Experiment set2S56 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1

200 most important genes:

  gene name fitness t score description  
OLJFJH_06120 -6.5 -4.0 acetylglutamate kinase compare
OLJFJH_12965 -5.3 -1.7 Lysine exporter LysO compare
OLJFJH_12075 -5.2 -17.7 Amylovoran biosynthesis protein AmsL compare
OLJFJH_12050 -4.9 -3.2 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_12160 -4.8 -0.9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_17720 -4.7 -7.7 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_05615 -4.5 -2.3 Conserved uncharacterized protein compare
OLJFJH_10645 -4.4 -4.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_12070 -4.3 -7.9 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_01400 -4.3 -15.7 carbamoyl phosphate synthase small subunit compare
OLJFJH_06785 -4.2 -16.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_17635 -4.0 -9.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_17630 -3.8 -1.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_01395 -3.8 -15.1 carbamoyl-phosphate synthase large subunit compare
OLJFJH_12040 -3.8 -7.5 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_10590 -3.8 -10.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_12155 -3.7 -6.7 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_11280 -3.7 -14.6 amidophosphoribosyltransferase compare
OLJFJH_06780 -3.6 -15.6 phosphoribosylamine--glycine ligase compare
OLJFJH_06125 -3.6 -12.2 argininosuccinate synthase compare
OLJFJH_09115 -3.6 -12.3 amino-acid N-acetyltransferase compare
OLJFJH_07335 -3.6 -17.2 ornithine carbamoyltransferase compare
OLJFJH_06130 -3.6 -20.0 argininosuccinate lyase compare
OLJFJH_15175 -3.6 -15.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_10305 -3.4 -16.6 phosphoribosylformylglycinamidine synthase compare
OLJFJH_04030 -3.3 -12.3 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_06115 -3.2 -13.1 acetylornithine deacetylase compare
OLJFJH_13570 -3.2 -8.7 orotidine-5'-phosphate decarboxylase compare
OLJFJH_12170 -3.1 -10.0 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_12045 -3.1 -1.8 Amylovoran biosynthesis protein AmsC compare
OLJFJH_12180 -3.1 -17.8 histidinol dehydrogenase compare
OLJFJH_12150 -3.0 -4.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_08880 -2.9 -10.3 diaminopimelate decarboxylase compare
OLJFJH_06105 -2.9 -13.7 methylenetetrahydrofolate reductase compare
OLJFJH_10500 -2.9 -4.3 IMP dehydrogenase compare
OLJFJH_12175 -2.8 -9.7 histidinol-phosphate transaminase compare
OLJFJH_12065 -2.8 -9.8 colanic acid biosynthesis pyruvyl transferase WcaK compare
OLJFJH_12165 -2.8 -7.1 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_15990 -2.8 -7.0 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_06515 -2.7 -1.0 twin-arginine translocase subunit TatA compare
OLJFJH_06480 -2.6 -14.6 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_13350 -2.6 -6.1 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_15670 -2.6 -5.5 dihydroorotase compare
OLJFJH_05495 -2.6 -9.4 nitrogen regulation protein NR(I) compare
OLJFJH_16950 -2.6 -2.2 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_15725 -2.5 -6.3 glucan biosynthesis protein G compare
OLJFJH_13345 -2.5 -2.3 4-oxalomesaconate tautomerase compare
OLJFJH_13470 -2.4 -10.4 tryptophan synthase subunit alpha compare
OLJFJH_01485 -2.4 -10.3 threonine synthase compare
OLJFJH_16980 -2.4 -13.1 citrate synthase compare
OLJFJH_06475 -2.3 -7.1 HTH-type transcriptional regulator MetR compare
OLJFJH_03580 -2.3 -0.9 transcriptional repressor LexA compare
OLJFJH_12035 -2.3 -17.8 Putative tyrosine-protein kinase AmsA compare
OLJFJH_06995 -2.3 -2.5 Z-ring associated protein ZapG compare
OLJFJH_13480 -2.3 -7.9 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_05470 -2.2 -1.2 DNA polymerase I compare
OLJFJH_13475 -2.2 -13.6 tryptophan synthase subunit beta compare
OLJFJH_10215 -2.2 -7.1 RNA polymerase sigma factor RpoE compare
OLJFJH_12030 -2.2 -11.2 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OLJFJH_13355 -2.2 -6.9 4-oxalmesaconate hydratase compare
OLJFJH_13485 -2.1 -4.5 Anthranilate phosphoribosyltransferase compare
OLJFJH_15720 -2.1 -12.8 glucan biosynthesis glucosyltransferase H compare
OLJFJH_06095 -2.1 -11.1 cystathionine gamma-synthase compare
OLJFJH_10860 -2.1 -1.7 phosphocarrier protein Hpr compare
OLJFJH_11230 -2.1 -3.1 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_06225 -2.1 -11.6 branched-chain-amino-acid transaminase compare
OLJFJH_16315 -2.1 -2.8 YbjN domain-containing protein compare
OLJFJH_01300 -2.1 -3.8 3-isopropylmalate dehydratase small subunit compare
OLJFJH_11050 -2.1 -1.9 tRNA-Arg compare
OLJFJH_17775 -2.1 -9.4 EamA-like transporter family compare
OLJFJH_10855 -2.0 -10.2 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_05990 -2.0 -0.7 hypothetical protein compare
OLJFJH_12885 -2.0 -5.9 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_14150 -2.0 -0.7 osmotically-inducible lipoprotein B compare
OLJFJH_17130 -2.0 -0.7 tRNA-Gln compare
OLJFJH_15515 -2.0 -5.7 aminodeoxychorismate lyase compare
OLJFJH_12025 -2.0 -12.4 Amylovoran export outer membrane protein AmsH compare
OLJFJH_06535 -2.0 -5.3 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_02090 -2.0 -9.7 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_03650 -2.0 -9.1 homoserine O-succinyltransferase compare
OLJFJH_16935 -1.9 -9.1 succinate--CoA ligase subunit alpha compare
OLJFJH_06245 -1.9 -13.6 ketol-acid reductoisomerase compare
OLJFJH_13885 -1.9 -2.6 hypothetical protein compare
OLJFJH_07675 -1.9 -9.0 outer membrane channel protein TolC compare
OLJFJH_01290 -1.9 -13.4 3-isopropylmalate dehydrogenase compare
OLJFJH_12185 -1.9 -5.0 ATP phosphoribosyltransferase compare
OLJFJH_05770 -1.9 -3.7 orotate phosphoribosyltransferase compare
OLJFJH_08735 -1.9 -7.5 phosphoglycerate dehydrogenase compare
OLJFJH_01295 -1.9 -11.0 3-isopropylmalate dehydratase large subunit compare
OLJFJH_07330 -1.9 -8.1 aspartate carbamoyltransferase compare
OLJFJH_04080 -1.8 -3.0 adenine-specific DNA-methyltransferase compare
OLJFJH_09310 -1.8 -6.1 phosphoadenylyl-sulfate reductase compare
OLJFJH_01490 -1.8 -8.3 homoserine kinase compare
OLJFJH_12105 -1.8 -1.9 ABC transporter permease compare
OLJFJH_01595 -1.8 -4.0 phosphoserine phosphatase compare
OLJFJH_02085 -1.8 -1.3 transcriptional regulator GutM compare
OLJFJH_10220 -1.7 -0.6 anti-sigma-E factor RseA compare
OLJFJH_10660 -1.7 -0.9 hypothetical protein compare
OLJFJH_09375 -1.7 -7.1 murein hydrolase activator NlpD compare
OLJFJH_16940 -1.7 -5.0 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_08875 -1.7 -7.6 LysR family transcriptional regulator compare
OLJFJH_17850 -1.6 -10.1 efflux transporter periplasmic adaptor subunit compare
OLJFJH_13120 -1.6 -1.2 septum site-determining protein MinC compare
OLJFJH_02410 -1.6 -4.1 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_17855 -1.6 -9.8 multidrug efflux RND transporter permease subunit AcrB compare
OLJFJH_08795 -1.6 -8.6 hydrolase compare
OLJFJH_16965 -1.6 -2.9 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_07185 -1.6 -3.3 transcription elongation factor GreA compare
OLJFJH_17880 -1.6 -1.2 transcriptional regulator compare
OLJFJH_16780 -1.5 -3.1 6-phosphogluconolactonase compare
OLJFJH_05000 -1.5 -0.7 YibL family ribosome-associated protein compare
OLJFJH_13495 -1.5 -9.2 anthranilate synthase component 1 compare
OLJFJH_12850 -1.5 -1.3 crossover junction endodeoxyribonuclease RuvC compare
OLJFJH_01285 -1.5 -8.5 2-isopropylmalate synthase compare
OLJFJH_01370 -1.5 -2.0 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_04910 -1.5 -0.7 hypothetical protein compare
OLJFJH_07060 -1.5 -4.2 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_18015 -1.5 -3.5 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_04620 -1.5 -0.8 Inversin compare
OLJFJH_09390 -1.5 -0.5 Transposase compare
OLJFJH_06985 -1.5 -8.2 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_07070 -1.5 -6.9 RNA polymerase factor sigma-54 compare
OLJFJH_11450 -1.4 -3.6 NADH-quinone oxidoreductase subunit J compare
OLJFJH_06230 -1.4 -9.5 dihydroxy-acid dehydratase compare
OLJFJH_16180 -1.4 -5.1 cell division protein FtsK compare
OLJFJH_06525 -1.4 -1.9 Sec-independent protein translocase subunit TatC compare
OLJFJH_18265 -1.4 -0.7 YaiA compare
OLJFJH_16955 -1.4 -1.9 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_04305 -1.4 -0.6 DUF2756 domain-containing protein compare
OLJFJH_05955 -1.4 -7.9 6-phosphofructokinase compare
OLJFJH_13645 -1.4 -6.9 peptide ABC transporter ATP-binding protein SapD compare
OLJFJH_05730 -1.4 -0.4 hypothetical protein compare
OLJFJH_05510 -1.3 -4.3 ribosome-dependent GTPase TypA compare
OLJFJH_12120 -1.3 -1.1 UDP-galactopyranose mutase compare
OLJFJH_05835 -1.3 -2.4 glycosyl transferase compare
OLJFJH_06640 -1.3 -1.6 elongation factor Tu compare
OLJFJH_11430 -1.3 -5.7 NADH-quinone oxidoreductase subunit NuoF compare
OLJFJH_00815 -1.3 -2.6 hypoxanthine phosphoribosyltransferase compare
OLJFJH_03725 -1.3 -9.2 Trk system potassium transporter TrkA compare
OLJFJH_09445 -1.3 -0.8 AraC family transcriptional regulator compare
OLJFJH_04160 -1.3 -2.7 two-component system response regulator OmpR compare
OLJFJH_16450 -1.3 -1.4 DksA/TraR family C4-type zinc finger protein compare
OLJFJH_10865 -1.3 -0.8 cysteine synthase A compare
OLJFJH_03260 -1.3 -5.2 translation factor (SUA5) compare
OLJFJH_13440 -1.3 -1.4 TonB system transport protein TonB compare
OLJFJH_00745 -1.3 -4.7 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_18020 -1.3 -2.1 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_16430 -1.3 -0.5 hypothetical protein compare
OLJFJH_05850 -1.2 -7.1 deacetylase compare
OLJFJH_18010 -1.2 -4.5 cytochrome o ubiquinol oxidase subunit I compare
OLJFJH_08305 -1.2 -0.6 hypothetical protein compare
OLJFJH_07030 -1.2 -10.0 glutamate synthase large subunit compare
OLJFJH_10165 -1.2 -1.0 RnfH family protein compare
OLJFJH_12670 -1.2 -7.6 flippase compare
OLJFJH_05500 -1.2 -6.1 nitrogen regulation protein NR(II) compare
OLJFJH_11440 -1.2 -2.6 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_13650 -1.2 -4.7 peptide ABC transporter permease SapC compare
OLJFJH_13655 -1.2 -6.7 putrescine ABC transporter permease SapB compare
OLJFJH_05860 -1.2 -3.1 glycosyl transferase compare
OLJFJH_07025 -1.2 -6.3 sulfite reductase subunit alpha compare
OLJFJH_05630 -1.2 -1.0 sce7726 family protein compare
OLJFJH_16610 -1.2 -1.0 protein YohO compare
OLJFJH_16960 -1.2 -4.1 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_04155 -1.1 -3.0 two-component system sensor histidine kinase EnvZ compare
OLJFJH_01380 -1.1 -3.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
OLJFJH_06235 -1.1 -7.4 threonine ammonia-lyase biosynthetic compare
OLJFJH_09305 -1.1 -4.7 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_09065 -1.1 -1.0 thymidylate synthase compare
OLJFJH_07275 -1.1 -1.9 DEAD/DEAH family ATP-dependent RNA helicase compare
OLJFJH_15450 -1.1 -5.0 Glycine zipper 2TM domain-containing protein compare
OLJFJH_07190 -1.1 -1.8 ribosome assembly RNA-binding protein YhbY compare
OLJFJH_17830 -1.1 -1.7 prephenate dehydrogenase compare
OLJFJH_16040 -1.1 -5.7 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_11455 -1.1 -0.5 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_01870 -1.1 -4.3 Type VI secretion system core protein compare
OLJFJH_10200 -1.1 -4.8 ATP-dependent RNA helicase SrmB compare
OLJFJH_04370 -1.1 -3.4 permease-like cell division protein FtsX compare
OLJFJH_10720 -1.1 -0.7 Uncharacterised protein family (UPF0370) compare
OLJFJH_12930 -1.1 -1.3 DNA polymerase III subunit theta compare
OLJFJH_03945 -1.1 -0.6 peptidylprolyl isomerase compare
OLJFJH_14465 -1.0 -1.4 hypothetical protein compare
OLJFJH_13490 -1.0 -1.6 anthranilate synthase component II compare
OLJFJH_00645 -1.0 -0.9 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
OLJFJH_16190 -1.0 -3.8 thioredoxin-disulfide reductase compare
OLJFJH_06735 -1.0 -5.4 thiamine phosphate synthase compare
OLJFJH_09335 -1.0 -4.0 Adenylyl-sulfate kinase compare
OLJFJH_18485 -1.0 -1.7 methylthioribulose 1-phosphate dehydratase compare
OLJFJH_04935 -1.0 -0.4 Transcriptional regulator compare
OLJFJH_11775 -1.0 -3.6 1-phosphofructokinase compare
OLJFJH_11425 -1.0 -1.2 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_07820 -1.0 -6.7 cystathionine beta-lyase compare
OLJFJH_14185 -1.0 -1.2 selenoprotein W-related protein compare
OLJFJH_14950 -1.0 -4.4 redox-regulated ATPase YchF compare
OLJFJH_13865 -1.0 -1.6 Peptidoglycan/LPS O-acetylase OafA/YrhL contains acyltransferase and SGNH-hydrolase domains compare
OLJFJH_18095 -1.0 -2.1 transcriptional regulator NrdR compare
OLJFJH_10850 -1.0 -1.4 PTS glucose transporter subunit IIA compare
OLJFJH_11415 -1.0 -5.3 NADH-quinone oxidoreductase subunit B compare
OLJFJH_09315 -1.0 -1.1 YCII domain-containing protein compare
OLJFJH_13660 -1.0 -6.1 peptide ABC transporter substrate-binding protein SapA compare
OLJFJH_17040 -0.9 -1.0 replication initiation negative regulator SeqA compare


Specific Phenotypes

For 1 genes in this experiment