Experiment set2S540 for Erwinia tracheiphila SCR3

Compare to:

Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

200 most important genes:

  gene name fitness t score description  
LU632_RS15245 purE -6.3 -2.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
LU632_RS23980 tatC -5.8 -8.8 Sec-independent protein translocase subunit TatC compare
LU632_RS15425 rpoE -5.6 -9.4 RNA polymerase sigma factor RpoE compare
LU632_RS25495 -5.6 -1.4 type II toxin-antitoxin system MqsA family antitoxin compare
LU632_RS21085 secG -5.6 -2.3 preprotein translocase subunit SecG compare
LU632_RS16115 sdhC -5.4 -5.2 succinate dehydrogenase cytochrome b556 subunit compare
LU632_RS21755 -5.2 -5.0 adenylosuccinate synthase compare
LU632_RS07865 purF -5.2 -9.9 amidophosphoribosyltransferase compare
LU632_RS08785 -5.0 -3.4 glycosyltransferase family 2 protein compare
LU632_RS09955 pyrD -4.9 -3.4 quinone-dependent dihydroorotate dehydrogenase compare
LU632_RS21360 degS -4.9 -9.9 outer membrane-stress sensor serine endopeptidase DegS compare
LU632_RS08815 -4.7 -3.2 colanic acid biosynthesis glycosyltransferase WcaL compare
LU632_RS08275 purM -4.5 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
LU632_RS08775 -4.5 -3.1 protein tyrosine phosphatase compare
LU632_RS16110 sdhD -4.5 -6.1 succinate dehydrogenase membrane anchor subunit compare
LU632_RS21240 mlaE -4.4 -4.3 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
LU632_RS08790 -4.4 -6.0 EpsG family protein compare
LU632_RS20950 pyrB -4.4 -3.0 aspartate carbamoyltransferase compare
LU632_RS02750 carB -4.4 -3.0 carbamoyl-phosphate synthase large subunit compare
LU632_RS06615 ptsI -4.4 -6.7 phosphoenolpyruvate-protein phosphotransferase PtsI compare
LU632_RS21245 mlaF -4.3 -6.6 phospholipid ABC transporter ATP-binding protein MlaF compare
LU632_RS09475 mntR -4.3 -3.3 manganese-binding transcriptional regulator MntR compare
LU632_RS01180 -4.3 -1.0 hypothetical protein compare
LU632_RS17975 purL -4.1 -8.8 phosphoribosylformylglycinamidine synthase compare
LU632_RS10340 pyrC -4.1 -2.8 dihydroorotase compare
LU632_RS15640 -4.1 -2.0 helix-turn-helix domain-containing protein compare
LU632_RS19585 sthA -4.1 -11.3 Si-specific NAD(P)(+) transhydrogenase compare
LU632_RS08780 wzc -4.0 -8.6 tyrosine-protein kinase Wzc compare
LU632_RS24155 -4.0 -1.9 class I adenylate cyclase compare
LU632_RS22140 glnL -4.0 -10.6 nitrogen regulation protein NR(II) compare
LU632_RS19615 argC -3.9 -6.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
LU632_RS02755 carA -3.9 -9.8 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
LU632_RS22810 -3.9 -9.0 aspartate aminotransferase family protein compare
LU632_RS08820 -3.9 -2.7 lipopolysaccharide biosynthesis protein compare
LU632_RS19930 rseP -3.9 -3.7 sigma E protease regulator RseP compare
LU632_RS01015 purD -3.8 -2.6 phosphoribosylamine--glycine ligase compare
LU632_RS16105 sdhA -3.8 -6.9 succinate dehydrogenase flavoprotein subunit compare
LU632_RS21235 mlaD -3.8 -7.1 outer membrane lipid asymmetry maintenance protein MlaD compare
LU632_RS08770 -3.8 -5.1 polysaccharide export protein compare
LU632_RS02865 leuD -3.7 -8.2 3-isopropylmalate dehydratase small subunit compare
LU632_RS03310 -3.7 -13.7 sucrose-6-phosphate hydrolase compare
LU632_RS04250 yiaK -3.7 -4.7 3-dehydro-L-gulonate 2-dehydrogenase compare
LU632_RS21875 gpsA -3.7 -10.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
LU632_RS02100 -3.7 -10.6 hemolysin family protein compare
LU632_RS08885 -3.7 -5.5 ABC transporter ATP-binding protein compare
LU632_RS21230 mlaC -3.6 -4.2 phospholipid-binding protein MlaC compare
LU632_RS21955 -3.5 -1.5 glycosyltransferase family 4 protein compare
LU632_RS12500 pyrF -3.5 -5.3 orotidine-5'-phosphate decarboxylase compare
LU632_RS17615 -3.5 -3.3 YejL family protein compare
LU632_RS08880 -3.5 -2.8 ABC transporter permease compare
LU632_RS15250 purK -3.4 -4.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
LU632_RS17320 fruK -3.4 -4.3 1-phosphofructokinase compare
LU632_RS19665 ftsN -3.4 -2.3 cell division protein FtsN compare
LU632_RS02870 leuC -3.4 -13.2 3-isopropylmalate dehydratase large subunit compare
LU632_RS22135 glnG -3.4 -5.9 nitrogen regulation protein NR(I) compare
LU632_RS14010 ldcA -3.4 -2.3 muramoyltetrapeptide carboxypeptidase compare
LU632_RS16100 -3.4 -4.0 succinate dehydrogenase iron-sulfur subunit compare
LU632_RS06635 zipA -3.4 -3.4 cell division protein ZipA compare
LU632_RS17820 ndk -3.3 -2.7 nucleoside-diphosphate kinase compare
LU632_RS19610 argB -3.3 -3.1 acetylglutamate kinase compare
LU632_RS17205 -3.3 -1.4 Arc family DNA-binding protein compare
LU632_RS01320 crcB -3.3 -2.7 fluoride efflux transporter CrcB compare
LU632_RS08800 -3.3 -1.7 glycosyltransferase compare
LU632_RS24205 rffM -3.1 -12.4 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
LU632_RS21225 mlaB -3.1 -3.7 lipid asymmetry maintenance protein MlaB compare
LU632_RS02875 leuB -3.1 -11.8 3-isopropylmalate dehydrogenase compare
LU632_RS00525 -3.1 -2.4 IpaD/SipD/SspD family type III secretion system needle tip protein compare
LU632_RS08335 -3.1 -1.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
LU632_RS16415 tatE -3.1 -0.7 twin-arginine translocase subunit TatE compare
LU632_RS20780 -3.1 -0.7 hypothetical protein compare
LU632_RS01090 rnhA -3.1 -1.5 ribonuclease HI compare
LU632_RS23985 tatB -3.0 -4.6 Sec-independent protein translocase protein TatB compare
LU632_RS20270 -3.0 -0.7 IS5 family transposase compare
LU632_RS18420 -3.0 -1.0 LysE family translocator compare
LU632_RS22015 pyrE -3.0 -2.0 orotate phosphoribosyltransferase compare
LU632_RS14835 plsX -2.9 -4.1 phosphate acyltransferase PlsX compare
LU632_RS07775 aroC -2.9 -5.1 chorismate synthase compare
LU632_RS22960 feoA -2.9 -0.7 ferrous iron transporter A compare
LU632_RS19620 argE -2.9 -2.8 acetylornithine deacetylase compare
LU632_RS19275 ftsE -2.9 -4.4 cell division ATP-binding protein FtsE compare
LU632_RS13085 dsbB -2.9 -6.0 disulfide bond formation protein DsbB compare
LU632_RS02140 -2.9 -2.9 ribosome-associated protein compare
LU632_RS10270 -2.9 -2.3 glucan biosynthesis protein G compare
LU632_RS18875 -2.9 -1.0 IS256 family transposase compare
LU632_RS15095 -2.8 -1.8 Cro/CI family transcriptional regulator compare
LU632_RS08945 hisD -2.8 -5.9 histidinol dehydrogenase compare
LU632_RS05510 speA -2.8 -1.5 biosynthetic arginine decarboxylase compare
LU632_RS24405 -2.8 -10.7 branched-chain amino acid transaminase compare
LU632_RS02465 -2.8 -0.7 IS256 family transposase compare
LU632_RS23310 gltP -2.8 -1.0 glutamate/aspartate:proton symporter GltP compare
LU632_RS18500 tgt -2.8 -3.8 tRNA guanosine(34) transglycosylase Tgt compare
LU632_RS02880 leuA -2.8 -11.7 2-isopropylmalate synthase compare
LU632_RS08930 hisH -2.8 -8.4 imidazole glycerol phosphate synthase subunit HisH compare
LU632_RS09745 -2.8 -1.3 DNA translocase FtsK 4TM domain-containing protein compare
LU632_RS07300 mlaA -2.7 -6.2 phospholipid-binding lipoprotein MlaA compare
LU632_RS07990 nuoG -2.7 -5.9 NADH-quinone oxidoreductase subunit NuoG compare
LU632_RS06040 lysA -2.7 -7.9 diaminopimelate decarboxylase compare
LU632_RS08920 hisF -2.7 -6.0 imidazole glycerol phosphate synthase subunit HisF compare
LU632_RS07970 -2.6 -8.0 NADH-quinone oxidoreductase subunit B compare
LU632_RS07720 -2.6 -3.1 hypothetical protein compare
LU632_RS11470 asr -2.6 -2.1 acid resistance repetitive basic protein Asr compare
LU632_RS09795 aroA -2.6 -10.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
LU632_RS06610 crr -2.6 -1.5 PTS glucose transporter subunit IIA compare
LU632_RS05515 speB -2.6 -1.9 agmatinase compare
LU632_RS08000 nuoI -2.6 -4.0 NADH-quinone oxidoreductase subunit NuoI compare
LU632_RS20900 argF -2.6 -8.7 ornithine carbamoyltransferase compare
LU632_RS19270 ftsX -2.5 -12.0 permease-like cell division protein FtsX compare
LU632_RS19600 argH -2.5 -7.3 argininosuccinate lyase compare
LU632_RS06905 -2.5 -1.0 excisionase compare
LU632_RS08015 nuoL -2.5 -7.7 NADH-quinone oxidoreductase subunit L compare
LU632_RS26015 -2.4 -5.3 hypothetical protein compare
LU632_RS12850 cls -2.4 -1.6 cardiolipin synthase compare
LU632_RS02065 hflK -2.4 -1.6 FtsH protease activity modulator HflK compare
LU632_RS12940 purU -2.3 -11.0 formyltetrahydrofolate deformylase compare
LU632_RS08035 -2.3 -10.7 glucan biosynthesis protein D compare
LU632_RS07975 nuoC -2.3 -9.1 NADH-quinone oxidoreductase subunit C/D compare
LU632_RS24840 kup -2.3 -8.5 low affinity potassium transporter Kup compare
LU632_RS24250 wecA -2.3 -11.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
LU632_RS01020 purH -2.3 -1.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
LU632_RS04600 -2.3 -1.1 hypothetical protein compare
LU632_RS07985 nuoF -2.3 -5.6 NADH-quinone oxidoreductase subunit NuoF compare
LU632_RS07965 -2.3 -6.0 NADH-quinone oxidoreductase subunit A compare
LU632_RS02910 rsmH -2.3 -7.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
LU632_RS02615 thrB -2.3 -1.6 homoserine kinase compare
LU632_RS20545 metC -2.3 -8.9 cystathionine beta-lyase compare
LU632_RS04190 -2.2 -1.3 hypothetical protein compare
LU632_RS21365 mdh -2.2 -4.0 malate dehydrogenase compare
LU632_RS17785 bamB -2.2 -3.9 outer membrane protein assembly factor BamB compare
LU632_RS16480 -2.2 -5.1 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
LU632_RS08805 -2.2 -11.0 phage tailspike protein compare
LU632_RS12910 -2.2 -1.5 NAD-dependent epimerase compare
LU632_RS12925 rssB -2.2 -1.1 two-component system response regulator RssB compare
LU632_RS19470 prlC -2.1 -4.0 oligopeptidase A compare
LU632_RS16575 -2.1 -2.1 hypothetical protein compare
LU632_RS26110 -2.1 -4.6 ParA family protein compare
LU632_RS08025 nuoN -2.1 -4.4 NADH-quinone oxidoreductase subunit NuoN compare
LU632_RS08010 nuoK -2.1 -2.0 NADH-quinone oxidoreductase subunit NuoK compare
LU632_RS06210 argA -2.1 -5.6 amino-acid N-acetyltransferase compare
LU632_RS22865 aroB -2.1 -2.8 3-dehydroquinate synthase compare
LU632_RS09705 clpA -2.1 -8.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
LU632_RS12325 -2.1 -2.2 H-NS histone family protein compare
LU632_RS16090 odhB -2.0 -1.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
LU632_RS18120 -2.0 -1.8 hypothetical protein compare
LU632_RS15905 galT -2.0 -4.0 galactose-1-phosphate uridylyltransferase compare
LU632_RS12520 -2.0 -2.6 lipopolysaccharide assembly protein LapA domain-containing protein compare
LU632_RS07045 -2.0 -0.9 hypothetical protein compare
LU632_RS22935 envZ -2.0 -3.6 two-component system sensor histidine kinase EnvZ compare
LU632_RS17325 fruB -2.0 -7.0 fused PTS fructose transporter subunit IIA/HPr protein compare
LU632_RS07980 nuoE -2.0 -0.9 NADH-quinone oxidoreductase subunit NuoE compare
LU632_RS02060 hflX -2.0 -4.8 GTPase HflX compare
LU632_RS25545 -2.0 -2.3 helix-turn-helix domain-containing protein compare
LU632_RS08925 hisA -2.0 -2.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
LU632_RS08190 apbE -2.0 -1.2 FAD:protein FMN transferase ApbE compare
LU632_RS14375 -2.0 -0.8 excisionase compare
LU632_RS02610 thrA -1.9 -5.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
LU632_RS05225 -1.9 -1.7 hypothetical protein compare
LU632_RS19360 -1.9 -1.1 hypothetical protein compare
LU632_RS08915 hisIE -1.9 -4.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
LU632_RS22940 ompR -1.9 -4.4 two-component system response regulator OmpR compare
LU632_RS17645 -1.9 -0.6 hypothetical protein compare
LU632_RS03300 -1.9 -9.9 carbohydrate porin compare
LU632_RS14735 -1.9 -5.0 glycine zipper 2TM domain-containing protein compare
LU632_RS21930 -1.9 -7.8 glycosyltransferase compare
LU632_RS24385 ilvC -1.9 -4.9 ketol-acid reductoisomerase compare
LU632_RS21260 kdsC -1.9 -4.1 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
LU632_RS21880 secB -1.9 -3.4 protein-export chaperone SecB compare
LU632_RS24240 wecB -1.9 -6.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
LU632_RS08850 rfbB -1.9 -2.3 dTDP-glucose 4,6-dehydratase compare
LU632_RS08935 hisB -1.9 -6.4 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
LU632_RS17420 -1.8 -1.2 phosphatidylinositol-specific phospholipase C domain-containing protein compare
LU632_RS19450 pitA -1.8 -1.8 inorganic phosphate transporter PitA compare
LU632_RS06410 -1.8 -1.1 phosphoadenylyl-sulfate reductase compare
LU632_RS07995 nuoH -1.8 -3.7 NADH-quinone oxidoreductase subunit NuoH compare
LU632_RS24215 -1.8 -5.4 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
LU632_RS08940 hisC -1.8 -7.4 histidinol-phosphate transaminase compare
LU632_RS05390 -1.8 -9.6 ornithine decarboxylase compare
LU632_RS25000 -1.8 -1.4 DUF3164 family protein compare
LU632_RS22150 typA -1.8 -1.2 ribosome-dependent GTPase TypA compare
LU632_RS20790 -1.8 -1.2 tyrosine-type recombinase/integrase compare
LU632_RS11455 rstA -1.8 -6.2 two-component system response regulator RstA compare
LU632_RS10690 -1.8 -1.3 hypothetical protein compare
LU632_RS03305 -1.8 -5.7 sucrose-specific PTS transporter subunit IIBC compare
LU632_RS16490 arnC -1.8 -8.3 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
LU632_RS06520 -1.8 -2.1 zinc ABC transporter substrate-binding protein compare
LU632_RS04255 -1.8 -2.5 YhcH/YjgK/YiaL family protein compare
LU632_RS08645 -1.8 -2.3 T3SS effector OspC family protein compare
LU632_RS01680 -1.7 -1.7 GpE family phage tail protein compare
LU632_RS19605 -1.7 -4.4 argininosuccinate synthase compare
LU632_RS05960 sdhE -1.7 -2.2 FAD assembly factor SdhE compare
LU632_RS00895 tuf -1.7 -4.5 elongation factor Tu compare
LU632_RS08020 nuoM -1.7 -5.5 NADH-quinone oxidoreductase subunit M compare
LU632_RS13115 minC -1.7 -5.7 septum site-determining protein MinC compare
LU632_RS07740 -1.7 -1.5 phage transcriptional regulator compare
LU632_RS21895 envC -1.7 -6.9 murein hydrolase activator EnvC compare
LU632_RS02070 hflC -1.7 -2.4 protease modulator HflC compare
LU632_RS24890 pstA -1.7 -1.2 phosphate ABC transporter permease PstA compare
LU632_RS16485 arnA -1.7 -7.7 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA compare
LU632_RS02475 prfC -1.7 -8.0 peptide chain release factor 3 compare
LU632_RS24400 ilvD -1.7 -6.6 dihydroxy-acid dehydratase compare
LU632_RS00070 -1.7 -1.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment