Experiment set2S562 for Bacteroides stercoris CC31F

Compare to:

Sucrose 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
HMPREF1181_RS14140 -9.2 -6.4 3-isopropylmalate dehydratase small subunit compare
HMPREF1181_RS03315 -9.0 -6.2 N-acetylornithine carbamoyltransferase compare
HMPREF1181_RS06570 -8.6 -6.0 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
HMPREF1181_RS00050 -8.5 -10.1 threonine synthase compare
HMPREF1181_RS14125 -8.4 -5.8 3-isopropylmalate dehydrogenase compare
HMPREF1181_RS00165 -8.3 -5.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HMPREF1181_RS04860 -8.1 -9.7 histidinol dehydrogenase compare
HMPREF1181_RS04650 -8.1 -5.6 dihydroorotase compare
HMPREF1181_RS06130 -8.0 -5.5 glutamine-hydrolyzing GMP synthase compare
HMPREF1181_RS14990 -8.0 -5.5 aspartate carbamoyltransferase compare
HMPREF1181_RS03460 -7.9 -5.4 argininosuccinate synthase compare
HMPREF1181_RS03325 -7.8 -10.7 glutamate 5-kinase compare
HMPREF1181_RS03450 -7.8 -7.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
HMPREF1181_RS03445 -7.7 -10.6 aspartate aminotransferase family protein compare
HMPREF1181_RS02880 -7.7 -5.3 M20 family metallo-hydrolase compare
HMPREF1181_RS11065 -7.6 -7.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
HMPREF1181_RS02540 -7.6 -5.2 acetylglutamate kinase compare
HMPREF1181_RS15350 -7.5 -7.3 tryptophan synthase subunit alpha compare
HMPREF1181_RS07435 -7.5 -7.3 IMP dehydrogenase compare
HMPREF1181_RS06575 -7.4 -5.1 prephenate dehydrogenase compare
HMPREF1181_RS11075 -7.4 -11.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
HMPREF1181_RS04850 -7.4 -11.4 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
HMPREF1181_RS00060 -7.4 -7.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
HMPREF1181_RS08595 -7.4 -7.2 aspartate--ammonia ligase compare
HMPREF1181_RS14145 -7.3 -10.1 3-isopropylmalate dehydratase large subunit compare
HMPREF1181_RS03465 -7.3 -5.1 GNAT family N-acetyltransferase compare
HMPREF1181_RS03410 -7.3 -10.1 argininosuccinate lyase compare
HMPREF1181_RS03320 -7.2 -11.9 glutamate-5-semialdehyde dehydrogenase compare
HMPREF1181_RS14150 -7.2 -8.5 2-isopropylmalate synthase compare
HMPREF1181_RS11050 -7.1 -10.9 diaminopimelate decarboxylase compare
HMPREF1181_RS04855 -7.0 -17.0 histidinol-phosphate transaminase compare
HMPREF1181_RS06560 -6.9 -7.5 prephenate dehydratase compare
HMPREF1181_RS06355 -6.9 -4.8 orotidine-5'-phosphate decarboxylase compare
HMPREF1181_RS06565 -6.8 -9.3 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HMPREF1181_RS03440 -6.7 -11.7 pyrroline-5-carboxylate reductase compare
HMPREF1181_RS11070 -6.5 -4.5 imidazole glycerol phosphate synthase subunit HisF compare
HMPREF1181_RS14180 -6.4 -6.2 dihydroorotate dehydrogenase compare
HMPREF1181_RS00055 -6.3 -6.2 cofactor-independent phosphoglycerate mutase compare
HMPREF1181_RS16865 -6.2 -6.0 D-3-phosphoglycerate dehydrogenase compare
HMPREF1181_RS08335 -6.2 -20.5 dihydroxy-acid dehydratase compare
HMPREF1181_RS14185 -6.1 -4.2 dihydroorotate dehydrogenase electron transfer subunit compare
HMPREF1181_RS14085 -6.0 -7.2 adenylosuccinate synthase compare
HMPREF1181_RS08330 -5.9 -18.3 biosynthetic-type acetolactate synthase large subunit compare
HMPREF1181_RS01245 -5.9 -4.1 type II 3-dehydroquinate dehydratase compare
HMPREF1181_RS08325 -5.9 -11.3 acetolactate synthase small subunit compare
HMPREF1181_RS06340 -5.9 -5.9 phosphoribosylformylglycinamidine cyclo-ligase compare
HMPREF1181_RS08315 -5.5 -13.7 ketol-acid reductoisomerase compare
HMPREF1181_RS14995 -5.3 -8.1 aspartate carbamoyltransferase regulatory subunit compare
HMPREF1181_RS07010 -5.2 -3.6 adenylosuccinate lyase compare
HMPREF1181_RS06310 -5.1 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HMPREF1181_RS06320 -5.1 -3.5 shikimate dehydrogenase compare
HMPREF1181_RS02530 -5.0 -5.9 shikimate kinase compare
HMPREF1181_RS03405 -5.0 -3.8 SRPBCC family protein compare
HMPREF1181_RS02275 -4.9 -3.5 4-hydroxy-tetrahydrodipicolinate reductase compare
HMPREF1181_RS15335 -4.8 -7.3 anthranilate phosphoribosyltransferase compare
HMPREF1181_RS11080 -4.6 -9.4 imidazole glycerol phosphate synthase subunit HisH compare
HMPREF1181_RS09265 -4.6 -3.2 3-dehydroquinate synthase compare
HMPREF1181_RS05605 -4.6 -24.9 phosphoribosylformylglycinamidine synthase compare
HMPREF1181_RS01580 -4.6 -13.4 phosphoribosylamine--glycine ligase compare
HMPREF1181_RS15485 -4.5 -8.6 anaerobic ribonucleoside triphosphate reductase compare
HMPREF1181_RS15320 -4.5 -10.0 tryptophan synthase subunit beta compare
HMPREF1181_RS15490 -4.4 -5.2 anaerobic ribonucleoside-triphosphate reductase activating protein compare
HMPREF1181_RS03400 -4.3 -3.0 orotate phosphoribosyltransferase compare
HMPREF1181_RS06865 -4.2 -2.9 branched-chain amino acid aminotransferase compare
HMPREF1181_RS15340 -4.2 -7.0 indole-3-glycerol phosphate synthase TrpC compare
HMPREF1181_RS05800 -4.2 -7.5 hypothetical protein compare
HMPREF1181_RS15345 -4.2 -12.2 phosphoribosylanthranilate isomerase compare
HMPREF1181_RS04865 -4.1 -7.8 ATP phosphoribosyltransferase compare
HMPREF1181_RS09330 -4.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
HMPREF1181_RS15325 -4.1 -13.4 anthranilate synthase component I family protein compare
HMPREF1181_RS08795 -4.0 -13.1 hypothetical protein compare
HMPREF1181_RS11305 -3.8 -8.2 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
HMPREF1181_RS01780 -3.7 -12.4 acetyl-CoA hydrolase/transferase family protein compare
HMPREF1181_RS15010 -3.7 -10.1 serine hydroxymethyltransferase compare
HMPREF1181_RS15330 -3.7 -9.5 aminodeoxychorismate/anthranilate synthase component II compare
HMPREF1181_RS03765 -3.7 -12.5 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1181_RS05890 -3.6 -16.4 glutamine synthetase III compare
HMPREF1181_RS05610 -3.6 -15.2 response regulator compare
HMPREF1181_RS14135 -3.6 -7.5 2-isopropylmalate synthase compare
HMPREF1181_RS05780 -3.6 -4.8 SurA N-terminal domain-containing protein compare
HMPREF1181_RS08190 -3.5 -5.8 cardiolipin synthase compare
HMPREF1181_RS00940 -3.5 -2.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
HMPREF1181_RS07450 -3.5 -6.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HMPREF1181_RS01140 -3.5 -18.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
HMPREF1181_RS04275 -3.5 -11.4 tetratricopeptide repeat protein compare
HMPREF1181_RS06100 -3.4 -12.9 DUF4270 domain-containing protein compare
HMPREF1181_RS00190 -3.4 -2.3 translocation/assembly module TamB domain-containing protein compare
HMPREF1181_RS14610 -3.4 -4.8 DUF4296 domain-containing protein compare
HMPREF1181_RS00185 -3.4 -2.3 BamA/TamA family outer membrane protein compare
HMPREF1181_RS16385 -3.1 -7.2 tetratricopeptide repeat protein compare
HMPREF1181_RS16360 -3.1 -2.2 hypothetical protein compare
HMPREF1181_RS10195 -3.1 -9.8 SMI1/KNR4 family protein compare
HMPREF1181_RS06085 -3.1 -5.5 aspartate 1-decarboxylase compare
HMPREF1181_RS04800 -3.0 -11.6 CDP-alcohol phosphatidyltransferase family protein compare
HMPREF1181_RS01145 -2.9 -10.1 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
HMPREF1181_RS16410 -2.9 -12.8 ATP-dependent Clp protease ATP-binding subunit compare
HMPREF1181_RS06655 -2.8 -3.8 malate dehydrogenase compare
HMPREF1181_RS04815 -2.8 -12.9 inositol-3-phosphate synthase compare
HMPREF1181_RS04810 -2.8 -4.1 phosphatidylglycerophosphatase A compare
HMPREF1181_RS03235 -2.8 -5.2 elongation factor P compare
HMPREF1181_RS05875 -2.8 -3.8 30S ribosomal protein S1 compare
HMPREF1181_RS10835 -2.6 -12.1 tetratricopeptide repeat protein compare
HMPREF1181_RS15095 -2.6 -11.2 UDP-glucose 4-epimerase GalE compare
HMPREF1181_RS04130 -2.6 -18.9 SLBB domain-containing protein compare
HMPREF1181_RS04125 -2.5 -11.5 hypothetical protein compare
HMPREF1181_RS06505 -2.5 -4.1 ribulose-phosphate 3-epimerase compare
HMPREF1181_RS07895 -2.5 -5.0 M23 family metallopeptidase compare
HMPREF1181_RS14790 -2.5 -14.7 alpha amylase C-terminal domain-containing protein compare
HMPREF1181_RS15530 -2.4 -12.9 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1181_RS06930 -2.4 -3.2 tRNA 2-thiouridine(34) synthase MnmA compare
HMPREF1181_RS12535 -2.4 -12.0 GDP-L-fucose synthase compare
HMPREF1181_RS11085 -2.4 -6.7 formyltetrahydrofolate deformylase compare
HMPREF1181_RS14340 -2.4 -6.0 endopeptidase La compare
HMPREF1181_RS16950 -2.4 -11.6 RNA polymerase sigma factor compare
HMPREF1181_RS15460 -2.3 -10.4 Na+/H+ antiporter NhaC family protein compare
HMPREF1181_RS13230 -2.3 -11.1 sodium ion-translocating decarboxylase subunit beta compare
HMPREF1181_RS05665 -2.3 -6.8 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HMPREF1181_RS06660 -2.2 -4.2 hypothetical protein compare
HMPREF1181_RS09130 -2.2 -14.4 magnesium transporter compare
HMPREF1181_RS16620 -2.2 -5.0 YebC/PmpR family DNA-binding transcriptional regulator compare
HMPREF1181_RS03380 -2.1 -7.9 hypothetical protein compare
HMPREF1181_RS15670 -2.1 -2.9 cobalamin biosynthesis protein CobD compare
HMPREF1181_RS04795 -2.1 -12.3 inositol phosphorylceramide synthase compare
HMPREF1181_RS08275 -2.0 -8.9 6-phosphofructokinase compare
HMPREF1181_RS12530 -2.0 -8.5 GDP-mannose 4,6-dehydratase compare
HMPREF1181_RS10580 -2.0 -2.6 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
HMPREF1181_RS01095 -2.0 -11.7 type I DNA topoisomerase compare
HMPREF1181_RS12860 -1.9 -5.4 hypothetical protein compare
HMPREF1181_RS00960 -1.9 -2.9 adenosine kinase compare
HMPREF1181_RS07880 -1.9 -1.6 DUF4290 domain-containing protein compare
HMPREF1181_RS03560 -1.8 -7.6 tRNA-Pro compare
HMPREF1181_RS09350 -1.8 -3.4 immunity 17 family protein compare
HMPREF1181_RS06190 -1.7 -5.1 tetratricopeptide repeat protein compare
HMPREF1181_RS01550 -1.7 -3.0 ribonuclease R compare
HMPREF1181_RS15440 -1.7 -2.7 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HMPREF1181_RS05475 -1.6 -5.0 Rossmann-like and DUF2520 domain-containing protein compare
HMPREF1181_RS01325 -1.6 -10.9 glycosyltransferase compare
HMPREF1181_RS14620 -1.6 -7.0 TraR/DksA C4-type zinc finger protein compare
HMPREF1181_RS15240 -1.6 -5.1 PD-(D/E)XK nuclease family protein compare
HMPREF1181_RS04365 -1.6 -10.2 Gfo/Idh/MocA family oxidoreductase compare
HMPREF1181_RS10610 -1.6 -2.3 ABC transporter substrate-binding protein compare
HMPREF1181_RS06495 -1.5 -2.4 DHH family phosphoesterase compare
HMPREF1181_RS08050 -1.5 -3.1 hypothetical protein compare
HMPREF1181_RS04380 -1.4 -8.2 glycosyltransferase family 2 protein compare
HMPREF1181_RS11825 -1.4 -1.8 hypothetical protein compare
HMPREF1181_RS04370 -1.4 -7.6 glycosyltransferase family 4 protein compare
HMPREF1181_RS01615 -1.4 -5.8 polysaccharide deacetylase family protein compare
HMPREF1181_RS10185 -1.4 -5.3 SMI1/KNR4 family protein compare
HMPREF1181_RS01535 -1.4 -2.8 phosphatase PAP2 family protein compare
HMPREF1181_RS11055 -1.4 -4.1 aspartate kinase compare
HMPREF1181_RS07465 -1.4 -9.2 RNA-binding protein compare
HMPREF1181_RS02865 -1.4 -6.6 tetratricopeptide repeat protein compare
HMPREF1181_RS05660 -1.4 -4.6 ATP-binding protein compare
HMPREF1181_RS04805 -1.3 -3.5 GtrA family protein compare
HMPREF1181_RS15445 -1.3 -3.5 sugar kinase compare
HMPREF1181_RS02535 -1.3 -4.4 biosynthetic arginine decarboxylase compare
HMPREF1181_RS01775 -1.3 -2.7 hypothetical protein compare
HMPREF1181_RS00790 -1.3 -6.4 mannose-1-phosphate guanylyltransferase compare
HMPREF1181_RS04355 -1.3 -5.6 LicD family protein compare
HMPREF1181_RS01570 -1.3 -3.8 RNA methyltransferase compare
HMPREF1181_RS10535 -1.3 -2.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
HMPREF1181_RS11545 -1.3 -3.4 DUF3872 domain-containing protein compare
HMPREF1181_RS08340 -1.3 -2.6 FKBP-type peptidyl-prolyl cis-trans isomerase compare
HMPREF1181_RS04350 -1.3 -5.7 glycosyltransferase compare
HMPREF1181_RS10630 -1.3 -3.4 precorrin-2 C(20)-methyltransferase compare
HMPREF1181_RS13340 -1.3 -8.4 tetratricopeptide repeat protein compare
HMPREF1181_RS04375 -1.3 -5.8 EpsG family protein compare
HMPREF1181_RS07400 -1.2 -8.5 OmpA family protein compare
HMPREF1181_RS15235 -1.2 -2.6 UvrD-helicase domain-containing protein compare
HMPREF1181_RS00420 -1.2 -4.4 type I methionyl aminopeptidase compare
HMPREF1181_RS04400 -1.2 -5.7 polysaccharide biosynthesis protein compare
HMPREF1181_RS02450 -1.2 -1.5 hypothetical protein compare
HMPREF1181_RS04405 -1.2 -4.9 sugar transferase compare
HMPREF1181_RS08990 -1.2 -4.2 TrkH family potassium uptake protein compare
HMPREF1181_RS03470 -1.2 -1.5 arginine repressor compare
HMPREF1181_RS12525 -1.2 -3.2 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
HMPREF1181_RS14245 -1.2 -4.1 agmatine deiminase family protein compare
HMPREF1181_RS16790 -1.2 -6.5 helix-turn-helix domain-containing protein compare
HMPREF1181_RS05470 -1.2 -1.9 HAD-IIIA family hydrolase compare
HMPREF1181_RS14115 -1.2 -7.7 tetratricopeptide repeat protein compare
HMPREF1181_RS07645 -1.2 -5.2 thiamine-phosphate kinase compare
HMPREF1181_RS05670 -1.2 -8.9 substrate-binding domain-containing protein compare
HMPREF1181_RS16955 -1.2 -4.4 trimeric intracellular cation channel family protein compare
HMPREF1181_RS16715 -1.2 -7.9 hypothetical protein compare
HMPREF1181_RS05725 -1.2 -6.8 DUF4831 family protein compare
HMPREF1181_RS16420 -1.1 -9.8 patatin-like phospholipase family protein compare
HMPREF1181_RS14090 -1.1 -2.2 transcriptional repressor compare
HMPREF1181_RS02415 -1.1 -6.8 6-phosphofructokinase compare
HMPREF1181_RS08320 -1.1 -1.9 acyl-[acyl-carrier-protein] thioesterase compare
HMPREF1181_RS14835 -1.1 -6.6 phosphatidylinositol-4-phosphate 5-kinase compare
HMPREF1181_RS00900 -1.1 -1.3 rubredoxin compare
HMPREF1181_RS05685 -1.1 -7.3 DUF4980 domain-containing protein compare
HMPREF1181_RS01255 -1.1 -5.2 tetratricopeptide repeat protein compare
HMPREF1181_RS00235 -1.1 -8.0 TetR/AcrR family transcriptional regulator compare
HMPREF1181_RS13295 -1.0 -5.4 DUF4199 domain-containing protein compare
HMPREF1181_RS04970 -1.0 -5.9 nitrogen-fixing protein NifU compare
HMPREF1181_RS16730 -1.0 -4.7 hypothetical protein compare
HMPREF1181_RS00330 -1.0 -6.2 TolC family protein compare
HMPREF1181_RS07835 -1.0 -5.9 NADP-specific glutamate dehydrogenase compare
HMPREF1181_RS02385 -1.0 -7.5 glycoside hydrolase family 88 protein compare


Specific Phenotypes

None in this experiment

For Bacteroides stercoris CC31F in carbon source experiments

For carbon source Sucrose across organisms