Experiment set2S564 for Erwinia tracheiphila SCR3

200 most important genes:

gene	name	fitness	t score	description
LU632_RS24845		-4.2	-0.8	hypothetical protein
LU632_RS19960		-2.9	-1.3	hypothetical protein
LU632_RS10685		-2.8	-1.1	hypothetical protein
LU632_RS14505		-2.8	-1.7	hypothetical protein
LU632_RS08335		-2.8	-1.4	phosphoribosylaminoimidazolesuccinocarboxamide synthase
LU632_RS15325		-2.7	-1.7	hypothetical protein
LU632_RS21955		-2.7	-1.5	glycosyltransferase family 4 protein
LU632_RS03890		-2.6	-0.7	hypothetical protein
LU632_RS08785		-2.6	-7.4	glycosyltransferase family 2 protein
LU632_RS05510	speA	-2.6	-1.7	biosynthetic arginine decarboxylase
LU632_RS14950		-2.4	-1.5	class I tRNA ligase family protein
LU632_RS09745		-2.4	-1.7	DNA translocase FtsK 4TM domain-containing protein
LU632_RS11470	asr	-2.4	-2.1	acid resistance repetitive basic protein Asr
LU632_RS12500	pyrF	-2.4	-6.7	orotidine-5'-phosphate decarboxylase
LU632_RS15765		-2.3	-0.7	IS481 family transposase
LU632_RS08925	hisA	-2.3	-2.6	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
LU632_RS24155		-2.3	-2.0	class I adenylate cyclase
LU632_RS06520		-2.3	-2.2	zinc ABC transporter substrate-binding protein
LU632_RS02865	leuD	-2.2	-5.4	3-isopropylmalate dehydratase small subunit
LU632_RS08770		-2.2	-9.5	polysaccharide export protein
LU632_RS16100		-2.2	-4.4	succinate dehydrogenase iron-sulfur subunit
LU632_RS14570		-2.2	-2.1	NUDIX hydrolase
LU632_RS22445	aroE	-2.2	-3.8	shikimate dehydrogenase
LU632_RS08885		-2.2	-5.2	ABC transporter ATP-binding protein
LU632_RS06980		-2.2	-2.0	hypothetical protein
LU632_RS09475	mntR	-2.2	-2.6	manganese-binding transcriptional regulator MntR
LU632_RS15640		-2.2	-1.8	helix-turn-helix domain-containing protein
LU632_RS23035		-2.2	-0.6	helix-turn-helix domain-containing protein
LU632_RS07005		-2.1	-0.9	helix-turn-helix transcriptional regulator
LU632_RS21550		-2.1	-4.3	hypothetical protein
LU632_RS04740		-2.1	-0.5	DNA topoisomerase IV subunit B
LU632_RS14745		-2.1	-0.6	IS5 family transposase
LU632_RS08815		-2.1	-3.6	colanic acid biosynthesis glycosyltransferase WcaL
LU632_RS25375		-2.1	-1.2	hypothetical protein
LU632_RS14130	vsr	-2.0	-2.7	DNA mismatch endonuclease Vsr
LU632_RS19930	rseP	-2.0	-7.3	sigma E protease regulator RseP
LU632_RS12710		-2.0	-0.7	DUF2498 family protein
LU632_RS10690		-2.0	-1.4	hypothetical protein
LU632_RS23310	gltP	-2.0	-0.9	glutamate/aspartate:proton symporter GltP
LU632_RS19610	argB	-2.0	-3.1	acetylglutamate kinase
LU632_RS07865	purF	-2.0	-11.7	amidophosphoribosyltransferase
LU632_RS12925	rssB	-1.9	-1.3	two-component system response regulator RssB
LU632_RS04120	radC	-1.9	-1.9	DNA repair protein RadC
LU632_RS01995		-1.9	-1.5	type VI secretion system tube protein Hcp
LU632_RS20780		-1.9	-0.6	hypothetical protein
LU632_RS22135	glnG	-1.9	-4.8	nitrogen regulation protein NR(I)
LU632_RS04835		-1.9	-1.4	TIGR03758 family integrating conjugative element protein
LU632_RS19615	argC	-1.9	-6.3	N-acetyl-gamma-glutamyl-phosphate reductase
LU632_RS17975	purL	-1.9	-12.0	phosphoribosylformylglycinamidine synthase
LU632_RS08940	hisC	-1.9	-9.7	histidinol-phosphate transaminase
LU632_RS22140	glnL	-1.9	-9.1	nitrogen regulation protein NR(II)
LU632_RS11095		-1.9	-1.0	transposase zinc-binding domain-containing protein
LU632_RS08800		-1.9	-2.6	glycosyltransferase
LU632_RS19440		-1.9	-1.4	IS5 family transposase
LU632_RS08000	nuoI	-1.9	-3.7	NADH-quinone oxidoreductase subunit NuoI
LU632_RS02750	carB	-1.8	-11.6	carbamoyl-phosphate synthase large subunit
LU632_RS20290		-1.8	-1.5	type 1 fimbrial protein
LU632_RS20695	bacA	-1.8	-3.5	undecaprenyl-diphosphate phosphatase
LU632_RS08945	hisD	-1.8	-5.8	histidinol dehydrogenase
LU632_RS04250	yiaK	-1.8	-3.4	3-dehydro-L-gulonate 2-dehydrogenase
LU632_RS14960		-1.8	-1.2	FAD-binding oxidoreductase
LU632_RS06615	ptsI	-1.8	-8.8	phosphoenolpyruvate-protein phosphotransferase PtsI
LU632_RS06610	crr	-1.8	-1.7	PTS glucose transporter subunit IIA
LU632_RS13500		-1.8	-1.6	flagellar protein FlhE
LU632_RS19060		-1.8	-2.2	hypothetical protein
LU632_RS24260	trxA	-1.8	-2.2	thioredoxin TrxA
LU632_RS07775	aroC	-1.8	-3.7	chorismate synthase
LU632_RS13675		-1.8	-1.1	tRNA-Ser
LU632_RS21360	degS	-1.8	-9.3	outer membrane-stress sensor serine endopeptidase DegS
LU632_RS15425	rpoE	-1.8	-7.0	RNA polymerase sigma factor RpoE
LU632_RS05960	sdhE	-1.8	-3.2	FAD assembly factor SdhE
LU632_RS25645	pilP	-1.8	-1.3	type IV pilus biogenesis protein PilP
LU632_RS25495		-1.8	-1.2	type II toxin-antitoxin system MqsA family antitoxin
LU632_RS08780	wzc	-1.8	-9.8	tyrosine-protein kinase Wzc
LU632_RS21755		-1.8	-10.9	adenylosuccinate synthase
LU632_RS08275	purM	-1.8	-5.6	phosphoribosylformylglycinamidine cyclo-ligase
LU632_RS10595		-1.7	-1.5	tail fiber assembly protein
LU632_RS21240	mlaE	-1.7	-3.2	lipid asymmetry maintenance ABC transporter permease subunit MlaE
LU632_RS02065	hflK	-1.7	-2.6	FtsH protease activity modulator HflK
LU632_RS17615		-1.7	-3.0	YejL family protein
LU632_RS02755	carA	-1.7	-6.2	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
LU632_RS11535		-1.7	-3.0	YcjF family protein
LU632_RS17115		-1.7	-1.8	phage tail assembly protein
LU632_RS19450	pitA	-1.7	-2.4	inorganic phosphate transporter PitA
LU632_RS10270		-1.7	-1.5	glucan biosynthesis protein G
LU632_RS23015	glpE	-1.7	-3.3	thiosulfate sulfurtransferase GlpE
LU632_RS09955	pyrD	-1.7	-5.9	quinone-dependent dihydroorotate dehydrogenase
LU632_RS07735		-1.7	-2.3	regulatory protein GemA
LU632_RS23980	tatC	-1.7	-7.2	Sec-independent protein translocase subunit TatC
LU632_RS22090		-1.7	-1.0	pyocin activator PrtN family protein
LU632_RS18995	proC	-1.7	-1.7	pyrroline-5-carboxylate reductase
LU632_RS16850		-1.7	-2.7	MFS transporter
LU632_RS21225	mlaB	-1.7	-3.7	lipid asymmetry maintenance protein MlaB
LU632_RS09195	moaE	-1.7	-0.6	molybdopterin synthase catalytic subunit MoaE
LU632_RS03310		-1.7	-8.4	sucrose-6-phosphate hydrolase
LU632_RS18500	tgt	-1.6	-3.1	tRNA guanosine(34) transglycosylase Tgt
LU632_RS02040	amiB	-1.6	-2.3	N-acetylmuramoyl-L-alanine amidase AmiB
LU632_RS08920	hisF	-1.6	-6.7	imidazole glycerol phosphate synthase subunit HisF
LU632_RS19600	argH	-1.6	-7.3	argininosuccinate lyase
LU632_RS21365	mdh	-1.6	-5.3	malate dehydrogenase
LU632_RS10340	pyrC	-1.6	-6.5	dihydroorotase
LU632_RS19275	ftsE	-1.6	-4.9	cell division ATP-binding protein FtsE
LU632_RS16115	sdhC	-1.6	-6.1	succinate dehydrogenase cytochrome b556 subunit
LU632_RS01015	purD	-1.6	-5.7	phosphoribosylamine--glycine ligase
LU632_RS17320	fruK	-1.6	-2.8	1-phosphofructokinase
LU632_RS18350	tig	-1.6	-4.3	trigger factor
LU632_RS06635	zipA	-1.6	-2.7	cell division protein ZipA
LU632_RS08775		-1.6	-3.4	protein tyrosine phosphatase
LU632_RS08935	hisB	-1.6	-7.6	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
LU632_RS18555		-1.6	-1.5	hypothetical protein
LU632_RS16105	sdhA	-1.6	-7.9	succinate dehydrogenase flavoprotein subunit
LU632_RS21575		-1.6	-3.2	Rpn family recombination-promoting nuclease/putative transposase
LU632_RS16110	sdhD	-1.6	-6.4	succinate dehydrogenase membrane anchor subunit
LU632_RS19585	sthA	-1.6	-8.1	Si-specific NAD(P)(+) transhydrogenase
LU632_RS22150	typA	-1.6	-2.0	ribosome-dependent GTPase TypA
LU632_RS15245	purE	-1.6	-1.7	5-(carboxyamino)imidazole ribonucleotide mutase
LU632_RS22810		-1.6	-8.8	aspartate aminotransferase family protein
LU632_RS20950	pyrB	-1.6	-7.4	aspartate carbamoyltransferase
LU632_RS11085		-1.5	-1.8	hypothetical protein
LU632_RS22015	pyrE	-1.5	-3.8	orotate phosphoribosyltransferase
LU632_RS01465		-1.5	-1.2	hypothetical protein
LU632_RS08880		-1.5	-2.1	ABC transporter permease
LU632_RS08790		-1.5	-5.4	EpsG family protein
LU632_RS08930	hisH	-1.5	-4.9	imidazole glycerol phosphate synthase subunit HisH
LU632_RS01020	purH	-1.5	-4.3	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
LU632_RS02100		-1.5	-9.1	hemolysin family protein
LU632_RS01430		-1.5	-1.0	hypothetical protein
LU632_RS22785		-1.5	-1.8	YheU family protein
LU632_RS12385		-1.5	-3.4	cupin domain-containing protein
LU632_RS12850	cls	-1.5	-1.6	cardiolipin synthase
LU632_RS14665		-1.4	-2.7	IS5/IS1182 family transposase
LU632_RS24880	pstS	-1.4	-2.7	phosphate ABC transporter substrate-binding protein PstS
LU632_RS14010	ldcA	-1.4	-3.3	muramoyltetrapeptide carboxypeptidase
LU632_RS05475		-1.4	-2.4	YqgE/AlgH family protein
LU632_RS22285		-1.4	-0.7	recombinase family protein
LU632_RS19665	ftsN	-1.4	-2.8	cell division protein FtsN
LU632_RS02875	leuB	-1.4	-6.7	3-isopropylmalate dehydrogenase
LU632_RS15250	purK	-1.4	-4.0	5-(carboxyamino)imidazole ribonucleotide synthase
LU632_RS13880		-1.4	-1.8	phage major capsid protein
LU632_RS00695		-1.4	-0.6	fimbria/pilus periplasmic chaperone
LU632_RS02085	cysQ	-1.4	-1.1	3'(2'),5'-bisphosphate nucleotidase CysQ
LU632_RS08950	hisG	-1.4	-6.4	ATP phosphoribosyltransferase
LU632_RS06665		-1.4	-1.6	IS481 family transposase
LU632_RS13085	dsbB	-1.4	-3.9	disulfide bond formation protein DsbB
LU632_RS20980	nrdG	-1.4	-1.8	anaerobic ribonucleoside-triphosphate reductase-activating protein
LU632_RS24405		-1.4	-7.2	branched-chain amino acid transaminase
LU632_RS03735		-1.4	-1.6	DUF1435 domain-containing protein
LU632_RS20175		-1.4	-0.8	hypothetical protein
LU632_RS20900	argF	-1.4	-5.3	ornithine carbamoyltransferase
LU632_RS07580		-1.4	-1.0	DUF1320 domain-containing protein
LU632_RS07975	nuoC	-1.4	-6.8	NADH-quinone oxidoreductase subunit C/D
LU632_RS09795	aroA	-1.4	-6.8	3-phosphoshikimate 1-carboxyvinyltransferase
LU632_RS25470		-1.4	-2.7	DUF1419 domain-containing protein
LU632_RS02870	leuC	-1.4	-7.2	3-isopropylmalate dehydratase large subunit
LU632_RS15200	ybcJ	-1.4	-0.9	ribosome-associated protein YbcJ
LU632_RS06210	argA	-1.4	-5.4	amino-acid N-acetyltransferase
LU632_RS14670		-1.4	-2.6	host specificity protein
LU632_RS26015		-1.4	-3.0	hypothetical protein
LU632_RS08820		-1.4	-5.7	lipopolysaccharide biosynthesis protein
LU632_RS02910	rsmH	-1.4	-4.9	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
LU632_RS22340	psiE	-1.4	-3.4	phosphate-starvation-inducible protein PsiE
LU632_RS16880		-1.3	-0.6	DTW domain-containing protein
LU632_RS09030		-1.3	-1.0	hypothetical protein
LU632_RS07700		-1.3	-2.3	AAA family ATPase
LU632_RS06745		-1.3	-1.0	transposase
LU632_RS00135		-1.3	-0.6	YibL family ribosome-associated protein
LU632_RS11205		-1.3	-2.2	IS4/IS5 family transposase
LU632_RS15730		-1.3	-3.1	recombination regulator RecX
LU632_RS01385		-1.3	-0.7	hypothetical protein
LU632_RS11420		-1.3	-0.9	FNR family transcription factor
LU632_RS00590		-1.3	-1.0	chaperone-modulator protein CbpM
LU632_RS20120		-1.3	-1.4	ABC transporter permease
LU632_RS04270	ulaD	-1.3	-3.7	3-keto-L-gulonate-6-phosphate decarboxylase UlaD
LU632_RS14735		-1.3	-4.2	glycine zipper 2TM domain-containing protein
LU632_RS22980		-1.3	-1.4	phosphoribosyltransferase
LU632_RS20325		-1.3	-2.5	hypothetical protein
LU632_RS12270		-1.3	-1.3	DUF1283 family protein
LU632_RS03545		-1.3	-0.9	hypothetical protein
LU632_RS15445	tyrA	-1.3	-5.9	bifunctional chorismate mutase/prephenate dehydrogenase
LU632_RS02050	miaA	-1.3	-2.0	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
LU632_RS18295		-1.3	-0.4	ISNCY family transposase
LU632_RS20265		-1.3	-1.2	IS630 family transposase
LU632_RS21825		-1.3	-1.6	IS5 family transposase
LU632_RS02060	hflX	-1.3	-3.7	GTPase HflX
LU632_RS02880	leuA	-1.3	-8.0	2-isopropylmalate synthase
LU632_RS16455		-1.3	-1.2	IS630 family transposase
LU632_RS00635		-1.3	-2.3	hypothetical protein
LU632_RS00240		-1.3	-4.3	organic hydroperoxide resistance protein
LU632_RS24035	metR	-1.3	-3.9	HTH-type transcriptional regulator MetR
LU632_RS21085	secG	-1.3	-1.4	preprotein translocase subunit SecG
LU632_RS21875	gpsA	-1.3	-7.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
LU632_RS16340	lptE	-1.2	-1.0	LPS assembly lipoprotein LptE
LU632_RS21880	secB	-1.2	-2.7	protein-export chaperone SecB
LU632_RS24565		-1.2	-0.9	hypothetical protein
LU632_RS13330		-1.2	-1.5	hypothetical protein
LU632_RS17745		-1.2	-2.1	IS481 family transposase
LU632_RS07995	nuoH	-1.2	-3.0	NADH-quinone oxidoreductase subunit NuoH
LU632_RS18875		-1.2	-0.6	IS256 family transposase
LU632_RS21245	mlaF	-1.2	-5.2	phospholipid ABC transporter ATP-binding protein MlaF
LU632_RS12520		-1.2	-1.9	lipopolysaccharide assembly protein LapA domain-containing protein

Specific Phenotypes

None in this experiment

For Erwinia tracheiphila SCR3 in in planta experiments