Experiment set2S531 for Bacteroides stercoris CC31F

Compare to:

B-glucan from yeast 2.5 mg/mL carbon source

200 most detrimental genes:

  gene name fitness t score description  
HMPREF1181_RS14815 +2.1 14.0 AbgT family transporter compare
HMPREF1181_RS14820 +1.9 11.1 response regulator transcription factor compare
HMPREF1181_RS01240 +1.9 2.7 pyruvate kinase compare
HMPREF1181_RS08340 +1.7 8.6 FKBP-type peptidyl-prolyl cis-trans isomerase compare
HMPREF1181_RS15440 +1.6 3.6 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HMPREF1181_RS14825 +1.6 11.4 DUF5113 domain-containing protein compare
HMPREF1181_RS15445 +1.5 5.5 sugar kinase compare
HMPREF1181_RS00960 +1.5 2.6 adenosine kinase compare
HMPREF1181_RS10835 +1.5 8.9 tetratricopeptide repeat protein compare
HMPREF1181_RS11175 +1.5 5.1 pirin family protein compare
HMPREF1181_RS10770 +1.4 11.1 hypothetical protein compare
HMPREF1181_RS09150 +1.4 10.7 ribosome silencing factor compare
HMPREF1181_RS16410 +1.4 7.4 ATP-dependent Clp protease ATP-binding subunit compare
HMPREF1181_RS00685 +1.3 9.4 DEAD/DEAH box helicase compare
HMPREF1181_RS11900 +1.3 7.3 saccharopine dehydrogenase family protein compare
HMPREF1181_RS10720 +1.3 7.6 nitronate monooxygenase compare
HMPREF1181_RS10945 +1.3 5.1 NAD-dependent epimerase/dehydratase family protein compare
HMPREF1181_RS14245 +1.2 5.2 agmatine deiminase family protein compare
HMPREF1181_RS00920 +1.2 9.7 aminopeptidase P family protein compare
HMPREF1181_RS06655 +1.2 2.6 malate dehydrogenase compare
HMPREF1181_RS07465 +1.1 3.1 RNA-binding protein compare
HMPREF1181_RS07880 +1.1 2.0 DUF4290 domain-containing protein compare
HMPREF1181_RS08670 +1.0 8.1 4-alpha-glucanotransferase compare
HMPREF1181_RS03185 +1.0 4.0 LrgB family protein compare
HMPREF1181_RS14765 +1.0 4.4 patatin-like phospholipase family protein compare
HMPREF1181_RS02000 +1.0 1.8 redox-regulated ATPase YchF compare
HMPREF1181_RS03365 +1.0 3.2 OmpH family outer membrane protein compare
HMPREF1181_RS00280 +1.0 8.1 16S ribosomal RNA compare
HMPREF1181_RS16790 +1.0 4.4 helix-turn-helix domain-containing protein compare
HMPREF1181_RS16500 +1.0 5.3 carboxynorspermidine decarboxylase compare
HMPREF1181_RS01710 +0.9 4.3 tRNA pseudouridine(55) synthase TruB compare
HMPREF1181_RS11480 +0.9 2.9 DUF3408 domain-containing protein compare
HMPREF1181_RS16950 +0.9 5.8 RNA polymerase sigma factor compare
HMPREF1181_RS14770 +0.9 6.4 alpha-amylase family protein compare
HMPREF1181_RS11825 +0.9 1.3 hypothetical protein compare
HMPREF1181_RS16980 +0.9 3.1 D-2-hydroxyacid dehydrogenase compare
HMPREF1181_RS08205 +0.8 2.5 Lrp/AsnC ligand binding domain-containing protein compare
HMPREF1181_RS12345 +0.8 4.6 pyruvate formate lyase-activating protein compare
HMPREF1181_RS15965 +0.8 2.6 V-type ATP synthase subunit B compare
HMPREF1181_RS07510 +0.8 3.4 DUF177 domain-containing protein compare
HMPREF1181_RS05315 +0.8 4.5 copper resistance protein NlpE N-terminal domain-containing protein compare
HMPREF1181_RS02855 +0.8 3.4 deoxyguanosinetriphosphate triphosphohydrolase compare
HMPREF1181_RS15975 +0.8 4.6 V-type ATP synthase subunit I compare
HMPREF1181_RS15970 +0.8 1.6 V-type ATP synthase subunit D compare
HMPREF1181_RS07450 +0.8 2.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HMPREF1181_RS01180 +0.8 5.4 translational GTPase TypA compare
HMPREF1181_RS17985 +0.8 2.0 hypothetical protein compare
HMPREF1181_RS00900 +0.8 1.1 rubredoxin compare
HMPREF1181_RS04550 +0.7 5.0 hypothetical protein compare
HMPREF1181_RS08710 +0.7 3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB compare
HMPREF1181_RS15660 +0.7 1.3 adenosylcobinamide-GDP ribazoletransferase compare
HMPREF1181_RS09620 +0.7 2.7 DUF1273 family protein compare
HMPREF1181_RS00015 +0.7 2.5 hypothetical protein compare
HMPREF1181_RS15960 +0.7 4.5 V-type ATP synthase subunit A compare
HMPREF1181_RS12340 +0.7 5.0 formate C-acetyltransferase compare
HMPREF1181_RS00205 +0.7 2.9 insulinase family protein compare
HMPREF1181_RS02840 +0.7 3.2 RNA polymerase sigma factor compare
HMPREF1181_RS07445 +0.7 3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
HMPREF1181_RS06825 +0.7 1.5 DUF1573 domain-containing protein compare
HMPREF1181_RS15675 +0.7 1.9 pyridoxal phosphate-dependent class II aminotransferase compare
HMPREF1181_RS05675 +0.7 3.3 carbohydrate kinase compare
HMPREF1181_RS11265 +0.7 3.5 OprO/OprP family phosphate-selective porin compare
HMPREF1181_RS10540 +0.7 1.9 cobyrinate a,c-diamide synthase compare
HMPREF1181_RS10385 +0.7 0.8 hypothetical protein compare
HMPREF1181_RS10150 +0.7 2.5 multidrug efflux SMR transporter compare
HMPREF1181_RS14760 +0.6 1.5 phosphoribosyltransferase compare
HMPREF1181_RS04630 +0.6 1.6 sulfurtransferase TusA family protein compare
HMPREF1181_RS10570 +0.6 2.9 sirohydrochlorin cobaltochelatase compare
HMPREF1181_RS13985 +0.6 4.9 cadmium-translocating P-type ATPase compare
HMPREF1181_RS14840 +0.6 3.9 insulinase family protein compare
HMPREF1181_RS04015 +0.6 2.4 AraC family transcriptional regulator compare
HMPREF1181_RS13750 +0.6 2.9 MGMT family protein compare
HMPREF1181_RS08035 +0.6 4.2 RNA degradosome polyphosphate kinase compare
HMPREF1181_RS04445 +0.6 3.5 galactokinase compare
HMPREF1181_RS00865 +0.6 2.6 helix-turn-helix transcriptional regulator compare
HMPREF1181_RS13230 +0.6 3.9 sodium ion-translocating decarboxylase subunit beta compare
HMPREF1181_RS00550 +0.6 4.4 DUF3467 domain-containing protein compare
HMPREF1181_RS14100 +0.6 2.9 dihydrofolate reductase compare
HMPREF1181_RS11180 +0.6 2.9 MBL fold metallo-hydrolase compare
HMPREF1181_RS03750 +0.6 2.4 hypothetical protein compare
HMPREF1181_RS10805 +0.6 3.1 YihY/virulence factor BrkB family protein compare
HMPREF1181_RS05065 +0.6 2.6 hypothetical protein compare
HMPREF1181_RS00885 +0.6 1.8 HAD family phosphatase compare
HMPREF1181_RS05055 +0.6 2.4 hypothetical protein compare
HMPREF1181_RS08130 +0.6 0.7 DUF3408 domain-containing protein compare
HMPREF1181_RS05100 +0.6 3.2 hypothetical protein compare
HMPREF1181_RS14960 +0.6 3.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HMPREF1181_RS16825 +0.6 2.2 nitroreductase compare
HMPREF1181_RS01080 +0.5 2.6 NUDIX domain-containing protein compare
HMPREF1181_RS14975 +0.5 3.8 nucleotide sugar dehydrogenase compare
HMPREF1181_RS05680 +0.5 3.2 MFS transporter compare
HMPREF1181_RS11720 +0.5 3.8 DNA/RNA non-specific endonuclease compare
HMPREF1181_RS13990 +0.5 2.3 transcriptional repressor compare
HMPREF1181_RS05085 +0.5 2.3 hypothetical protein compare
HMPREF1181_RS15650 +0.5 1.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
HMPREF1181_RS09425 +0.5 2.2 helix-turn-helix transcriptional regulator compare
HMPREF1181_RS08135 +0.5 1.7 plasmid mobilization relaxosome protein MobC compare
HMPREF1181_RS12970 +0.5 1.2 helix-turn-helix domain-containing protein compare
HMPREF1181_RS08975 +0.5 3.8 GSCFA domain-containing protein compare
HMPREF1181_RS00800 +0.5 1.4 HIT family protein compare
HMPREF1181_RS04545 +0.5 4.1 outer membrane protein transport protein compare
HMPREF1181_RS14250 +0.5 1.4 ferredoxin compare
HMPREF1181_RS17865 +0.5 1.7 type IV secretion protein Rhs compare
HMPREF1181_RS03725 +0.5 0.8 transposase compare
HMPREF1181_RS01530 +0.5 2.3 tRNA dihydrouridine synthase DusB compare
HMPREF1181_RS02900 +0.5 2.2 CYTH domain-containing protein compare
HMPREF1181_RS05260 +0.5 0.6 hypothetical protein compare
HMPREF1181_RS10620 +0.5 1.8 YkgB family protein compare
HMPREF1181_RS15950 +0.5 1.6 hypothetical protein compare
HMPREF1181_RS02970 +0.5 3.8 TonB-dependent receptor compare
HMPREF1181_RS09765 +0.5 1.2 hypothetical protein compare
HMPREF1181_RS06775 +0.5 0.7 helix-turn-helix transcriptional regulator compare
HMPREF1181_RS08620 +0.5 3.9 glycosyltransferase family 39 protein compare
HMPREF1181_RS09625 +0.5 1.7 hypothetical protein compare
HMPREF1181_RS13970 +0.5 2.2 phosphonoacetaldehyde hydrolase compare
HMPREF1181_RS05205 +0.5 1.7 DUF3164 family protein compare
HMPREF1181_RS10940 +0.5 1.6 DUF4348 domain-containing protein compare
HMPREF1181_RS03940 +0.5 1.6 N-acetylmuramoyl-L-alanine amidase compare
HMPREF1181_RS07795 +0.5 1.3 uracil-DNA glycosylase compare
HMPREF1181_RS18170 +0.5 0.9 hypothetical protein compare
HMPREF1181_RS06125 +0.5 2.8 Crp/Fnr family transcriptional regulator compare
HMPREF1181_RS13155 +0.5 1.2 DUF3408 domain-containing protein compare
HMPREF1181_RS18000 +0.5 1.3 hypothetical protein compare
HMPREF1181_RS16445 +0.5 2.2 GNAT family N-acetyltransferase compare
HMPREF1181_RS12735 +0.5 1.3 carboxypeptidase-like regulatory domain-containing protein compare
HMPREF1181_RS18090 +0.5 2.4 hypothetical protein compare
HMPREF1181_RS01020 +0.5 2.0 DsbA family protein compare
HMPREF1181_RS00825 +0.5 3.4 FecR family protein compare
HMPREF1181_RS10925 +0.5 3.3 hypothetical protein compare
HMPREF1181_RS15175 +0.5 2.9 peptide MFS transporter compare
HMPREF1181_RS16635 +0.4 2.5 nucleotidyl transferase AbiEii/AbiGii toxin family protein compare
HMPREF1181_RS09685 +0.4 0.8 DUF3989 domain-containing protein compare
HMPREF1181_RS05860 +0.4 0.7 sigma-70 family RNA polymerase sigma factor compare
HMPREF1181_RS16945 +0.4 3.0 pyruvate carboxylase subunit B compare
HMPREF1181_RS10885 +0.4 2.0 RidA family protein compare
HMPREF1181_RS01395 +0.4 1.4 hypothetical protein compare
HMPREF1181_RS16940 +0.4 3.2 response regulator compare
HMPREF1181_RS01880 +0.4 2.5 DUF4929 family protein compare
HMPREF1181_RS02960 +0.4 3.5 beta-glucosidase BglX compare
HMPREF1181_RS09875 +0.4 0.6 hypothetical protein compare
HMPREF1181_RS15285 +0.4 3.0 sugar MFS transporter compare
HMPREF1181_RS14260 +0.4 1.3 hypothetical protein compare
HMPREF1181_RS12255 +0.4 1.6 hypothetical protein compare
HMPREF1181_RS11195 +0.4 1.2 hypothetical protein compare
HMPREF1181_RS00250 +0.4 1.0 TIGR04076 family protein compare
HMPREF1181_RS10625 +0.4 1.6 AraC family transcriptional regulator compare
HMPREF1181_RS03190 +0.4 2.0 CidA/LrgA family protein compare
HMPREF1181_RS16795 +0.4 2.2 HAD-IC family P-type ATPase compare
HMPREF1181_RS04345 +0.4 0.7 hypothetical protein compare
HMPREF1181_RS15830 +0.4 1.3 hypothetical protein compare
HMPREF1181_RS17720 +0.4 0.8 hypothetical protein compare
HMPREF1181_RS14240 +0.4 1.2 hypothetical protein compare
HMPREF1181_RS05875 +0.4 1.1 30S ribosomal protein S1 compare
HMPREF1181_RS09395 +0.4 1.1 YraN family protein compare
HMPREF1181_RS00360 +0.4 2.6 urocanate hydratase compare
HMPREF1181_RS08410 +0.4 1.8 DUF3575 domain-containing protein compare
HMPREF1181_RS15375 +0.4 2.2 TolC family protein compare
HMPREF1181_RS15180 +0.4 2.4 Cys-tRNA(Pro) deacylase compare
HMPREF1181_RS11225 +0.4 2.0 fimbrillin family protein compare
HMPREF1181_RS10775 +0.4 2.1 hypothetical protein compare
HMPREF1181_RS03605 +0.4 1.6 ABC transporter ATP-binding protein compare
HMPREF1181_RS01860 +0.4 3.0 S8 family serine peptidase compare
HMPREF1181_RS15815 +0.4 0.7 hypothetical protein compare
HMPREF1181_RS02350 +0.4 2.8 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase compare
HMPREF1181_RS11485 +0.4 0.9 hypothetical protein compare
HMPREF1181_RS04970 +0.4 1.9 nitrogen-fixing protein NifU compare
HMPREF1181_RS07790 +0.4 1.2 hypothetical protein compare
HMPREF1181_RS08100 +0.4 2.7 rRNA cytosine-C5-methyltransferase compare
HMPREF1181_RS12205 +0.4 1.3 toprim domain-containing protein compare
HMPREF1181_RS03015 +0.4 1.7 N-acetylmuramic acid 6-phosphate etherase compare
HMPREF1181_RS08060 +0.4 3.3 TonB-dependent receptor compare
HMPREF1181_RS05275 +0.4 1.4 DUF4251 domain-containing protein compare
HMPREF1181_RS07455 +0.4 1.9 trigger factor compare
HMPREF1181_RS00210 +0.4 2.3 peptidylprolyl isomerase compare
HMPREF1181_RS03175 +0.4 2.3 GNAT family N-acetyltransferase compare
HMPREF1181_RS12115 +0.4 1.1 hypothetical protein compare
HMPREF1181_RS16600 +0.4 1.7 C-GCAxxG-C-C family protein compare
HMPREF1181_RS15755 +0.4 2.2 reverse transcriptase/maturase family protein compare
HMPREF1181_RS14645 +0.4 1.8 xylose isomerase compare
HMPREF1181_RS11000 +0.4 1.8 DUF3868 domain-containing protein compare
HMPREF1181_RS06305 +0.4 2.3 PhoH family protein compare
HMPREF1181_RS00090 +0.4 1.2 TonB-dependent receptor compare
HMPREF1181_RS12360 +0.4 2.4 NigD-like N-terminal domain-containing protein compare
HMPREF1181_RS10210 +0.4 1.1 S24/S26 family peptidase compare
HMPREF1181_RS17810 +0.4 0.4 hypothetical protein compare
HMPREF1181_RS10970 +0.4 1.8 replicative DNA helicase compare
HMPREF1181_RS11625 +0.4 1.5 hypothetical protein compare
HMPREF1181_RS14340 +0.4 1.3 endopeptidase La compare
HMPREF1181_RS11580 +0.4 0.9 site-specific integrase compare
HMPREF1181_RS16975 +0.4 1.6 replication-associated recombination protein A compare
HMPREF1181_RS10660 +0.4 1.6 DsbA family protein compare
HMPREF1181_RS01890 +0.4 2.9 TonB-dependent receptor compare
HMPREF1181_RS06800 +0.4 1.7 DUF4984 domain-containing protein compare
HMPREF1181_RS14230 +0.4 1.9 GtrA family protein compare
HMPREF1181_RS09970 +0.4 1.0 helix-turn-helix domain-containing protein compare
HMPREF1181_RS05730 +0.4 1.4 PqqD family protein compare
HMPREF1181_RS01885 +0.4 2.3 RagB/SusD family nutrient uptake outer membrane protein compare
HMPREF1181_RS08935 +0.4 2.5 glycoside hydrolase family 88 protein compare
HMPREF1181_RS08065 +0.4 1.7 response regulator compare
HMPREF1181_RS15955 +0.4 1.4 DUF2764 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source B-glucan from yeast in Bacteroides stercoris CC31F

For carbon source B-glucan from yeast across organisms