Experiment set2S511 for Erwinia tracheiphila SCR3

Compare to:

Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2)

200 most important genes:

  gene name fitness t score description  
LU632_RS23980 tatC -6.2 -4.3 Sec-independent protein translocase subunit TatC compare
LU632_RS15245 purE -5.9 -2.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
LU632_RS16115 sdhC -5.1 -3.5 succinate dehydrogenase cytochrome b556 subunit compare
LU632_RS07865 purF -5.0 -3.5 amidophosphoribosyltransferase compare
LU632_RS21360 degS -4.9 -6.7 outer membrane-stress sensor serine endopeptidase DegS compare
LU632_RS08880 -4.8 -2.2 ABC transporter permease compare
LU632_RS15425 rpoE -4.8 -7.9 RNA polymerase sigma factor RpoE compare
LU632_RS03310 -4.6 -9.9 sucrose-6-phosphate hydrolase compare
LU632_RS08785 -4.6 -3.2 glycosyltransferase family 2 protein compare
LU632_RS08790 -4.5 -3.1 EpsG family protein compare
LU632_RS16110 sdhD -4.4 -4.3 succinate dehydrogenase membrane anchor subunit compare
LU632_RS09955 pyrD -4.4 -5.2 quinone-dependent dihydroorotate dehydrogenase compare
LU632_RS08815 -4.3 -2.8 colanic acid biosynthesis glycosyltransferase WcaL compare
LU632_RS04270 ulaD -4.3 -6.0 3-keto-L-gulonate-6-phosphate decarboxylase UlaD compare
LU632_RS21755 -4.3 -13.5 adenylosuccinate synthase compare
LU632_RS20175 -4.3 -1.0 hypothetical protein compare
LU632_RS02100 -4.3 -7.1 hemolysin family protein compare
LU632_RS02755 carA -4.3 -2.9 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
LU632_RS04250 yiaK -4.3 -4.3 3-dehydro-L-gulonate 2-dehydrogenase compare
LU632_RS19585 sthA -4.2 -7.6 Si-specific NAD(P)(+) transhydrogenase compare
LU632_RS07775 aroC -4.2 -4.1 chorismate synthase compare
LU632_RS08775 -4.1 -2.8 protein tyrosine phosphatase compare
LU632_RS21240 mlaE -4.1 -4.0 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
LU632_RS08275 purM -4.1 -2.8 phosphoribosylformylglycinamidine cyclo-ligase compare
LU632_RS20695 bacA -4.1 -2.6 undecaprenyl-diphosphate phosphatase compare
LU632_RS08885 -4.1 -4.4 ABC transporter ATP-binding protein compare
LU632_RS01180 -4.0 -0.9 hypothetical protein compare
LU632_RS20950 pyrB -4.0 -2.8 aspartate carbamoyltransferase compare
LU632_RS17975 purL -4.0 -2.8 phosphoribosylformylglycinamidine synthase compare
LU632_RS22140 glnL -4.0 -8.9 nitrogen regulation protein NR(II) compare
LU632_RS08780 wzc -3.9 -2.7 tyrosine-protein kinase Wzc compare
LU632_RS06615 ptsI -3.9 -6.5 phosphoenolpyruvate-protein phosphotransferase PtsI compare
LU632_RS16120 -3.9 -18.6 citrate synthase compare
LU632_RS21245 mlaF -3.8 -9.2 phospholipid ABC transporter ATP-binding protein MlaF compare
LU632_RS17615 -3.8 -3.1 YejL family protein compare
LU632_RS02750 carB -3.8 -2.6 carbamoyl-phosphate synthase large subunit compare
LU632_RS06635 zipA -3.8 -1.9 cell division protein ZipA compare
LU632_RS21875 gpsA -3.8 -11.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
LU632_RS17820 ndk -3.7 -2.4 nucleoside-diphosphate kinase compare
LU632_RS21225 mlaB -3.7 -3.5 lipid asymmetry maintenance protein MlaB compare
LU632_RS19615 argC -3.7 -4.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
LU632_RS22135 glnG -3.7 -4.4 nitrogen regulation protein NR(I) compare
LU632_RS10340 pyrC -3.7 -2.5 dihydroorotase compare
LU632_RS24155 -3.6 -1.7 class I adenylate cyclase compare
LU632_RS21235 mlaD -3.6 -7.2 outer membrane lipid asymmetry maintenance protein MlaD compare
LU632_RS13085 dsbB -3.6 -5.2 disulfide bond formation protein DsbB compare
LU632_RS08770 -3.6 -2.5 polysaccharide export protein compare
LU632_RS19930 rseP -3.5 -3.4 sigma E protease regulator RseP compare
LU632_RS08925 hisA -3.5 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
LU632_RS08820 -3.5 -2.4 lipopolysaccharide biosynthesis protein compare
LU632_RS21365 mdh -3.5 -4.1 malate dehydrogenase compare
LU632_RS19270 ftsX -3.4 -8.5 permease-like cell division protein FtsX compare
LU632_RS01015 purD -3.4 -2.4 phosphoribosylamine--glycine ligase compare
LU632_RS12500 pyrF -3.4 -4.0 orotidine-5'-phosphate decarboxylase compare
LU632_RS09195 moaE -3.4 -0.8 molybdopterin synthase catalytic subunit MoaE compare
LU632_RS03210 -3.4 -1.9 EscI/YscI/HrpB family type III secretion system inner rod protein compare
LU632_RS15250 purK -3.3 -2.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
LU632_RS22810 -3.3 -9.8 aspartate aminotransferase family protein compare
LU632_RS25495 -3.2 -1.5 type II toxin-antitoxin system MqsA family antitoxin compare
LU632_RS21955 -3.2 -1.3 glycosyltransferase family 4 protein compare
LU632_RS19275 ftsE -3.2 -5.0 cell division ATP-binding protein FtsE compare
LU632_RS21230 mlaC -3.1 -4.2 phospholipid-binding protein MlaC compare
LU632_RS04280 araD -3.1 -11.7 L-ribulose-5-phosphate 4-epimerase compare
LU632_RS16105 sdhA -3.1 -5.2 succinate dehydrogenase flavoprotein subunit compare
LU632_RS05320 -3.1 -1.0 hypothetical protein compare
LU632_RS03160 -3.1 -5.4 hypothetical protein compare
LU632_RS21085 secG -3.1 -2.2 preprotein translocase subunit SecG compare
LU632_RS08000 nuoI -3.0 -2.1 NADH-quinone oxidoreductase subunit NuoI compare
LU632_RS08930 hisH -3.0 -7.0 imidazole glycerol phosphate synthase subunit HisH compare
LU632_RS21445 mreC -3.0 -1.6 rod shape-determining protein MreC compare
LU632_RS02870 leuC -3.0 -10.5 3-isopropylmalate dehydratase large subunit compare
LU632_RS12310 -3.0 -1.6 hypothetical protein compare
LU632_RS04710 -2.9 -0.7 IS110 family transposase compare
LU632_RS04255 -2.9 -2.9 YhcH/YjgK/YiaL family protein compare
LU632_RS14010 ldcA -2.9 -2.0 muramoyltetrapeptide carboxypeptidase compare
LU632_RS04265 -2.9 -10.9 carbohydrate kinase compare
LU632_RS08800 -2.9 -1.4 glycosyltransferase compare
LU632_RS09475 mntR -2.9 -2.6 manganese-binding transcriptional regulator MntR compare
LU632_RS10785 tagH -2.9 -16.2 type VI secretion system-associated FHA domain protein TagH compare
LU632_RS10790 tagF -2.9 -8.6 type VI secretion system-associated protein TagF compare
LU632_RS20780 -2.9 -0.6 hypothetical protein compare
LU632_RS01085 -2.9 -3.4 class I SAM-dependent methyltransferase compare
LU632_RS16100 -2.8 -4.0 succinate dehydrogenase iron-sulfur subunit compare
LU632_RS02875 leuB -2.8 -9.6 3-isopropylmalate dehydrogenase compare
LU632_RS16415 tatE -2.8 -0.6 twin-arginine translocase subunit TatE compare
LU632_RS08915 hisIE -2.8 -4.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
LU632_RS03305 -2.8 -8.2 sucrose-specific PTS transporter subunit IIBC compare
LU632_RS23875 dsbA -2.8 -1.0 thiol:disulfide interchange protein DsbA compare
LU632_RS02865 leuD -2.7 -4.5 3-isopropylmalate dehydratase small subunit compare
LU632_RS07970 -2.7 -6.5 NADH-quinone oxidoreductase subunit B compare
LU632_RS19610 argB -2.7 -3.3 acetylglutamate kinase compare
LU632_RS18420 -2.7 -0.9 LysE family translocator compare
LU632_RS02910 rsmH -2.7 -8.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
LU632_RS08335 -2.7 -1.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
LU632_RS11470 asr -2.7 -2.0 acid resistance repetitive basic protein Asr compare
LU632_RS01090 rnhA -2.6 -1.2 ribonuclease HI compare
LU632_RS22015 pyrE -2.6 -1.8 orotate phosphoribosyltransferase compare
LU632_RS02140 -2.6 -2.5 ribosome-associated protein compare
LU632_RS03155 -2.6 -3.2 type III secretion system HrpP C-terminal domain-containing protein compare
LU632_RS19600 argH -2.6 -8.3 argininosuccinate lyase compare
LU632_RS16250 nagA -2.6 -7.4 N-acetylglucosamine-6-phosphate deacetylase compare
LU632_RS07985 nuoF -2.6 -4.9 NADH-quinone oxidoreductase subunit NuoF compare
LU632_RS18500 tgt -2.6 -1.8 tRNA guanosine(34) transglycosylase Tgt compare
LU632_RS07975 nuoC -2.6 -8.3 NADH-quinone oxidoreductase subunit C/D compare
LU632_RS06535 -2.6 -0.6 tRNA-Ala compare
LU632_RS25465 -2.6 -2.1 hypothetical protein compare
LU632_RS09245 -2.5 -4.7 L,D-transpeptidase family protein compare
LU632_RS16485 arnA -2.5 -10.8 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA compare
LU632_RS04260 -2.5 -6.6 MFS transporter compare
LU632_RS02465 -2.5 -0.6 IS256 family transposase compare
LU632_RS13455 cmoA -2.5 -3.2 carboxy-S-adenosyl-L-methionine synthase CmoA compare
LU632_RS08805 -2.5 -11.0 phage tailspike protein compare
LU632_RS14735 -2.4 -5.0 glycine zipper 2TM domain-containing protein compare
LU632_RS24405 -2.4 -10.3 branched-chain amino acid transaminase compare
LU632_RS23845 -2.4 -3.7 DUF1493 family protein compare
LU632_RS21890 -2.4 -2.8 rhodanese-like domain-containing protein compare
LU632_RS08210 -2.4 -1.7 hypothetical protein compare
LU632_RS23340 -2.4 -0.5 dihydroxyacetone kinase subunit L compare
LU632_RS19665 ftsN -2.3 -3.7 cell division protein FtsN compare
LU632_RS08950 hisG -2.3 -8.0 ATP phosphoribosyltransferase compare
LU632_RS07045 -2.3 -0.9 hypothetical protein compare
LU632_RS09745 -2.3 -1.0 DNA translocase FtsK 4TM domain-containing protein compare
LU632_RS15640 -2.3 -1.8 helix-turn-helix domain-containing protein compare
LU632_RS24225 rffA -2.3 -12.6 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
LU632_RS12200 -2.3 -2.6 excisionase family protein compare
LU632_RS07300 mlaA -2.3 -5.6 phospholipid-binding lipoprotein MlaA compare
LU632_RS07980 nuoE -2.2 -0.7 NADH-quinone oxidoreductase subunit NuoE compare
LU632_RS08865 rfbC -2.2 -8.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
LU632_RS06610 crr -2.2 -1.2 PTS glucose transporter subunit IIA compare
LU632_RS04810 -2.2 -0.7 hypothetical protein compare
LU632_RS07965 -2.2 -4.8 NADH-quinone oxidoreductase subunit A compare
LU632_RS24260 trxA -2.2 -2.5 thioredoxin TrxA compare
LU632_RS16990 bamE -2.2 -1.1 outer membrane protein assembly factor BamE compare
LU632_RS22090 -2.2 -1.2 pyocin activator PrtN family protein compare
LU632_RS08920 hisF -2.2 -4.1 imidazole glycerol phosphate synthase subunit HisF compare
LU632_RS04275 -2.2 -4.2 L-ribulose-5-phosphate 3-epimerase compare
LU632_RS24205 rffM -2.2 -8.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
LU632_RS25000 -2.2 -1.7 DUF3164 family protein compare
LU632_RS22785 -2.2 -2.2 YheU family protein compare
LU632_RS10685 -2.1 -0.9 hypothetical protein compare
LU632_RS03300 -2.1 -9.4 carbohydrate porin compare
LU632_RS21345 -2.1 -8.3 cell division protein ZapE compare
LU632_RS02070 hflC -2.1 -1.3 protease modulator HflC compare
LU632_RS02490 -2.1 -1.6 DUF1328 domain-containing protein compare
LU632_RS03245 -2.1 -3.1 hypothetical protein compare
LU632_RS05410 mltC -2.1 -9.6 membrane-bound lytic murein transglycosylase MltC compare
LU632_RS24445 -2.1 -0.8 DUF413 domain-containing protein compare
LU632_RS19960 -2.1 -1.1 hypothetical protein compare
LU632_RS05210 -2.1 -1.1 TIGR03757 family integrating conjugative element protein compare
LU632_RS24235 wecC -2.1 -5.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
LU632_RS24840 kup -2.1 -6.8 low affinity potassium transporter Kup compare
LU632_RS20900 argF -2.0 -8.0 ornithine carbamoyltransferase compare
LU632_RS05960 sdhE -2.0 -3.2 FAD assembly factor SdhE compare
LU632_RS24215 -2.0 -6.6 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
LU632_RS12940 purU -2.0 -9.3 formyltetrahydrofolate deformylase compare
LU632_RS08945 hisD -2.0 -5.1 histidinol dehydrogenase compare
LU632_RS03140 sctS -2.0 -3.5 type III secretion system export apparatus subunit SctS compare
LU632_RS08005 nuoJ -2.0 -4.0 NADH-quinone oxidoreductase subunit J compare
LU632_RS18555 -2.0 -2.0 hypothetical protein compare
LU632_RS07995 nuoH -2.0 -4.2 NADH-quinone oxidoreductase subunit NuoH compare
LU632_RS03130 sctU -2.0 -6.1 type III secretion system export apparatus subunit SctU compare
LU632_RS02880 leuA -2.0 -8.5 2-isopropylmalate synthase compare
LU632_RS09795 aroA -2.0 -9.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
LU632_RS22285 -2.0 -0.9 recombinase family protein compare
LU632_RS14505 -2.0 -1.6 hypothetical protein compare
LU632_RS18505 yajC -2.0 -0.4 preprotein translocase subunit YajC compare
LU632_RS18400 -2.0 -1.0 MFS transporter compare
LU632_RS00895 tuf -2.0 -6.2 elongation factor Tu compare
LU632_RS07905 -1.9 -0.9 IS91 family transposase compare
LU632_RS19980 glnD -1.9 -1.1 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
LU632_RS17320 fruK -1.9 -3.3 1-phosphofructokinase compare
LU632_RS07990 nuoG -1.9 -4.7 NADH-quinone oxidoreductase subunit NuoG compare
LU632_RS08010 nuoK -1.9 -2.2 NADH-quinone oxidoreductase subunit NuoK compare
LU632_RS08015 nuoL -1.9 -6.1 NADH-quinone oxidoreductase subunit L compare
LU632_RS03205 -1.9 -3.4 hypothetical protein compare
LU632_RS01020 purH -1.9 -1.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
LU632_RS20270 -1.9 -0.6 IS5 family transposase compare
LU632_RS15085 -1.9 -3.6 hypothetical protein compare
LU632_RS16480 -1.9 -3.6 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
LU632_RS08935 hisB -1.8 -4.8 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
LU632_RS16490 arnC -1.8 -7.9 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
LU632_RS04065 -1.8 -2.2 AlpA family phage regulatory protein compare
LU632_RS03150 sctQ -1.8 -7.2 type III secretion system cytoplasmic ring protein SctQ compare
LU632_RS22935 envZ -1.8 -1.8 two-component system sensor histidine kinase EnvZ compare
LU632_RS02085 cysQ -1.8 -1.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
LU632_RS08940 hisC -1.8 -7.8 histidinol-phosphate transaminase compare
LU632_RS01630 -1.8 -1.5 phage tail protein compare
LU632_RS02065 hflK -1.8 -1.6 FtsH protease activity modulator HflK compare
LU632_RS19815 gmhB -1.8 -0.7 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
LU632_RS06335 -1.8 -5.8 glycerate kinase compare
LU632_RS08025 nuoN -1.8 -3.9 NADH-quinone oxidoreductase subunit NuoN compare
LU632_RS18455 panE -1.8 -5.0 2-dehydropantoate 2-reductase compare
LU632_RS20330 -1.7 -1.8 IS6 family transposase compare
LU632_RS24250 wecA -1.7 -8.7 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
LU632_RS06410 -1.7 -0.8 phosphoadenylyl-sulfate reductase compare
LU632_RS10270 -1.7 -1.5 glucan biosynthesis protein G compare
LU632_RS19205 -1.7 -3.8 DUF2756 domain-containing protein compare
LU632_RS21895 envC -1.7 -7.0 murein hydrolase activator EnvC compare
LU632_RS12910 -1.7 -1.2 NAD-dependent epimerase compare
LU632_RS14835 plsX -1.7 -3.5 phosphate acyltransferase PlsX compare


Specific Phenotypes

For 1 genes in this experiment