Experiment set2S506 for Bacteroides stercoris CC31F

Compare to:

ABB 1 x carbon source complex media

200 most important genes:

  gene name fitness t score description  
HMPREF1181_RS03235 -3.7 -5.6 elongation factor P compare
HMPREF1181_RS06100 -3.4 -11.5 DUF4270 domain-containing protein compare
HMPREF1181_RS06865 -3.4 -3.3 branched-chain amino acid aminotransferase compare
HMPREF1181_RS05800 -3.3 -6.7 hypothetical protein compare
HMPREF1181_RS06505 -3.3 -3.9 ribulose-phosphate 3-epimerase compare
HMPREF1181_RS08265 -3.0 -5.9 (d)CMP kinase compare
HMPREF1181_RS02460 -3.0 -8.4 glycosyltransferase family 2 protein compare
HMPREF1181_RS00190 -2.9 -2.0 translocation/assembly module TamB domain-containing protein compare
HMPREF1181_RS02505 -2.9 -15.9 UDP-galactopyranose mutase compare
HMPREF1181_RS00185 -2.7 -2.6 BamA/TamA family outer membrane protein compare
HMPREF1181_RS08230 -2.6 -3.9 hypothetical protein compare
HMPREF1181_RS06930 -2.5 -2.4 tRNA 2-thiouridine(34) synthase MnmA compare
HMPREF1181_RS08795 -2.4 -13.9 hypothetical protein compare
HMPREF1181_RS01535 -2.4 -3.2 phosphatase PAP2 family protein compare
HMPREF1181_RS05470 -2.3 -2.6 HAD-IIIA family hydrolase compare
HMPREF1181_RS16620 -2.3 -3.6 YebC/PmpR family DNA-binding transcriptional regulator compare
HMPREF1181_RS18085 -2.3 -12.7 hypothetical protein compare
HMPREF1181_RS09265 -2.2 -3.2 3-dehydroquinate synthase compare
HMPREF1181_RS02450 -2.1 -2.5 hypothetical protein compare
HMPREF1181_RS01615 -2.0 -6.5 polysaccharide deacetylase family protein compare
HMPREF1181_RS09235 -1.8 -12.2 hypothetical protein compare
HMPREF1181_RS14790 -1.8 -12.4 alpha amylase C-terminal domain-containing protein compare
HMPREF1181_RS08725 -1.7 -3.0 50S ribosomal protein L9 compare
HMPREF1181_RS14025 -1.7 -2.5 acyl-CoA dehydrogenase family protein compare
HMPREF1181_RS09810 -1.7 -1.8 hypothetical protein compare
HMPREF1181_RS03405 -1.6 -8.3 SRPBCC family protein compare
HMPREF1181_RS07410 -1.6 -4.3 hypothetical protein compare
HMPREF1181_RS01550 -1.6 -2.9 ribonuclease R compare
HMPREF1181_RS06495 -1.6 -1.7 DHH family phosphoesterase compare
HMPREF1181_RS05780 -1.6 -4.2 SurA N-terminal domain-containing protein compare
HMPREF1181_RS10875 -1.5 -11.1 PhoH family protein compare
HMPREF1181_RS12525 -1.4 -3.6 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
HMPREF1181_RS05660 -1.4 -4.2 ATP-binding protein compare
HMPREF1181_RS00910 -1.4 -9.8 nucleoside kinase compare
HMPREF1181_RS02000 -1.4 -2.0 redox-regulated ATPase YchF compare
HMPREF1181_RS07720 -1.4 -1.7 RteC domain-containing protein compare
HMPREF1181_RS03270 -1.4 -7.0 DeoR/GlpR transcriptional regulator compare
HMPREF1181_RS04800 -1.3 -6.3 CDP-alcohol phosphatidyltransferase family protein compare
HMPREF1181_RS01240 -1.3 -2.1 pyruvate kinase compare
HMPREF1181_RS16965 -1.3 -8.9 carboxypeptidase-like regulatory domain-containing protein compare
HMPREF1181_RS07010 -1.2 -5.6 adenylosuccinate lyase compare
HMPREF1181_RS09330 -1.2 -2.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
HMPREF1181_RS08500 -1.1 -3.1 methylmalonyl-CoA mutase small subunit compare
HMPREF1181_RS04345 -1.1 -1.8 hypothetical protein compare
HMPREF1181_RS02105 -1.1 -6.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HMPREF1181_RS02070 -1.0 -3.0 DNA polymerase I compare
HMPREF1181_RS01915 -1.0 -5.3 RNA methyltransferase compare
HMPREF1181_RS01180 -1.0 -7.9 translational GTPase TypA compare
HMPREF1181_RS00235 -1.0 -4.8 TetR/AcrR family transcriptional regulator compare
HMPREF1181_RS12095 -1.0 -3.0 hypothetical protein compare
HMPREF1181_RS01565 -0.9 -3.7 serine acetyltransferase compare
HMPREF1181_RS09030 -0.9 -1.3 NADH-quinone oxidoreductase subunit NuoK compare
HMPREF1181_RS13360 -0.9 -5.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
HMPREF1181_RS08740 -0.9 -2.7 MarR family transcriptional regulator compare
HMPREF1181_RS05875 -0.9 -2.3 30S ribosomal protein S1 compare
HMPREF1181_RS02680 -0.9 -5.6 magnesium transporter CorA family protein compare
HMPREF1181_RS01135 -0.9 -1.0 tRNA-Arg compare
HMPREF1181_RS02510 -0.9 -1.6 hypothetical protein compare
HMPREF1181_RS04815 -0.9 -5.3 inositol-3-phosphate synthase compare
HMPREF1181_RS15115 -0.9 -1.3 RnfABCDGE type electron transport complex subunit D compare
HMPREF1181_RS01095 -0.9 -6.0 type I DNA topoisomerase compare
HMPREF1181_RS11835 -0.8 -1.5 DUF4250 domain-containing protein compare
HMPREF1181_RS11490 -0.8 -1.4 DUF4134 domain-containing protein compare
HMPREF1181_RS04810 -0.8 -2.7 phosphatidylglycerophosphatase A compare
HMPREF1181_RS04795 -0.8 -5.5 inositol phosphorylceramide synthase compare
HMPREF1181_RS14235 -0.8 -3.0 carbon-nitrogen hydrolase compare
HMPREF1181_RS05535 -0.8 -5.3 LacI family DNA-binding transcriptional regulator compare
HMPREF1181_RS04805 -0.8 -4.7 GtrA family protein compare
HMPREF1181_RS14020 -0.8 -1.7 electron transfer flavoprotein subunit alpha/FixB family protein compare
HMPREF1181_RS06370 -0.8 -2.8 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase compare
HMPREF1181_RS04540 -0.8 -1.9 NADH peroxidase compare
HMPREF1181_RS07480 -0.8 -5.9 ABC transporter ATP-binding protein compare
HMPREF1181_RS11840 -0.7 -3.2 iron ABC transporter permease compare
HMPREF1181_RS18165 -0.7 -1.9 hypothetical protein compare
HMPREF1181_RS14340 -0.7 -2.8 endopeptidase La compare
HMPREF1181_RS10395 -0.7 -1.5 hypothetical protein compare
HMPREF1181_RS17165 -0.7 -1.7 phage integrase SAM-like domain-containing protein compare
HMPREF1181_RS00315 -0.7 -1.5 hypothetical protein compare
HMPREF1181_RS01590 -0.7 -1.6 DedA family protein compare
HMPREF1181_RS05375 -0.7 -1.5 DUF4286 family protein compare
HMPREF1181_RS06655 -0.7 -1.5 malate dehydrogenase compare
HMPREF1181_RS02275 -0.7 -1.6 4-hydroxy-tetrahydrodipicolinate reductase compare
HMPREF1181_RS09335 -0.7 -1.7 hypothetical protein compare
HMPREF1181_RS16640 -0.7 -1.0 hypothetical protein compare
HMPREF1181_RS03560 -0.7 -3.2 tRNA-Pro compare
HMPREF1181_RS08190 -0.7 -2.2 cardiolipin synthase compare
HMPREF1181_RS05515 -0.7 -5.6 TonB-dependent receptor compare
HMPREF1181_RS08495 -0.7 -2.4 methylmalonyl-CoA mutase compare
HMPREF1181_RS07475 -0.7 -4.8 ABC transporter permease compare
HMPREF1181_RS15195 -0.7 -0.9 PorT family protein compare
HMPREF1181_RS16590 -0.7 -1.6 elongation factor 4 compare
HMPREF1181_RS02260 -0.7 -4.3 WbqC family protein compare
HMPREF1181_RS11570 -0.7 -1.9 ORF6N domain-containing protein compare
HMPREF1181_RS08650 -0.7 -4.6 MCE family protein compare
HMPREF1181_RS04705 -0.6 -1.7 thioredoxin compare
HMPREF1181_RS10580 -0.6 -1.0 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
HMPREF1181_RS09095 -0.6 -2.0 methylmalonyl Co-A mutase-associated GTPase MeaB compare
HMPREF1181_RS08115 -0.6 -1.8 DUF5056 domain-containing protein compare
HMPREF1181_RS14175 -0.6 -1.7 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
HMPREF1181_RS17255 -0.6 -1.1 hypothetical protein compare
HMPREF1181_RS05540 -0.6 -4.8 SLC45 family MFS transporter compare
HMPREF1181_RS12480 -0.6 -2.3 ABC transporter ATP-binding protein compare
HMPREF1181_RS03380 -0.6 -3.0 hypothetical protein compare
HMPREF1181_RS15590 -0.6 -1.4 glucosaminidase domain-containing protein compare
HMPREF1181_RS07785 -0.6 -0.9 antibiotic biosynthesis monooxygenase compare
HMPREF1181_RS09260 -0.6 -1.7 hypothetical protein compare
HMPREF1181_RS14610 -0.6 -3.0 DUF4296 domain-containing protein compare
HMPREF1181_RS08785 -0.6 -3.5 S9 family peptidase compare
HMPREF1181_RS04590 -0.6 -3.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
HMPREF1181_RS00020 -0.6 -1.7 mechanosensitive ion channel compare
HMPREF1181_RS12740 -0.6 -3.3 energy-dependent translational throttle protein EttA compare
HMPREF1181_RS14245 -0.6 -2.3 agmatine deiminase family protein compare
HMPREF1181_RS17750 -0.6 -1.0 smalltalk protein compare
HMPREF1181_RS08800 -0.6 -3.6 SAM-dependent methyltransferase compare
HMPREF1181_RS09240 -0.5 -2.2 DUF3822 family protein compare
HMPREF1181_RS12465 -0.5 -2.0 DUF4492 domain-containing protein compare
HMPREF1181_RS05750 -0.5 -1.4 tetratricopeptide repeat protein compare
HMPREF1181_RS00035 -0.5 -2.5 thiamine diphosphokinase compare
HMPREF1181_RS09215 -0.5 -1.9 M23 family metallopeptidase compare
HMPREF1181_RS09000 -0.5 -2.0 NADH-quinone oxidoreductase subunit A compare
HMPREF1181_RS14205 -0.5 -0.9 type I restriction enzyme HsdR N-terminal domain-containing protein compare
HMPREF1181_RS05510 -0.5 -3.9 RagB/SusD family nutrient uptake outer membrane protein compare
HMPREF1181_RS01105 -0.5 -1.8 HU family DNA-binding protein compare
HMPREF1181_RS15815 -0.5 -1.3 hypothetical protein compare
HMPREF1181_RS07700 -0.5 -1.4 MobC family plasmid mobilization relaxosome protein compare
HMPREF1181_RS16340 -0.5 -2.4 HU family DNA-binding protein compare
HMPREF1181_RS01215 -0.5 -1.0 5'-methylthioadenosine/adenosylhomocysteine nucleosidase compare
HMPREF1181_RS14185 -0.5 -3.7 dihydroorotate dehydrogenase electron transfer subunit compare
HMPREF1181_RS04765 -0.5 -2.4 gliding motility-associated protein GldE compare
HMPREF1181_RS05815 -0.5 -2.4 alkaline phosphatase family protein compare
HMPREF1181_RS07445 -0.5 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
HMPREF1181_RS08790 -0.5 -3.1 lipoyl synthase compare
HMPREF1181_RS04680 -0.5 -2.8 DUF4369 domain-containing protein compare
HMPREF1181_RS01570 -0.5 -3.0 RNA methyltransferase compare
HMPREF1181_RS15445 -0.5 -1.7 sugar kinase compare
HMPREF1181_RS12535 -0.5 -3.6 GDP-L-fucose synthase compare
HMPREF1181_RS06080 -0.5 -3.8 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
HMPREF1181_RS11845 -0.5 -3.7 ABC transporter substrate-binding protein compare
HMPREF1181_RS00960 -0.5 -0.9 adenosine kinase compare
HMPREF1181_RS04525 -0.5 -3.3 transporter substrate-binding domain-containing protein compare
HMPREF1181_RS12105 -0.5 -2.2 hypothetical protein compare
HMPREF1181_RS10600 -0.5 -0.9 ABC transporter ATP-binding protein compare
HMPREF1181_RS12045 -0.5 -0.8 ParA family protein compare
HMPREF1181_RS00640 -0.5 -1.7 gamma carbonic anhydrase family protein compare
HMPREF1181_RS04585 -0.5 -1.5 hypothetical protein compare
HMPREF1181_RS05775 -0.5 -2.7 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
HMPREF1181_RS12515 -0.5 -3.1 6-phosphogluconolactonase compare
HMPREF1181_RS02635 -0.5 -1.6 helix-turn-helix transcriptional regulator compare
HMPREF1181_RS07870 -0.5 -2.0 YicC family protein compare
HMPREF1181_RS05045 -0.5 -2.5 sodium:proton antiporter compare
HMPREF1181_RS05105 -0.5 -0.5 hypothetical protein compare
HMPREF1181_RS18070 -0.5 -1.1 hypothetical protein compare
HMPREF1181_RS15185 -0.5 -3.7 excinuclease ABC subunit UvrA compare
HMPREF1181_RS16625 -0.5 -0.8 hypothetical protein compare
HMPREF1181_RS12530 -0.5 -2.4 GDP-mannose 4,6-dehydratase compare
HMPREF1181_RS13295 -0.5 -2.2 DUF4199 domain-containing protein compare
HMPREF1181_RS05585 -0.5 -3.7 peptide chain release factor 3 compare
HMPREF1181_RS15565 -0.5 -1.3 DUF2807 domain-containing protein compare
HMPREF1181_RS04665 -0.4 -2.0 hypothetical protein compare
HMPREF1181_RS07535 -0.4 -1.2 HU family DNA-binding protein compare
HMPREF1181_RS14395 -0.4 -2.0 FHA domain-containing protein compare
HMPREF1181_RS08755 -0.4 -3.3 elongation factor G compare
HMPREF1181_RS11485 -0.4 -1.2 hypothetical protein compare
HMPREF1181_RS00975 -0.4 -2.0 ComF family protein compare
HMPREF1181_RS13160 -0.4 -1.8 helix-turn-helix domain-containing protein compare
HMPREF1181_RS11855 -0.4 -3.5 TonB-dependent receptor compare
HMPREF1181_RS13340 -0.4 -3.0 tetratricopeptide repeat protein compare
HMPREF1181_RS14850 -0.4 -2.3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
HMPREF1181_RS10740 -0.4 -1.3 sigma-70 family RNA polymerase sigma factor compare
HMPREF1181_RS10165 -0.4 -1.0 hypothetical protein compare
HMPREF1181_RS07045 -0.4 -1.8 hypothetical protein compare
HMPREF1181_RS06130 -0.4 -2.8 glutamine-hydrolyzing GMP synthase compare
HMPREF1181_RS11850 -0.4 -3.4 hypothetical protein compare
HMPREF1181_RS12440 -0.4 -2.5 N-acetylglucosamine-6-phosphate deacetylase compare
HMPREF1181_RS15745 -0.4 -1.2 DUF4134 domain-containing protein compare
HMPREF1181_RS03640 -0.4 -3.3 DUF4136 domain-containing protein compare
HMPREF1181_RS01345 -0.4 -2.1 Lrp/AsnC ligand binding domain-containing protein compare
HMPREF1181_RS06625 -0.4 -1.3 DJ-1/PfpI family protein compare
HMPREF1181_RS06340 -0.4 -1.8 phosphoribosylformylglycinamidine cyclo-ligase compare
HMPREF1181_RS14155 -0.4 -1.6 hypothetical protein compare
HMPREF1181_RS06315 -0.4 -1.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE compare
HMPREF1181_RS16970 -0.4 -2.3 four helix bundle protein compare
HMPREF1181_RS05665 -0.4 -1.8 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HMPREF1181_RS06860 -0.4 -1.5 MBL fold metallo-hydrolase compare
HMPREF1181_RS07895 -0.4 -1.3 M23 family metallopeptidase compare
HMPREF1181_RS16290 -0.4 -1.2 DUF3575 domain-containing protein compare
HMPREF1181_RS01060 -0.4 -1.9 RNA polymerase sigma-70 factor compare
HMPREF1181_RS11540 -0.4 -1.3 conjugal transfer protein TraO compare
HMPREF1181_RS15910 -0.4 -1.3 single-stranded DNA-binding protein compare
HMPREF1181_RS14385 -0.4 -2.3 hypothetical protein compare
HMPREF1181_RS07600 -0.4 -2.2 FimB/Mfa2 family fimbrial subunit compare
HMPREF1181_RS11210 -0.4 -2.4 hypothetical protein compare
HMPREF1181_RS04770 -0.4 -1.4 single-stranded DNA-binding protein compare
HMPREF1181_RS07220 -0.4 -1.0 tRNA-OTHER compare
HMPREF1181_RS16305 -0.4 -3.3 translocation/assembly module TamB compare
HMPREF1181_RS11370 -0.4 -0.6 hypothetical protein compare
HMPREF1181_RS00265 -0.4 -2.1 23S ribosomal RNA compare
HMPREF1181_RS06385 -0.4 -2.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
HMPREF1181_RS00095 -0.4 -2.6 hypothetical protein compare
HMPREF1181_RS10195 -0.4 -2.2 SMI1/KNR4 family protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source complex media ABB in Bacteroides stercoris CC31F

For carbon source complex media ABB across organisms