Experiment set2S557 for Bacteroides stercoris CC31F

Compare to:

D-Galactose 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
HMPREF1181_RS03315 -8.7 -6.0 N-acetylornithine carbamoyltransferase compare
HMPREF1181_RS03445 -8.7 -6.0 aspartate aminotransferase family protein compare
HMPREF1181_RS00050 -8.2 -9.7 threonine synthase compare
HMPREF1181_RS06560 -7.8 -5.4 prephenate dehydratase compare
HMPREF1181_RS03450 -7.7 -5.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
HMPREF1181_RS03460 -7.5 -5.2 argininosuccinate synthase compare
HMPREF1181_RS14140 -7.4 -5.1 3-isopropylmalate dehydratase small subunit compare
HMPREF1181_RS06570 -7.3 -10.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
HMPREF1181_RS02880 -7.3 -5.1 M20 family metallo-hydrolase compare
HMPREF1181_RS03410 -7.3 -7.1 argininosuccinate lyase compare
HMPREF1181_RS01245 -7.3 -4.6 type II 3-dehydroquinate dehydratase compare
HMPREF1181_RS02540 -7.2 -5.0 acetylglutamate kinase compare
HMPREF1181_RS00060 -7.0 -6.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
HMPREF1181_RS06575 -7.0 -4.9 prephenate dehydrogenase compare
HMPREF1181_RS11050 -7.0 -10.7 diaminopimelate decarboxylase compare
HMPREF1181_RS03465 -7.0 -4.8 GNAT family N-acetyltransferase compare
HMPREF1181_RS14990 -6.9 -9.5 aspartate carbamoyltransferase compare
HMPREF1181_RS00165 -6.9 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HMPREF1181_RS14150 -6.8 -8.1 2-isopropylmalate synthase compare
HMPREF1181_RS07435 -6.7 -9.2 IMP dehydrogenase compare
HMPREF1181_RS14995 -6.7 -10.3 aspartate carbamoyltransferase regulatory subunit compare
HMPREF1181_RS11065 -6.7 -8.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
HMPREF1181_RS04860 -6.6 -13.5 histidinol dehydrogenase compare
HMPREF1181_RS03320 -6.6 -11.8 glutamate-5-semialdehyde dehydrogenase compare
HMPREF1181_RS11075 -6.4 -13.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
HMPREF1181_RS03325 -6.4 -13.0 glutamate 5-kinase compare
HMPREF1181_RS06565 -6.4 -8.8 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HMPREF1181_RS14145 -6.3 -12.8 3-isopropylmalate dehydratase large subunit compare
HMPREF1181_RS04855 -6.2 -17.1 histidinol-phosphate transaminase compare
HMPREF1181_RS08595 -6.2 -10.4 aspartate--ammonia ligase compare
HMPREF1181_RS16865 -6.2 -4.3 D-3-phosphoglycerate dehydrogenase compare
HMPREF1181_RS14125 -6.2 -11.9 3-isopropylmalate dehydrogenase compare
HMPREF1181_RS15350 -6.1 -8.9 tryptophan synthase subunit alpha compare
HMPREF1181_RS03440 -6.1 -9.3 pyrroline-5-carboxylate reductase compare
HMPREF1181_RS04850 -6.0 -10.6 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
HMPREF1181_RS02530 -5.9 -4.1 shikimate kinase compare
HMPREF1181_RS15490 -5.9 -5.7 anaerobic ribonucleoside-triphosphate reductase activating protein compare
HMPREF1181_RS00055 -5.7 -7.8 cofactor-independent phosphoglycerate mutase compare
HMPREF1181_RS11070 -5.5 -6.5 imidazole glycerol phosphate synthase subunit HisF compare
HMPREF1181_RS06355 -5.3 -10.8 orotidine-5'-phosphate decarboxylase compare
HMPREF1181_RS15095 -5.1 -11.4 UDP-glucose 4-epimerase GalE compare
HMPREF1181_RS06130 -4.8 -9.7 glutamine-hydrolyzing GMP synthase compare
HMPREF1181_RS15340 -4.7 -6.5 indole-3-glycerol phosphate synthase TrpC compare
HMPREF1181_RS04445 -4.7 -11.1 galactokinase compare
HMPREF1181_RS06320 -4.7 -3.1 shikimate dehydrogenase compare
HMPREF1181_RS10195 -4.6 -11.6 SMI1/KNR4 family protein compare
HMPREF1181_RS14085 -4.6 -9.8 adenylosuccinate synthase compare
HMPREF1181_RS15485 -4.6 -7.9 anaerobic ribonucleoside triphosphate reductase compare
HMPREF1181_RS08315 -4.6 -12.5 ketol-acid reductoisomerase compare
HMPREF1181_RS15335 -4.6 -7.6 anthranilate phosphoribosyltransferase compare
HMPREF1181_RS08335 -4.4 -21.6 dihydroxy-acid dehydratase compare
HMPREF1181_RS04650 -4.3 -9.0 dihydroorotase compare
HMPREF1181_RS06505 -4.2 -2.9 ribulose-phosphate 3-epimerase compare
HMPREF1181_RS09265 -4.2 -2.9 3-dehydroquinate synthase compare
HMPREF1181_RS08330 -4.2 -14.5 biosynthetic-type acetolactate synthase large subunit compare
HMPREF1181_RS04440 -4.2 -7.0 MFS transporter compare
HMPREF1181_RS06660 -4.2 -5.0 hypothetical protein compare
HMPREF1181_RS15345 -4.2 -12.0 phosphoribosylanthranilate isomerase compare
HMPREF1181_RS16950 -4.2 -11.9 RNA polymerase sigma factor compare
HMPREF1181_RS08050 -4.1 -3.2 hypothetical protein compare
HMPREF1181_RS15320 -4.0 -10.1 tryptophan synthase subunit beta compare
HMPREF1181_RS03400 -3.9 -2.7 orotate phosphoribosyltransferase compare
HMPREF1181_RS13340 -3.9 -14.6 tetratricopeptide repeat protein compare
HMPREF1181_RS16410 -3.8 -15.8 ATP-dependent Clp protease ATP-binding subunit compare
HMPREF1181_RS06865 -3.8 -2.6 branched-chain amino acid aminotransferase compare
HMPREF1181_RS09330 -3.7 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
HMPREF1181_RS06310 -3.7 -4.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HMPREF1181_RS07010 -3.6 -8.3 adenylosuccinate lyase compare
HMPREF1181_RS07450 -3.6 -6.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HMPREF1181_RS08795 -3.5 -13.0 hypothetical protein compare
HMPREF1181_RS03405 -3.5 -3.9 SRPBCC family protein compare
HMPREF1181_RS10835 -3.4 -11.4 tetratricopeptide repeat protein compare
HMPREF1181_RS05875 -3.3 -3.6 30S ribosomal protein S1 compare
HMPREF1181_RS14185 -3.3 -11.7 dihydroorotate dehydrogenase electron transfer subunit compare
HMPREF1181_RS12530 -3.2 -11.8 GDP-mannose 4,6-dehydratase compare
HMPREF1181_RS08325 -3.2 -7.5 acetolactate synthase small subunit compare
HMPREF1181_RS06340 -3.1 -3.9 phosphoribosylformylglycinamidine cyclo-ligase compare
HMPREF1181_RS04865 -3.1 -3.9 ATP phosphoribosyltransferase compare
HMPREF1181_RS01140 -3.1 -16.6 2-oxoacid:acceptor oxidoreductase subunit alpha compare
HMPREF1181_RS01145 -3.1 -8.2 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
HMPREF1181_RS15325 -3.0 -10.6 anthranilate synthase component I family protein compare
HMPREF1181_RS14180 -3.0 -6.3 dihydroorotate dehydrogenase compare
HMPREF1181_RS05725 -3.0 -7.7 DUF4831 family protein compare
HMPREF1181_RS01580 -3.0 -10.3 phosphoribosylamine--glycine ligase compare
HMPREF1181_RS00190 -3.0 -2.1 translocation/assembly module TamB domain-containing protein compare
HMPREF1181_RS00900 -3.0 -1.9 rubredoxin compare
HMPREF1181_RS00185 -3.0 -2.0 BamA/TamA family outer membrane protein compare
HMPREF1181_RS05610 -2.9 -11.3 response regulator compare
HMPREF1181_RS06930 -2.9 -2.0 tRNA 2-thiouridine(34) synthase MnmA compare
HMPREF1181_RS14340 -2.9 -6.1 endopeptidase La compare
HMPREF1181_RS05800 -2.8 -7.0 hypothetical protein compare
HMPREF1181_RS16385 -2.7 -6.1 tetratricopeptide repeat protein compare
HMPREF1181_RS02385 -2.7 -11.6 glycoside hydrolase family 88 protein compare
HMPREF1181_RS12535 -2.7 -10.1 GDP-L-fucose synthase compare
HMPREF1181_RS11080 -2.7 -6.8 imidazole glycerol phosphate synthase subunit HisH compare
HMPREF1181_RS14135 -2.7 -6.4 2-isopropylmalate synthase compare
HMPREF1181_RS01780 -2.7 -14.4 acetyl-CoA hydrolase/transferase family protein compare
HMPREF1181_RS01095 -2.7 -12.5 type I DNA topoisomerase compare
HMPREF1181_RS14245 -2.6 -4.7 agmatine deiminase family protein compare
HMPREF1181_RS15330 -2.6 -8.8 aminodeoxychorismate/anthranilate synthase component II compare
HMPREF1181_RS08340 -2.6 -4.8 FKBP-type peptidyl-prolyl cis-trans isomerase compare
HMPREF1181_RS05605 -2.6 -17.6 phosphoribosylformylglycinamidine synthase compare
HMPREF1181_RS14610 -2.5 -4.3 DUF4296 domain-containing protein compare
HMPREF1181_RS01325 -2.5 -14.3 glycosyltransferase compare
HMPREF1181_RS06545 -2.5 -7.4 single-stranded-DNA-specific exonuclease RecJ compare
HMPREF1181_RS06085 -2.5 -5.2 aspartate 1-decarboxylase compare
HMPREF1181_RS02535 -2.5 -10.0 biosynthetic arginine decarboxylase compare
HMPREF1181_RS14620 -2.4 -9.2 TraR/DksA C4-type zinc finger protein compare
HMPREF1181_RS16790 -2.4 -6.6 helix-turn-helix domain-containing protein compare
HMPREF1181_RS11900 -2.4 -7.6 saccharopine dehydrogenase family protein compare
HMPREF1181_RS05780 -2.4 -4.8 SurA N-terminal domain-containing protein compare
HMPREF1181_RS01255 -2.4 -7.9 tetratricopeptide repeat protein compare
HMPREF1181_RS11175 -2.4 -5.5 pirin family protein compare
HMPREF1181_RS07880 -2.3 -1.6 DUF4290 domain-containing protein compare
HMPREF1181_RS09130 -2.3 -14.2 magnesium transporter compare
HMPREF1181_RS00940 -2.3 -2.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
HMPREF1181_RS03765 -2.3 -13.4 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1181_RS16500 -2.3 -10.3 carboxynorspermidine decarboxylase compare
HMPREF1181_RS11305 -2.2 -7.5 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
HMPREF1181_RS07445 -2.2 -7.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
HMPREF1181_RS01615 -2.2 -5.7 polysaccharide deacetylase family protein compare
HMPREF1181_RS04275 -2.1 -9.8 tetratricopeptide repeat protein compare
HMPREF1181_RS01315 -2.1 -12.7 hypothetical protein compare
HMPREF1181_RS02275 -2.1 -2.8 4-hydroxy-tetrahydrodipicolinate reductase compare
HMPREF1181_RS06655 -2.1 -2.6 malate dehydrogenase compare
HMPREF1181_RS15445 -2.1 -3.3 sugar kinase compare
HMPREF1181_RS14790 -2.1 -12.8 alpha amylase C-terminal domain-containing protein compare
HMPREF1181_RS14235 -2.1 -4.5 carbon-nitrogen hydrolase compare
HMPREF1181_RS03235 -2.1 -4.9 elongation factor P compare
HMPREF1181_RS10720 -2.1 -8.1 nitronate monooxygenase compare
HMPREF1181_RS13230 -2.1 -10.0 sodium ion-translocating decarboxylase subunit beta compare
HMPREF1181_RS17255 -2.1 -1.9 hypothetical protein compare
HMPREF1181_RS08190 -2.1 -5.0 cardiolipin synthase compare
HMPREF1181_RS07510 -2.0 -7.1 DUF177 domain-containing protein compare
HMPREF1181_RS05665 -2.0 -5.7 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HMPREF1181_RS11825 -2.0 -3.1 hypothetical protein compare
HMPREF1181_RS11545 -1.9 -3.3 DUF3872 domain-containing protein compare
HMPREF1181_RS01305 -1.9 -14.1 N-acetylneuraminate synthase family protein compare
HMPREF1181_RS01320 -1.9 -11.9 glycosyltransferase compare
HMPREF1181_RS06100 -1.9 -9.2 DUF4270 domain-containing protein compare
HMPREF1181_RS04130 -1.9 -15.1 SLBB domain-containing protein compare
HMPREF1181_RS04125 -1.9 -10.2 hypothetical protein compare
HMPREF1181_RS05890 -1.8 -11.7 glutamine synthetase III compare
HMPREF1181_RS00960 -1.8 -2.6 adenosine kinase compare
HMPREF1181_RS07465 -1.8 -10.6 RNA-binding protein compare
HMPREF1181_RS00685 -1.7 -12.3 DEAD/DEAH box helicase compare
HMPREF1181_RS16590 -1.7 -3.3 elongation factor 4 compare
HMPREF1181_RS15010 -1.7 -8.0 serine hydroxymethyltransferase compare
HMPREF1181_RS01310 -1.7 -8.1 NTP transferase domain-containing protein compare
HMPREF1181_RS06190 -1.7 -3.1 tetratricopeptide repeat protein compare
HMPREF1181_RS16445 -1.7 -7.5 GNAT family N-acetyltransferase compare
HMPREF1181_RS01730 -1.7 -7.6 class I SAM-dependent methyltransferase compare
HMPREF1181_RS01240 -1.6 -1.4 pyruvate kinase compare
HMPREF1181_RS06635 -1.6 -2.6 biopolymer transporter ExbD compare
HMPREF1181_RS15440 -1.5 -2.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HMPREF1181_RS05315 -1.5 -5.2 copper resistance protein NlpE N-terminal domain-containing protein compare
HMPREF1181_RS04435 -1.5 -6.8 galactose mutarotase compare
HMPREF1181_RS07400 -1.5 -7.5 OmpA family protein compare
HMPREF1181_RS00790 -1.5 -6.3 mannose-1-phosphate guanylyltransferase compare
HMPREF1181_RS15240 -1.5 -5.1 PD-(D/E)XK nuclease family protein compare
HMPREF1181_RS00265 -1.5 -7.1 23S ribosomal RNA compare
HMPREF1181_RS04800 -1.5 -8.1 CDP-alcohol phosphatidyltransferase family protein compare
HMPREF1181_RS01775 -1.5 -3.3 hypothetical protein compare
HMPREF1181_RS03560 -1.5 -7.0 tRNA-Pro compare
HMPREF1181_RS08265 -1.5 -3.3 (d)CMP kinase compare
HMPREF1181_RS16455 -1.4 -2.4 recombination protein RecR compare
HMPREF1181_RS01550 -1.4 -2.4 ribonuclease R compare
HMPREF1181_RS16730 -1.4 -6.8 hypothetical protein compare
HMPREF1181_RS07640 -1.4 -5.2 purine-nucleoside phosphorylase compare
HMPREF1181_RS00875 -1.4 -6.7 CPBP family intramembrane metalloprotease compare
HMPREF1181_RS17520 -1.3 -1.4 transposase compare
HMPREF1181_RS03190 -1.3 -5.3 CidA/LrgA family protein compare
HMPREF1181_RS04815 -1.3 -8.4 inositol-3-phosphate synthase compare
HMPREF1181_RS07380 -1.3 -10.2 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit compare
HMPREF1181_RS09150 -1.3 -5.2 ribosome silencing factor compare
HMPREF1181_RS05620 -1.3 -2.7 chromate transporter compare
HMPREF1181_RS15530 -1.3 -9.1 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1181_RS10185 -1.3 -4.1 SMI1/KNR4 family protein compare
HMPREF1181_RS03470 -1.3 -1.7 arginine repressor compare
HMPREF1181_RS01135 -1.3 -2.5 tRNA-Arg compare
HMPREF1181_RS04810 -1.3 -2.7 phosphatidylglycerophosphatase A compare
HMPREF1181_RS03750 -1.3 -5.8 hypothetical protein compare
HMPREF1181_RS07645 -1.2 -5.0 thiamine-phosphate kinase compare
HMPREF1181_RS12645 -1.2 -3.1 hypothetical protein compare
HMPREF1181_RS08785 -1.2 -5.6 S9 family peptidase compare
HMPREF1181_RS15120 -1.2 -1.9 electron transport complex subunit RsxC compare
HMPREF1181_RS16955 -1.2 -2.3 trimeric intracellular cation channel family protein compare
HMPREF1181_RS10695 -1.2 -6.2 MFS transporter compare
HMPREF1181_RS01535 -1.2 -2.5 phosphatase PAP2 family protein compare
HMPREF1181_RS03380 -1.2 -4.5 hypothetical protein compare
HMPREF1181_RS02070 -1.1 -3.3 DNA polymerase I compare
HMPREF1181_RS00020 -1.1 -2.8 mechanosensitive ion channel compare
HMPREF1181_RS02865 -1.1 -5.7 tetratricopeptide repeat protein compare
HMPREF1181_RS12345 -1.1 -4.7 pyruvate formate lyase-activating protein compare
HMPREF1181_RS15875 -1.1 -1.8 hypothetical protein compare
HMPREF1181_RS15115 -1.1 -1.8 RnfABCDGE type electron transport complex subunit D compare
HMPREF1181_RS02000 -1.1 -1.4 redox-regulated ATPase YchF compare
HMPREF1181_RS16620 -1.1 -1.9 YebC/PmpR family DNA-binding transcriptional regulator compare
HMPREF1181_RS16420 -1.1 -9.9 patatin-like phospholipase family protein compare
HMPREF1181_RS03185 -1.1 -6.7 LrgB family protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Galactose in Bacteroides stercoris CC31F

For carbon source D-Galactose across organisms