Experiment set2S563 for Escherichia coli HS(pFamp)R (ATCC 700891)

Compare to:

Control_HSF

200 most important genes:

  gene name fitness t score description  
OHPLBJKB_00077 -3.1 -4.1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
OHPLBJKB_04422 -2.8 -2.6 hypothetical protein compare
OHPLBJKB_04276 -2.4 -1.6 ATP-dependent DNA helicase Rep compare
OHPLBJKB_03543 -2.4 -1.6 Aconitate hydratase B compare
OHPLBJKB_01035 -2.4 -2.7 Protein RecA compare
OHPLBJKB_00071 -2.3 -2.7 Lipopolysaccharide core biosynthesis protein RfaG compare
OHPLBJKB_04273 -2.3 -2.0 Thioredoxin 1 compare
OHPLBJKB_04235 -2.3 -2.2 Magnesium transport protein CorA compare
OHPLBJKB_02484 -2.2 -3.1 Ribosome-binding ATPase YchF compare
OHPLBJKB_00078 -2.1 -3.4 O-antigen ligase compare
OHPLBJKB_03501 -2.0 -4.7 Periplasmic serine endoprotease DegP compare
OHPLBJKB_00210 -1.7 -4.2 Low-affinity inorganic phosphate transporter 1 compare
OHPLBJKB_04239 -1.6 -2.6 Tyrosine recombinase XerC compare
OHPLBJKB_02425 -1.6 -2.4 Protein YciF compare
OHPLBJKB_01429 -1.6 -4.4 NADH-quinone oxidoreductase subunit M compare
OHPLBJKB_02975 -1.6 -2.8 Protein TolR compare
OHPLBJKB_00821 -1.6 -3.5 Tyrosine recombinase XerD compare
OHPLBJKB_01135 -1.6 -2.9 Anti-sigma-E factor RseA compare
OHPLBJKB_00075 -1.6 -2.8 Lipopolysaccharide core heptose(II) kinase RfaY compare
OHPLBJKB_02780 -1.5 -1.9 Thioredoxin reductase compare
OHPLBJKB_01087 -1.5 -3.9 SsrA-binding protein compare
OHPLBJKB_02388 -1.5 -2.9 Peptide transport periplasmic protein SapA compare
OHPLBJKB_03885 -1.5 -5.9 Elongation factor P--(R)-beta-lysine ligase compare
OHPLBJKB_03032 -1.5 -2.1 Ferric uptake regulation protein compare
OHPLBJKB_01652 -1.5 -1.8 hypothetical protein compare
OHPLBJKB_04209 -1.4 -6.5 NAD(P)H-flavin reductase compare
OHPLBJKB_01387 -1.4 -2.6 tRNA pseudouridine synthase A compare
OHPLBJKB_01422 -1.4 -3.7 NADH-quinone oxidoreductase subunit F compare
OHPLBJKB_00316 -1.4 -4.3 DNA adenine methylase compare
OHPLBJKB_03244 -1.4 -2.6 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
OHPLBJKB_02410 -1.4 -3.7 DNA topoisomerase 1 compare
OHPLBJKB_02972 -1.4 -4.7 Peptidoglycan-associated lipoprotein compare
OHPLBJKB_01197 -1.4 -4.8 Outer membrane protein assembly factor BamB compare
OHPLBJKB_00490 -1.4 -3.1 Aerobic respiration control sensor protein ArcB compare
OHPLBJKB_01131 -1.4 -6.6 ATP-dependent RNA helicase SrmB compare
OHPLBJKB_03865 -1.4 -3.2 Adenylosuccinate synthetase compare
OHPLBJKB_00908 -1.3 -2.2 RecBCD enzyme subunit RecC compare
OHPLBJKB_03607 -1.3 -4.5 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 compare
OHPLBJKB_00074 -1.3 -2.6 hypothetical protein compare
OHPLBJKB_02976 -1.3 -3.6 Protein TolQ compare
OHPLBJKB_04247 -1.3 -4.9 Adenylate cyclase compare
OHPLBJKB_02562 -1.3 -2.1 hypothetical protein compare
OHPLBJKB_04088 -1.3 -1.4 Soluble pyridine nucleotide transhydrogenase compare
OHPLBJKB_04427 -1.3 -1.5 hypothetical protein compare
OHPLBJKB_00072 -1.2 -3.7 Lipopolysaccharide core heptose(I) kinase RfaP compare
OHPLBJKB_03943 -1.2 -1.9 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG compare
OHPLBJKB_02496 -1.2 -1.7 Murein tetrapeptide carboxypeptidase compare
OHPLBJKB_00809 -1.2 -2.7 2-octaprenylphenol hydroxylase compare
OHPLBJKB_02991 -1.2 -2.6 2-oxoglutarate dehydrogenase E1 component compare
OHPLBJKB_01641 -1.2 -1.8 dCTP deaminase compare
OHPLBJKB_04204 -1.2 -2.4 Trk system potassium uptake protein TrkH compare
OHPLBJKB_00496 -1.2 -2.8 Nitrogen regulatory protein compare
OHPLBJKB_04388 -1.1 -1.8 hypothetical protein compare
OHPLBJKB_00807 -1.1 -3.2 Xaa-Pro aminopeptidase compare
OHPLBJKB_00314 -1.1 -4.4 3-dehydroquinate synthase compare
OHPLBJKB_01417 -1.1 -1.9 hypothetical protein compare
OHPLBJKB_02974 -1.1 -4.3 Protein TolA compare
OHPLBJKB_00278 -1.1 -4.8 Aerobic glycerol-3-phosphate dehydrogenase compare
OHPLBJKB_00538 -1.1 -3.7 ATP-dependent RNA helicase DeaD compare
OHPLBJKB_03118 -1.1 -1.8 Ferric enterobactin transport ATP-binding protein FepC compare
OHPLBJKB_02475 -1.1 -1.9 Release factor glutamine methyltransferase compare
OHPLBJKB_02031 -1.1 -2.3 3-dehydroquinate dehydratase compare
OHPLBJKB_00298 -1.1 -3.2 Transcriptional regulatory protein OmpR compare
OHPLBJKB_03038 -1.1 -5.4 N-acetylglucosamine-6-phosphate deacetylase compare
OHPLBJKB_01420 -1.1 -3.2 NADH-quinone oxidoreductase subunit C/D compare
OHPLBJKB_02435 -1.0 -1.5 hypothetical protein compare
OHPLBJKB_03234 -1.0 -4.3 Lon protease compare
OHPLBJKB_02973 -1.0 -5.0 Protein TolB compare
OHPLBJKB_01112 -1.0 -3.6 Ribosomal large subunit pseudouridine synthase D compare
OHPLBJKB_01358 -1.0 -2.2 tRNA-Arg compare
OHPLBJKB_04217 -1.0 -2.4 hypothetical protein compare
OHPLBJKB_02504 -1.0 -3.8 Disulfide bond formation protein B compare
OHPLBJKB_04215 -1.0 -1.8 Sec-independent protein translocase protein TatA compare
OHPLBJKB_01428 -1.0 -3.1 NADH-quinone oxidoreductase subunit L compare
OHPLBJKB_03461 -1.0 -2.2 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
OHPLBJKB_00206 -1.0 -2.3 Ribosomal RNA small subunit methyltransferase J compare
OHPLBJKB_00086 -1.0 -5.2 Murein hydrolase activator EnvC compare
OHPLBJKB_01386 -1.0 -2.1 USG-1 protein compare
OHPLBJKB_02482 -1.0 -2.0 hypothetical protein compare
OHPLBJKB_04356 -1.0 -1.1 hypothetical protein compare
OHPLBJKB_00448 -0.9 -1.7 putative membrane protein YhdT compare
OHPLBJKB_04311 -0.9 -3.6 Protein MioC compare
OHPLBJKB_01156 -0.9 -2.4 Serine hydroxymethyltransferase compare
OHPLBJKB_01419 -0.9 -3.9 NADH-quinone oxidoreductase subunit B compare
OHPLBJKB_00438 -0.9 -1.6 hypothetical protein compare
OHPLBJKB_03114 -0.9 -2.6 Ferrienterobactin-binding periplasmic protein compare
OHPLBJKB_00203 -0.9 -5.1 Glutathione reductase compare
OHPLBJKB_04164 -0.9 -1.4 hypothetical protein compare
OHPLBJKB_02578 -0.9 -1.8 Large ribosomal RNA subunit accumulation protein YceD compare
OHPLBJKB_04237 -0.9 -5.5 DNA helicase II compare
OHPLBJKB_03896 -0.9 -4.4 L-lysine 2,3-aminomutase compare
OHPLBJKB_02033 -0.8 -1.5 Inner membrane transport protein YdiN compare
OHPLBJKB_04213 -0.8 -4.5 Sec-independent protein translocase protein TatC compare
OHPLBJKB_04325 -0.8 -3.8 Phosphate-binding protein PstS compare
OHPLBJKB_01696 -0.8 -2.5 Cytoskeleton-binding toxin CbtA compare
OHPLBJKB_03110 -0.8 -1.5 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
OHPLBJKB_00882 -0.8 -1.4 hypothetical protein compare
OHPLBJKB_02650 -0.8 -1.8 Ferrous iron permease EfeU compare
OHPLBJKB_04432 -0.8 -1.7 hypothetical protein compare
OHPLBJKB_00536 -0.8 -4.1 Polyribonucleotide nucleotidyltransferase compare
OHPLBJKB_02400 -0.8 -1.2 putative protein YciH compare
OHPLBJKB_04110 -0.8 -5.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
OHPLBJKB_02709 -0.8 -3.2 Outer membrane protein A compare
OHPLBJKB_03233 -0.8 -3.3 DNA-binding protein HU-beta compare
OHPLBJKB_04060 -0.8 -2.0 Thiazole synthase compare
OHPLBJKB_00880 -0.8 -1.6 hypothetical protein compare
OHPLBJKB_02224 -0.8 -0.9 Glutamate decarboxylase beta compare
OHPLBJKB_01430 -0.8 -2.4 NADH-quinone oxidoreductase subunit N compare
OHPLBJKB_01275 -0.8 -1.4 Ethanolamine utilization protein EutN compare
OHPLBJKB_02471 -0.8 -0.8 Small toxic polypeptide LdrA compare
OHPLBJKB_03687 -0.8 -4.9 Peptide chain release factor RF3 compare
OHPLBJKB_00911 -0.7 -4.4 RecBCD enzyme subunit RecD compare
OHPLBJKB_00422 -0.7 -3.2 Shikimate dehydrogenase (NADP(+)) compare
OHPLBJKB_03606 -0.7 -2.8 Protein ApaG compare
OHPLBJKB_01191 -0.7 -1.6 Nucleoside diphosphate kinase compare
OHPLBJKB_00479 -0.7 -3.2 HTH-type transcriptional repressor NanR compare
OHPLBJKB_02363 -0.7 -3.0 Outer membrane protein G compare
OHPLBJKB_01196 -0.7 -1.6 hypothetical protein compare
OHPLBJKB_03235 -0.7 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
OHPLBJKB_00052 -0.7 -2.1 DNA-directed RNA polymerase subunit omega compare
OHPLBJKB_01027 -0.7 -4.7 Glucitol operon repressor compare
OHPLBJKB_00820 -0.7 -3.0 Flavodoxin 2 compare
OHPLBJKB_03951 -0.7 -2.3 Aminoalkylphosphonate N-acetyltransferase compare
OHPLBJKB_04021 -0.7 -4.9 Glucose-6-phosphate isomerase compare
OHPLBJKB_04004 -0.7 -1.3 Chorismate pyruvate-lyase compare
OHPLBJKB_03095 -0.7 -0.9 Regulator of nucleoside diphosphate kinase compare
OHPLBJKB_02066 -0.7 -2.5 HTH-type transcriptional repressor PurR compare
OHPLBJKB_04429 -0.7 -1.6 hypothetical protein compare
OHPLBJKB_02426 -0.7 -1.7 Protein YciE compare
OHPLBJKB_04327 -0.7 -2.6 Phosphate transport system permease protein PstA compare
OHPLBJKB_00289 -0.7 -2.4 Fe/S biogenesis protein NfuA compare
OHPLBJKB_01944 -0.7 -1.6 hypothetical protein compare
OHPLBJKB_01418 -0.7 -1.0 NAD(P)H-quinone oxidoreductase subunit 3 compare
OHPLBJKB_03864 -0.7 -3.1 HTH-type transcriptional repressor NsrR compare
OHPLBJKB_01668 -0.7 -3.9 hypothetical protein compare
OHPLBJKB_03517 -0.7 -3.4 RNA polymerase-binding transcription factor DksA compare
OHPLBJKB_03082 -0.7 -1.7 Cold shock-like protein CspE compare
OHPLBJKB_01423 -0.7 -3.1 NADH-quinone oxidoreductase subunit G compare
OHPLBJKB_02411 -0.7 -1.6 Protein YciN compare
OHPLBJKB_03258 -0.7 -2.5 Phosphatidylglycerophosphatase A compare
OHPLBJKB_01274 -0.7 -1.2 Ethanolamine utilization protein EutM compare
OHPLBJKB_03889 -0.7 -2.1 Fumarate reductase subunit D compare
OHPLBJKB_01620 -0.7 -1.2 Glucitol operon repressor compare
OHPLBJKB_02534 -0.7 -0.8 Phosphatase NudJ compare
OHPLBJKB_00161 -0.7 -0.8 tRNA-Pro compare
OHPLBJKB_02992 -0.7 -2.4 Succinate dehydrogenase iron-sulfur subunit compare
OHPLBJKB_02977 -0.7 -2.3 Acyl-CoA thioester hydrolase YbgC compare
OHPLBJKB_01045 -0.7 -4.6 Glutamate--cysteine ligase compare
OHPLBJKB_00467 -0.6 -2.9 Arginine repressor compare
OHPLBJKB_02003 -0.6 -1.3 hypothetical protein compare
OHPLBJKB_02854 -0.6 -1.8 putative protein YbiI compare
OHPLBJKB_03642 -0.6 -3.1 Na(+)/H(+) antiporter NhaA compare
OHPLBJKB_01649 -0.6 -3.6 hypothetical protein compare
OHPLBJKB_02767 -0.6 -1.0 Glutathione-regulated potassium-efflux system ancillary protein KefG compare
OHPLBJKB_00471 -0.6 -1.2 Inner membrane protein YhcB compare
OHPLBJKB_03081 -0.6 -2.1 Putative fluoride ion transporter CrcB compare
OHPLBJKB_01528 -0.6 -1.8 putative protein YejG compare
OHPLBJKB_04326 -0.6 -2.2 Phosphate transport system permease protein PstC compare
OHPLBJKB_03122 -0.6 -2.5 Enterochelin esterase compare
OHPLBJKB_01677 -0.6 -1.7 Imidazole glycerol phosphate synthase subunit HisH compare
OHPLBJKB_03605 -0.6 -1.8 Ribosomal RNA small subunit methyltransferase A compare
OHPLBJKB_00631 -0.6 -1.5 Transcriptional regulator YqjI compare
OHPLBJKB_02870 -0.6 -2.4 Deoxyribose operon repressor compare
OHPLBJKB_01138 -0.6 -2.4 Elongation factor 4 compare
OHPLBJKB_03497 -0.6 -0.8 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
OHPLBJKB_00092 -0.6 -1.4 Serine acetyltransferase compare
OHPLBJKB_02339 -0.6 -1.3 hypothetical protein compare
OHPLBJKB_04440 -0.6 -1.7 Transcriptional repressor PifC compare
OHPLBJKB_01305 -0.6 -2.6 Pyridoxine/pyridoxal/pyridoxamine kinase compare
OHPLBJKB_02267 -0.6 -1.2 putative protein YdcY compare
OHPLBJKB_00495 -0.6 -3.5 RNase adapter protein RapZ compare
OHPLBJKB_01857 -0.6 -1.8 tRNA U34 carboxymethyltransferase compare
OHPLBJKB_04423 -0.6 -1.5 Plasmid-derived single-stranded DNA-binding protein compare
OHPLBJKB_03579 -0.6 -2.8 Catabolite repressor/activator compare
OHPLBJKB_02728 -0.6 -2.2 Fimbrial subunit ElfA compare
OHPLBJKB_03236 -0.6 -2.8 ATP-dependent Clp protease proteolytic subunit compare
OHPLBJKB_02607 -0.6 -1.1 putative protein YceO compare
OHPLBJKB_03870 -0.6 -1.7 RNA-binding protein Hfq compare
OHPLBJKB_00089 -0.6 -1.6 Glutaredoxin 3 compare
OHPLBJKB_00676 -0.6 -4.1 Sensor protein QseC compare
OHPLBJKB_03612 -0.6 -1.4 Ferredoxin-like protein FixX compare
OHPLBJKB_01354 -0.6 -2.4 putative multidrug resistance protein EmrY compare
OHPLBJKB_01367 -0.6 -1.6 putative fimbrial-like protein YfcV compare
OHPLBJKB_01671 -0.6 -4.0 D-inositol-3-phosphate glycosyltransferase compare
OHPLBJKB_01207 -0.6 -1.9 hypothetical protein compare
OHPLBJKB_03117 -0.6 -1.6 Ferric enterobactin transport system permease protein FepG compare
OHPLBJKB_03270 -0.6 -2.5 Queuine tRNA-ribosyltransferase compare
OHPLBJKB_04433 -0.5 -0.8 hypothetical protein compare
OHPLBJKB_01894 -0.5 -1.1 hypothetical protein compare
OHPLBJKB_02990 -0.5 -0.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
OHPLBJKB_04001 -0.5 -1.2 Diacylglycerol kinase compare
OHPLBJKB_00458 -0.5 -2.8 Ribonuclease G compare
OHPLBJKB_02290 -0.5 -1.5 hypothetical protein compare
OHPLBJKB_01725 -0.5 -1.1 putative transcriptional regulatory protein YeeN compare
OHPLBJKB_01201 -0.5 -1.8 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 compare
OHPLBJKB_01177 -0.5 -2.1 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11 compare
OHPLBJKB_02248 -0.5 -2.6 Nitrate/nitrite transporter NarU compare
OHPLBJKB_02395 -0.5 -2.3 Exoribonuclease 2 compare
OHPLBJKB_00070 -0.5 -2.9 Lipopolysaccharide core heptosyltransferase RfaQ compare
OHPLBJKB_03743 -0.5 -2.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli HS(pFamp)R (ATCC 700891) in no phage control experiments

For no phage control No phage across organisms