family integrating conjugative element protein
OLJFJH_09405		+0.8	1.2	type III secretion system protein
OLJFJH_06135		+0.8	2.0	glutathione peroxidase
OLJFJH_02480		+0.8	1.1	DUF2065 domain-containing protein
OLJFJH_16005		+0.8	1.9	Alkanesulfonate monooxygenase
OLJFJH_18265		+0.8	0.7	YaiA
OLJFJH_12315		+0.8	1.3	E3 ubiquitin--protein ligase
OLJFJH_17385		+0.8	2.3	hypothetical protein
OLJFJH_10235		+0.8	1.6	antitermination protein
OLJFJH_13125		+0.8	1.6	YcgL domain-containing protein VC-1957
OLJFJH_13785		+0.8	0.7	DUF333 domain-containing protein
OLJFJH_00875		+0.8	1.0	hypothetical protein
OLJFJH_12085		+0.8	1.7	UDP-glucose 4-epimerase GalE
OLJFJH_00820		+0.8	1.5	hypothetical protein
OLJFJH_11855		+0.8	2.8	galactose/methyl galactoside ABC transporter ATP-binding protein MglA
OLJFJH_02975		+0.8	1.5	ketopantoate reductase
OLJFJH_03155		+0.8	1.2	type VI secretion system contractile sheath small subunit
OLJFJH_02270		+0.8	0.6	Conserved uncharacterized protein
OLJFJH_17730		+0.8	2.0	multidrug/biocide efflux PACE transporter
OLJFJH_08260		+0.8	0.9	DUF2345 domain-containing protein
OLJFJH_17405		+0.8	2.4	ABC transporter permease
OLJFJH_01000		+0.8	1.5	pyruvate dehydrogenase complex transcriptional repressor PdhR
OLJFJH_10550		+0.8	2.3	EAL domain c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)
OLJFJH_01640		+0.8	1.6	UPF0391 membrane protein ETA_06630
OLJFJH_01470		+0.8	1.0	molybdopterin adenylyltransferase
OLJFJH_13810		+0.8	1.7	SDR family oxidoreductase
OLJFJH_15185		+0.8	0.8	GlsB/YeaQ/YmgE family stress response membrane protein
OLJFJH_06330		+0.8	3.3	ECA oligosaccharide polymerase
OLJFJH_13710		+0.7	2.1	thiol peroxidase
OLJFJH_17370		+0.7	1.4	pyridoxamine 5-phosphate oxidase
OLJFJH_13530		+0.7	1.3	HTH-type transcriptional regulator CysB
OLJFJH_17580		+0.7	1.8	protein kinase
OLJFJH_10265		+0.7	1.1	DNA repair protein RecO
OLJFJH_03955		+0.7	2.2	glutathione-regulated potassium-efflux system protein KefB
OLJFJH_11245		+0.7	1.7	DedA family protein
OLJFJH_01515		+0.7	1.4	hypothetical protein
OLJFJH_10700		+0.7	0.6	type IV secretion protein Rhs
OLJFJH_01540		+0.7	1.7	hypothetical protein
OLJFJH_01655		+0.7	1.7	peptide chain release factor 3
OLJFJH_13250		+0.7	0.5	NAD(P)H nitroreductase
OLJFJH_07020		+0.7	1.3	ClpXP protease specificity-enhancing factor
OLJFJH_13745		+0.7	2.0	fimbrial protein
OLJFJH_04160		+0.7	1.5	two-component system response regulator OmpR
OLJFJH_18580		+0.7	1.2	oxalurate catabolism protein HpxZ
OLJFJH_11365		+0.7	1.5	acetate kinase
OLJFJH_17040		+0.7	0.7	replication initiation negative regulator SeqA
OLJFJH_11595		+0.7	1.7	FAD:protein FMN transferase ApbE
OLJFJH_10730		+0.7	1.9	ArsC family reductase
OLJFJH_08510		+0.7	1.1	DUF2884 domain-containing protein
OLJFJH_04975		+0.7	2.0	HTH-type transcriptional regulator
OLJFJH_02970		+0.7	3.2	histidine--tRNA ligase
OLJFJH_06860		+0.7	1.1	50S ribosomal protein L11 methyltransferase
OLJFJH_16705		+0.7	0.8	molybdopterin synthase catalytic subunit MoaE
OLJFJH_14740		+0.7	1.9	Inner membrane protein ydjM
OLJFJH_01370		+0.7	0.9	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
OLJFJH_12555		+0.7	2.1	RNA polymerase sigma factor FliA
OLJFJH_03180		+0.7	1.7	Clostridium P-47 protein
OLJFJH_15065		+0.7	1.6	PrgH/EprH family type III secretion apparatus protein
OLJFJH_12335		+0.7	1.6	nitrogen assimilation transcriptional regulator NAC
OLJFJH_17870		+0.7	0.8	hypothetical protein
OLJFJH_16775		+0.7	1.6	kinase inhibitor
OLJFJH_05250		+0.7	0.9	hypothetical protein
OLJFJH_10530		+0.7	2.5	cold-shock protein
OLJFJH_01520		+0.7	0.8	2 3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB
OLJFJH_18365		+0.7	1.2	Conserved uncharacterized protein
OLJFJH_12755		+0.7	1.6	protein-glutamate O-methyltransferase CheR
OLJFJH_17965		+0.7	1.3	ATP-dependent protease ATP-binding subunit ClpX
OLJFJH_16615		+0.7	2.5	glycosyl transferase
OLJFJH_05595		+0.7	0.9	Protein YjdM
OLJFJH_01915		+0.7	1.1	ribosomal protein S18-alanine N-acetyltransferase
OLJFJH_00490		+0.6	0.5	methionine ABC transporter substrate-binding protein MetQ
OLJFJH_09535		+0.6	1.0	Carrier domain-containing protein
OLJFJH_04620		+0.6	0.5	Inversin
OLJFJH_17090		+0.6	0.8	N-acetylglucosamine-6-phosphate deacetylase
OLJFJH_13615		+0.6	0.7	DUF2931 domain-containing protein
OLJFJH_14725		+0.6	0.6	Endoribonuclease GhoS
OLJFJH_03530		+0.6	0.7	hypothetical protein
OLJFJH_05255		+0.6	1.1	hypothetical protein
OLJFJH_15865		+0.6	0.6	hypothetical protein
OLJFJH_14045		+0.6	0.7	transcriptional regulator
OLJFJH_15035		+0.6	1.7	type III secretion system ATPase SctN
OLJFJH_12960		+0.6	1.9	2OG-Fe dioxygenase family protein
OLJFJH_04595		+0.6	1.5	molybdenum cofactor-independent xanthine hydroxylase subunit HpxD
OLJFJH_05990		+0.6	0.4	hypothetical protein
OLJFJH_08310		+0.6	1.0	hypothetical protein
OLJFJH_07125		+0.6	1.1	lipid asymmetry maintenance protein MlaB

Specific Phenotypes

For 1 genes in this experiment