Experiment set2S54 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

200 most important genes:

  gene name fitness t score description  
OLJFJH_06120 -6.8 -5.2 acetylglutamate kinase compare
OLJFJH_07335 -5.9 -19.7 ornithine carbamoyltransferase compare
OLJFJH_09115 -5.5 -17.1 amino-acid N-acetyltransferase compare
OLJFJH_06125 -5.5 -14.1 argininosuccinate synthase compare
OLJFJH_01400 -5.5 -18.2 carbamoyl phosphate synthase small subunit compare
OLJFJH_15175 -5.5 -17.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_06115 -5.4 -12.6 acetylornithine deacetylase compare
OLJFJH_01395 -5.4 -17.4 carbamoyl-phosphate synthase large subunit compare
OLJFJH_06130 -5.4 -21.5 argininosuccinate lyase compare
OLJFJH_05615 -5.4 -3.3 Conserved uncharacterized protein compare
OLJFJH_04030 -4.9 -17.6 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_08880 -4.6 -13.0 diaminopimelate decarboxylase compare
OLJFJH_12045 -4.4 -2.8 Amylovoran biosynthesis protein AmsC compare
OLJFJH_06105 -4.4 -19.2 methylenetetrahydrofolate reductase compare
OLJFJH_06480 -4.3 -17.2 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_06785 -4.2 -19.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_06475 -4.1 -8.9 HTH-type transcriptional regulator MetR compare
OLJFJH_15555 -4.0 -2.3 23S rRNA accumulation protein YceD compare
OLJFJH_11280 -4.0 -15.3 amidophosphoribosyltransferase compare
OLJFJH_12075 -4.0 -18.5 Amylovoran biosynthesis protein AmsL compare
OLJFJH_17720 -3.7 -9.7 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_06780 -3.7 -17.4 phosphoribosylamine--glycine ligase compare
OLJFJH_17630 -3.7 -1.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_10645 -3.7 -6.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_05510 -3.6 -6.1 ribosome-dependent GTPase TypA compare
OLJFJH_01485 -3.6 -12.8 threonine synthase compare
OLJFJH_10590 -3.6 -10.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_01300 -3.5 -6.5 3-isopropylmalate dehydratase small subunit compare
OLJFJH_12065 -3.5 -15.2 colanic acid biosynthesis pyruvyl transferase WcaK compare
OLJFJH_12040 -3.4 -9.4 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_12070 -3.4 -9.5 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_05635 -3.3 -2.7 beta family protein compare
OLJFJH_17635 -3.3 -11.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_16950 -3.2 -3.8 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_10500 -3.2 -6.8 IMP dehydrogenase compare
OLJFJH_10305 -3.2 -17.0 phosphoribosylformylglycinamidine synthase compare
OLJFJH_01290 -3.1 -21.6 3-isopropylmalate dehydrogenase compare
OLJFJH_13470 -3.1 -11.0 tryptophan synthase subunit alpha compare
OLJFJH_13475 -3.0 -15.2 tryptophan synthase subunit beta compare
OLJFJH_08875 -3.0 -11.8 LysR family transcriptional regulator compare
OLJFJH_12165 -3.0 -7.6 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_01295 -3.0 -11.9 3-isopropylmalate dehydratase large subunit compare
OLJFJH_03580 -3.0 -1.4 transcriptional repressor LexA compare
OLJFJH_17775 -2.9 -11.4 EamA-like transporter family compare
OLJFJH_15990 -2.8 -8.7 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_02410 -2.8 -6.6 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_12050 -2.7 -4.1 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_15670 -2.7 -8.4 dihydroorotase compare
OLJFJH_10860 -2.6 -2.8 phosphocarrier protein Hpr compare
OLJFJH_13345 -2.6 -5.0 4-oxalomesaconate tautomerase compare
OLJFJH_01490 -2.6 -10.4 homoserine kinase compare
OLJFJH_07820 -2.5 -17.7 cystathionine beta-lyase compare
OLJFJH_13350 -2.5 -6.4 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_05470 -2.5 -2.5 DNA polymerase I compare
OLJFJH_13355 -2.5 -9.5 4-oxalmesaconate hydratase compare
OLJFJH_12035 -2.5 -19.5 Putative tyrosine-protein kinase AmsA compare
OLJFJH_12175 -2.4 -12.4 histidinol-phosphate transaminase compare
OLJFJH_12180 -2.4 -15.1 histidinol dehydrogenase compare
OLJFJH_09065 -2.4 -1.6 thymidylate synthase compare
OLJFJH_13480 -2.4 -8.9 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_08795 -2.4 -12.9 hydrolase compare
OLJFJH_06095 -2.3 -9.4 cystathionine gamma-synthase compare
OLJFJH_15725 -2.3 -9.0 glucan biosynthesis protein G compare
OLJFJH_12030 -2.3 -13.5 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OLJFJH_13570 -2.3 -8.7 orotidine-5'-phosphate decarboxylase compare
OLJFJH_05180 -2.3 -1.2 membrane protein insertion efficiency factor YidD compare
OLJFJH_12170 -2.3 -6.7 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_12160 -2.3 -1.2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_12155 -2.3 -6.4 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_06245 -2.3 -14.9 ketol-acid reductoisomerase compare
OLJFJH_12150 -2.2 -5.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_15720 -2.2 -14.4 glucan biosynthesis glucosyltransferase H compare
OLJFJH_13530 -2.1 -2.8 HTH-type transcriptional regulator CysB compare
OLJFJH_13485 -2.1 -6.7 Anthranilate phosphoribosyltransferase compare
OLJFJH_00955 -2.1 -8.1 Zn-dependent oxidoreductase compare
OLJFJH_12025 -2.1 -12.8 Amylovoran export outer membrane protein AmsH compare
OLJFJH_01595 -2.1 -6.4 phosphoserine phosphatase compare
OLJFJH_05630 -2.0 -1.9 sce7726 family protein compare
OLJFJH_11230 -2.0 -3.3 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_08735 -2.0 -10.7 phosphoglycerate dehydrogenase compare
OLJFJH_03450 -2.0 -5.3 aromatic amino acid aminotransferase compare
OLJFJH_09310 -2.0 -10.2 phosphoadenylyl-sulfate reductase compare
OLJFJH_06525 -2.0 -3.2 Sec-independent protein translocase subunit TatC compare
OLJFJH_11670 -2.0 -1.2 Tyrosine recombinase xerD compare
OLJFJH_01285 -2.0 -10.6 2-isopropylmalate synthase compare
OLJFJH_05835 -1.9 -4.6 glycosyl transferase compare
OLJFJH_04080 -1.9 -4.0 adenine-specific DNA-methyltransferase compare
OLJFJH_06225 -1.9 -11.7 branched-chain-amino-acid transaminase compare
OLJFJH_12110 -1.9 -2.7 sugar ABC transporter ATP-binding protein compare
OLJFJH_06230 -1.8 -13.0 dihydroxy-acid dehydratase compare
OLJFJH_10855 -1.8 -12.8 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_04160 -1.8 -4.1 two-component system response regulator OmpR compare
OLJFJH_06535 -1.8 -6.5 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_13510 -1.8 -6.5 23S rRNA pseudouridine(2605) synthase RluB compare
OLJFJH_13115 -1.8 -3.2 septum site-determining protein MinD compare
OLJFJH_18025 -1.8 -4.0 heme o synthase compare
OLJFJH_04305 -1.8 -1.0 DUF2756 domain-containing protein compare
OLJFJH_03260 -1.8 -7.2 translation factor (SUA5) compare
OLJFJH_12885 -1.8 -7.4 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_11050 -1.7 -2.2 tRNA-Arg compare
OLJFJH_05495 -1.7 -9.0 nitrogen regulation protein NR(I) compare
OLJFJH_14195 -1.7 -2.0 hypothetical protein compare
OLJFJH_01495 -1.6 -11.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
OLJFJH_03650 -1.6 -9.2 homoserine O-succinyltransferase compare
OLJFJH_15515 -1.6 -6.9 aminodeoxychorismate lyase compare
OLJFJH_16040 -1.6 -8.3 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_16965 -1.6 -3.3 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_02970 -1.6 -5.6 histidine--tRNA ligase compare
OLJFJH_02090 -1.6 -8.1 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_12965 -1.6 -1.9 Lysine exporter LysO compare
OLJFJH_05770 -1.6 -4.3 orotate phosphoribosyltransferase compare
OLJFJH_03710 -1.6 -0.7 peptide deformylase compare
OLJFJH_11625 -1.5 -4.6 Conserved uncharacterized protein compare
OLJFJH_05870 -1.5 -6.7 lipopolysaccharide biosynthesis protein compare
OLJFJH_16955 -1.5 -2.8 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_05860 -1.5 -6.8 glycosyl transferase compare
OLJFJH_10230 -1.5 -3.9 SoxR-reducing system protein RseC compare
OLJFJH_01370 -1.5 -2.5 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_10200 -1.5 -6.8 ATP-dependent RNA helicase SrmB compare
OLJFJH_13495 -1.4 -8.7 anthranilate synthase component 1 compare
OLJFJH_13120 -1.4 -1.8 septum site-determining protein MinC compare
OLJFJH_01770 -1.4 -7.6 hypothetical protein compare
OLJFJH_09305 -1.4 -5.6 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_18015 -1.4 -4.2 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_03945 -1.4 -1.0 peptidylprolyl isomerase compare
OLJFJH_13585 -1.4 -1.2 hypothetical protein compare
OLJFJH_09105 -1.4 -3.7 exodeoxyribonuclease V subunit alpha compare
OLJFJH_07330 -1.4 -8.3 aspartate carbamoyltransferase compare
OLJFJH_11595 -1.4 -4.9 FAD:protein FMN transferase ApbE compare
OLJFJH_17850 -1.3 -8.4 efflux transporter periplasmic adaptor subunit compare
OLJFJH_14495 -1.3 -7.5 ribonuclease T compare
OLJFJH_17855 -1.3 -9.6 multidrug efflux RND transporter permease subunit AcrB compare
OLJFJH_05955 -1.3 -8.1 6-phosphofructokinase compare
OLJFJH_07675 -1.3 -6.7 outer membrane channel protein TolC compare
OLJFJH_03170 -1.3 -0.8 hypothetical protein compare
OLJFJH_16185 -1.3 -1.6 leucine-responsive transcriptional regulator Lrp compare
OLJFJH_06415 -1.3 -4.4 tyrosine recombinase XerC compare
OLJFJH_06975 -1.2 -2.7 transcriptional regulator ArgR compare
OLJFJH_09375 -1.2 -5.7 murein hydrolase activator NlpD compare
OLJFJH_10850 -1.2 -3.2 PTS glucose transporter subunit IIA compare
OLJFJH_16780 -1.2 -3.2 6-phosphogluconolactonase compare
OLJFJH_08835 -1.2 -2.2 site-specific tyrosine recombinase XerD compare
OLJFJH_13335 -1.2 -1.0 heme-binding protein compare
OLJFJH_00815 -1.2 -3.4 hypoxanthine phosphoribosyltransferase compare
OLJFJH_05910 -1.2 -7.7 protein-export chaperone SecB compare
OLJFJH_18020 -1.2 -2.5 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_06320 -1.2 -4.5 lipid III flippase WzxE compare
OLJFJH_10165 -1.2 -1.5 RnfH family protein compare
OLJFJH_01835 -1.2 -2.9 T6SS amidase immunity protein Tai4 family protein compare
OLJFJH_09590 -1.1 -1.4 carbon storage regulator CsrA compare
OLJFJH_14370 -1.1 -1.2 electron transport complex subunit RsxC compare
OLJFJH_15450 -1.1 -5.4 Glycine zipper 2TM domain-containing protein compare
OLJFJH_09575 -1.1 -2.5 recombinase RecA compare
OLJFJH_07320 -1.1 -3.3 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_17340 -1.1 -1.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
OLJFJH_05915 -1.1 -7.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
OLJFJH_07275 -1.1 -2.1 DEAD/DEAH family ATP-dependent RNA helicase compare
OLJFJH_12185 -1.1 -3.8 ATP phosphoribosyltransferase compare
OLJFJH_10585 -1.0 -7.9 phosphoribosylglycinamide formyltransferase compare
OLJFJH_13490 -1.0 -1.9 anthranilate synthase component II compare
OLJFJH_14950 -1.0 -4.1 redox-regulated ATPase YchF compare
OLJFJH_05000 -1.0 -0.8 YibL family ribosome-associated protein compare
OLJFJH_12930 -1.0 -1.7 DNA polymerase III subunit theta compare
OLJFJH_07070 -1.0 -5.1 RNA polymerase factor sigma-54 compare
OLJFJH_10430 -1.0 -1.4 nucleoside-diphosphate kinase compare
OLJFJH_10215 -1.0 -6.0 RNA polymerase sigma factor RpoE compare
OLJFJH_10685 -1.0 -1.2 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_06735 -1.0 -6.1 thiamine phosphate synthase compare
OLJFJH_12105 -1.0 -1.8 ABC transporter permease compare
OLJFJH_16315 -1.0 -2.3 YbjN domain-containing protein compare
OLJFJH_16325 -1.0 -2.2 DUF1418 domain-containing protein compare
OLJFJH_05920 -1.0 -3.6 serine O-acetyltransferase compare
OLJFJH_10700 -1.0 -0.9 type IV secretion protein Rhs compare
OLJFJH_03950 -1.0 -0.7 DUF2387 domain-containing protein compare
OLJFJH_11930 -1.0 -3.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_00645 -1.0 -1.3 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
OLJFJH_02470 -1.0 -7.5 ribonuclease R compare
OLJFJH_16960 -0.9 -4.2 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_00595 -0.9 -3.7 sigma E protease regulator RseP compare
OLJFJH_07565 -0.9 -1.7 transcriptional regulator compare
OLJFJH_03725 -0.9 -7.1 Trk system potassium transporter TrkA compare
OLJFJH_16180 -0.9 -4.8 cell division protein FtsK compare
OLJFJH_05500 -0.9 -4.4 nitrogen regulation protein NR(II) compare
OLJFJH_09975 -0.9 -1.7 flagellar biosynthesis protein FliQ compare
OLJFJH_18125 -0.9 -3.3 tRNA guanosine(34) transglycosylase Tgt compare
OLJFJH_16940 -0.9 -4.7 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_01895 -0.9 -5.5 type VI secretion system baseplate subunit TssK compare
OLJFJH_13370 -0.9 -2.7 2-pyrone-4 6-dicarboxylate hydrolase compare
OLJFJH_06205 -0.9 -1.1 Protein of unknown function DUF compare
OLJFJH_05765 -0.9 -2.2 ribonuclease PH compare
OLJFJH_01825 -0.9 -5.6 serine/threonine phosphatase compare
OLJFJH_17550 -0.9 -0.8 hypothetical protein compare
OLJFJH_06515 -0.9 -1.0 twin-arginine translocase subunit TatA compare
OLJFJH_17090 -0.9 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
OLJFJH_18265 -0.8 -0.8 YaiA compare
OLJFJH_01380 -0.8 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
OLJFJH_05865 -0.8 -4.7 ligase compare
OLJFJH_05850 -0.8 -4.5 deacetylase compare
OLJFJH_03515 -0.8 -1.7 HicB-like domain-containing protein compare
OLJFJH_13885 -0.8 -2.2 hypothetical protein compare


Specific Phenotypes

None in this experiment