Experiment set2S501 for Bacteroides stercoris CC31F

Compare to:

N-Acetyl-D-Glucosamine 10 mM carbon source

200 most important genes:

  gene name fitness t score description  
HMPREF1181_RS03440 -9.6 -6.6 pyrroline-5-carboxylate reductase compare
HMPREF1181_RS14140 -9.3 -5.9 3-isopropylmalate dehydratase small subunit compare
HMPREF1181_RS03315 -9.0 -6.2 N-acetylornithine carbamoyltransferase compare
HMPREF1181_RS03445 -9.0 -6.2 aspartate aminotransferase family protein compare
HMPREF1181_RS06570 -8.6 -5.9 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
HMPREF1181_RS00050 -8.5 -10.2 threonine synthase compare
HMPREF1181_RS03325 -8.2 -8.0 glutamate 5-kinase compare
HMPREF1181_RS14125 -8.2 -8.0 3-isopropylmalate dehydrogenase compare
HMPREF1181_RS11050 -8.2 -5.6 diaminopimelate decarboxylase compare
HMPREF1181_RS04850 -8.1 -9.6 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
HMPREF1181_RS03320 -8.1 -7.9 glutamate-5-semialdehyde dehydrogenase compare
HMPREF1181_RS03450 -8.0 -5.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
HMPREF1181_RS03460 -7.8 -5.4 argininosuccinate synthase compare
HMPREF1181_RS04650 -7.7 -7.5 dihydroorotase compare
HMPREF1181_RS14990 -7.6 -9.1 aspartate carbamoyltransferase compare
HMPREF1181_RS02880 -7.6 -5.3 M20 family metallo-hydrolase compare
HMPREF1181_RS01245 -7.5 -4.4 type II 3-dehydroquinate dehydratase compare
HMPREF1181_RS11075 -7.5 -10.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
HMPREF1181_RS02540 -7.5 -5.2 acetylglutamate kinase compare
HMPREF1181_RS08595 -7.4 -7.2 aspartate--ammonia ligase compare
HMPREF1181_RS04860 -7.4 -12.4 histidinol dehydrogenase compare
HMPREF1181_RS06565 -7.4 -7.2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HMPREF1181_RS00060 -7.4 -5.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
HMPREF1181_RS06575 -7.4 -5.1 prephenate dehydrogenase compare
HMPREF1181_RS00165 -7.3 -8.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HMPREF1181_RS14150 -7.3 -7.2 2-isopropylmalate synthase compare
HMPREF1181_RS07435 -7.3 -7.1 IMP dehydrogenase compare
HMPREF1181_RS03465 -7.3 -5.0 GNAT family N-acetyltransferase compare
HMPREF1181_RS06130 -7.2 -8.6 glutamine-hydrolyzing GMP synthase compare
HMPREF1181_RS03410 -7.2 -11.0 argininosuccinate lyase compare
HMPREF1181_RS03405 -7.1 -4.5 SRPBCC family protein compare
HMPREF1181_RS15350 -7.1 -11.8 tryptophan synthase subunit alpha compare
HMPREF1181_RS14145 -7.0 -11.8 3-isopropylmalate dehydratase large subunit compare
HMPREF1181_RS04855 -6.9 -15.5 histidinol-phosphate transaminase compare
HMPREF1181_RS11065 -6.8 -9.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
HMPREF1181_RS06355 -6.8 -4.7 orotidine-5'-phosphate decarboxylase compare
HMPREF1181_RS06560 -6.8 -6.7 prephenate dehydratase compare
HMPREF1181_RS14180 -6.7 -4.7 dihydroorotate dehydrogenase compare
HMPREF1181_RS14085 -6.6 -4.6 adenylosuccinate synthase compare
HMPREF1181_RS16865 -6.6 -4.6 D-3-phosphoglycerate dehydrogenase compare
HMPREF1181_RS11070 -6.6 -4.6 imidazole glycerol phosphate synthase subunit HisF compare
HMPREF1181_RS00055 -6.4 -4.5 cofactor-independent phosphoglycerate mutase compare
HMPREF1181_RS08325 -6.3 -10.5 acetolactate synthase small subunit compare
HMPREF1181_RS02530 -6.3 -4.3 shikimate kinase compare
HMPREF1181_RS14185 -6.2 -4.3 dihydroorotate dehydrogenase electron transfer subunit compare
HMPREF1181_RS08330 -5.9 -18.7 biosynthetic-type acetolactate synthase large subunit compare
HMPREF1181_RS01580 -5.8 -9.5 phosphoribosylamine--glycine ligase compare
HMPREF1181_RS08335 -5.8 -21.6 dihydroxy-acid dehydratase compare
HMPREF1181_RS08315 -5.7 -13.8 ketol-acid reductoisomerase compare
HMPREF1181_RS01780 -5.4 -14.5 acetyl-CoA hydrolase/transferase family protein compare
HMPREF1181_RS06310 -5.3 -4.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HMPREF1181_RS06320 -5.0 -3.1 shikimate dehydrogenase compare
HMPREF1181_RS05605 -5.0 -23.6 phosphoribosylformylglycinamidine synthase compare
HMPREF1181_RS07010 -5.0 -4.9 adenylosuccinate lyase compare
HMPREF1181_RS15325 -4.9 -11.3 anthranilate synthase component I family protein compare
HMPREF1181_RS15320 -4.9 -9.9 tryptophan synthase subunit beta compare
HMPREF1181_RS15335 -4.9 -7.4 anthranilate phosphoribosyltransferase compare
HMPREF1181_RS04440 -4.8 -9.1 MFS transporter compare
HMPREF1181_RS01140 -4.7 -18.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
HMPREF1181_RS09265 -4.6 -3.2 3-dehydroquinate synthase compare
HMPREF1181_RS06340 -4.6 -5.4 phosphoribosylformylglycinamidine cyclo-ligase compare
HMPREF1181_RS15340 -4.6 -7.0 indole-3-glycerol phosphate synthase TrpC compare
HMPREF1181_RS01145 -4.6 -9.7 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
HMPREF1181_RS15345 -4.5 -11.5 phosphoribosylanthranilate isomerase compare
HMPREF1181_RS12530 -4.5 -13.0 GDP-mannose 4,6-dehydratase compare
HMPREF1181_RS00940 -4.5 -2.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
HMPREF1181_RS04275 -4.5 -12.2 tetratricopeptide repeat protein compare
HMPREF1181_RS14995 -4.4 -7.5 aspartate carbamoyltransferase regulatory subunit compare
HMPREF1181_RS04865 -4.4 -7.9 ATP phosphoribosyltransferase compare
HMPREF1181_RS14135 -4.4 -10.2 2-isopropylmalate synthase compare
HMPREF1181_RS05800 -4.3 -6.6 hypothetical protein compare
HMPREF1181_RS08795 -4.3 -15.7 hypothetical protein compare
HMPREF1181_RS06100 -4.3 -11.1 DUF4270 domain-containing protein compare
HMPREF1181_RS15485 -4.3 -12.6 anaerobic ribonucleoside triphosphate reductase compare
HMPREF1181_RS15490 -4.3 -6.1 anaerobic ribonucleoside-triphosphate reductase activating protein compare
HMPREF1181_RS16385 -4.2 -5.0 tetratricopeptide repeat protein compare
HMPREF1181_RS06865 -4.2 -2.9 branched-chain amino acid aminotransferase compare
HMPREF1181_RS02275 -4.1 -2.7 4-hydroxy-tetrahydrodipicolinate reductase compare
HMPREF1181_RS09330 -4.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
HMPREF1181_RS12535 -4.0 -13.9 GDP-L-fucose synthase compare
HMPREF1181_RS06505 -4.0 -3.9 ribulose-phosphate 3-epimerase compare
HMPREF1181_RS14610 -4.0 -4.9 DUF4296 domain-containing protein compare
HMPREF1181_RS11080 -3.9 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
HMPREF1181_RS03400 -3.9 -3.8 orotate phosphoribosyltransferase compare
HMPREF1181_RS15010 -3.9 -12.5 serine hydroxymethyltransferase compare
HMPREF1181_RS06660 -3.8 -5.7 hypothetical protein compare
HMPREF1181_RS04800 -3.6 -14.3 CDP-alcohol phosphatidyltransferase family protein compare
HMPREF1181_RS13340 -3.5 -17.7 tetratricopeptide repeat protein compare
HMPREF1181_RS05890 -3.5 -13.8 glutamine synthetase III compare
HMPREF1181_RS03765 -3.4 -16.7 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1181_RS01325 -3.4 -14.1 glycosyltransferase compare
HMPREF1181_RS15095 -3.4 -11.5 UDP-glucose 4-epimerase GalE compare
HMPREF1181_RS00190 -3.3 -2.3 translocation/assembly module TamB domain-containing protein compare
HMPREF1181_RS16620 -3.3 -6.6 YebC/PmpR family DNA-binding transcriptional regulator compare
HMPREF1181_RS00185 -3.3 -2.3 BamA/TamA family outer membrane protein compare
HMPREF1181_RS04810 -3.3 -3.2 phosphatidylglycerophosphatase A compare
HMPREF1181_RS11305 -3.2 -8.9 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
HMPREF1181_RS15530 -3.2 -12.7 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1181_RS08190 -3.2 -5.6 cardiolipin synthase compare
HMPREF1181_RS15460 -3.2 -13.8 Na+/H+ antiporter NhaC family protein compare
HMPREF1181_RS15330 -3.1 -8.6 aminodeoxychorismate/anthranilate synthase component II compare
HMPREF1181_RS04125 -3.1 -9.9 hypothetical protein compare
HMPREF1181_RS10195 -3.1 -13.0 SMI1/KNR4 family protein compare
HMPREF1181_RS05610 -3.1 -12.5 response regulator compare
HMPREF1181_RS05780 -3.1 -5.5 SurA N-terminal domain-containing protein compare
HMPREF1181_RS04130 -3.1 -17.2 SLBB domain-containing protein compare
HMPREF1181_RS16950 -3.0 -11.0 RNA polymerase sigma factor compare
HMPREF1181_RS03235 -3.0 -5.6 elongation factor P compare
HMPREF1181_RS09130 -2.9 -16.6 magnesium transporter compare
HMPREF1181_RS06085 -2.9 -5.2 aspartate 1-decarboxylase compare
HMPREF1181_RS06190 -2.9 -5.0 tetratricopeptide repeat protein compare
HMPREF1181_RS06930 -2.8 -2.7 tRNA 2-thiouridine(34) synthase MnmA compare
HMPREF1181_RS01565 -2.6 -5.3 serine acetyltransferase compare
HMPREF1181_RS04815 -2.6 -11.9 inositol-3-phosphate synthase compare
HMPREF1181_RS01255 -2.5 -8.6 tetratricopeptide repeat protein compare
HMPREF1181_RS05725 -2.5 -8.3 DUF4831 family protein compare
HMPREF1181_RS07880 -2.4 -2.1 DUF4290 domain-containing protein compare
HMPREF1181_RS09350 -2.4 -4.2 immunity 17 family protein compare
HMPREF1181_RS13230 -2.4 -11.8 sodium ion-translocating decarboxylase subunit beta compare
HMPREF1181_RS08050 -2.4 -3.1 hypothetical protein compare
HMPREF1181_RS01095 -2.3 -13.6 type I DNA topoisomerase compare
HMPREF1181_RS01240 -2.3 -2.7 pyruvate kinase compare
HMPREF1181_RS16360 -2.2 -1.8 hypothetical protein compare
HMPREF1181_RS04805 -2.2 -6.9 GtrA family protein compare
HMPREF1181_RS15115 -2.2 -2.3 RnfABCDGE type electron transport complex subunit D compare
HMPREF1181_RS14245 -2.2 -5.6 agmatine deiminase family protein compare
HMPREF1181_RS13295 -2.2 -7.9 DUF4199 domain-containing protein compare
HMPREF1181_RS15235 -2.1 -3.7 UvrD-helicase domain-containing protein compare
HMPREF1181_RS04795 -2.1 -10.5 inositol phosphorylceramide synthase compare
HMPREF1181_RS05665 -2.0 -6.5 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HMPREF1181_RS03380 -2.0 -6.4 hypothetical protein compare
HMPREF1181_RS14025 -2.0 -2.7 acyl-CoA dehydrogenase family protein compare
HMPREF1181_RS15240 -1.9 -6.0 PD-(D/E)XK nuclease family protein compare
HMPREF1181_RS02535 -1.9 -6.3 biosynthetic arginine decarboxylase compare
HMPREF1181_RS01550 -1.9 -3.1 ribonuclease R compare
HMPREF1181_RS00420 -1.8 -3.9 type I methionyl aminopeptidase compare
HMPREF1181_RS00960 -1.8 -1.7 adenosine kinase compare
HMPREF1181_RS07465 -1.8 -9.1 RNA-binding protein compare
HMPREF1181_RS05475 -1.8 -6.8 Rossmann-like and DUF2520 domain-containing protein compare
HMPREF1181_RS10835 -1.8 -8.4 tetratricopeptide repeat protein compare
HMPREF1181_RS14620 -1.8 -4.3 TraR/DksA C4-type zinc finger protein compare
HMPREF1181_RS14235 -1.8 -5.1 carbon-nitrogen hydrolase compare
HMPREF1181_RS07450 -1.8 -4.5 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HMPREF1181_RS14385 -1.8 -8.2 hypothetical protein compare
HMPREF1181_RS14175 -1.8 -5.8 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
HMPREF1181_RS02865 -1.8 -6.2 tetratricopeptide repeat protein compare
HMPREF1181_RS14090 -1.8 -3.7 transcriptional repressor compare
HMPREF1181_RS04365 -1.7 -10.3 Gfo/Idh/MocA family oxidoreductase compare
HMPREF1181_RS13805 -1.7 -4.4 histone H1 compare
HMPREF1181_RS01730 -1.6 -7.3 class I SAM-dependent methyltransferase compare
HMPREF1181_RS04330 -1.6 -7.6 lipocalin-like domain-containing protein compare
HMPREF1181_RS11545 -1.6 -4.2 DUF3872 domain-containing protein compare
HMPREF1181_RS16410 -1.6 -7.3 ATP-dependent Clp protease ATP-binding subunit compare
HMPREF1181_RS05875 -1.6 -2.7 30S ribosomal protein S1 compare
HMPREF1181_RS05660 -1.6 -4.1 ATP-binding protein compare
HMPREF1181_RS14910 -1.6 -9.8 hypothetical protein compare
HMPREF1181_RS11085 -1.6 -4.1 formyltetrahydrofolate deformylase compare
HMPREF1181_RS10610 -1.6 -2.0 ABC transporter substrate-binding protein compare
HMPREF1181_RS01460 -1.6 -11.2 S41 family peptidase compare
HMPREF1181_RS04380 -1.6 -7.1 glycosyltransferase family 2 protein compare
HMPREF1181_RS10185 -1.5 -5.1 SMI1/KNR4 family protein compare
HMPREF1181_RS13360 -1.5 -7.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
HMPREF1181_RS16715 -1.5 -9.0 hypothetical protein compare
HMPREF1181_RS14925 -1.5 -9.5 lipopolysaccharide biosynthesis protein compare
HMPREF1181_RS07835 -1.5 -7.9 NADP-specific glutamate dehydrogenase compare
HMPREF1181_RS09385 -1.5 -4.2 nucleoside deaminase compare
HMPREF1181_RS04370 -1.5 -7.1 glycosyltransferase family 4 protein compare
HMPREF1181_RS16420 -1.5 -12.4 patatin-like phospholipase family protein compare
HMPREF1181_RS00330 -1.5 -8.2 TolC family protein compare
HMPREF1181_RS00325 -1.5 -8.9 efflux RND transporter periplasmic adaptor subunit compare
HMPREF1181_RS04375 -1.5 -5.8 EpsG family protein compare
HMPREF1181_RS05470 -1.5 -2.7 HAD-IIIA family hydrolase compare
HMPREF1181_RS14790 -1.5 -10.2 alpha amylase C-terminal domain-containing protein compare
HMPREF1181_RS11055 -1.5 -4.0 aspartate kinase compare
HMPREF1181_RS02105 -1.4 -8.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HMPREF1181_RS04405 -1.4 -5.0 sugar transferase compare
HMPREF1181_RS04350 -1.4 -6.1 glycosyltransferase compare
HMPREF1181_RS14345 -1.4 -5.4 tRNA guanosine(34) transglycosylase Tgt compare
HMPREF1181_RS01570 -1.4 -4.8 RNA methyltransferase compare
HMPREF1181_RS15655 -1.4 -3.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
HMPREF1181_RS15120 -1.4 -2.0 electron transport complex subunit RsxC compare
HMPREF1181_RS14895 -1.4 -8.3 glycosyltransferase compare
HMPREF1181_RS03470 -1.3 -1.8 arginine repressor compare
HMPREF1181_RS00020 -1.3 -2.5 mechanosensitive ion channel compare
HMPREF1181_RS06490 -1.3 -5.1 DUF4827 domain-containing protein compare
HMPREF1181_RS00790 -1.3 -6.1 mannose-1-phosphate guanylyltransferase compare
HMPREF1181_RS16705 -1.3 -5.5 glycosyltransferase compare
HMPREF1181_RS14935 -1.3 -8.8 ATP-grasp domain-containing protein compare
HMPREF1181_RS01260 -1.3 -6.4 AhpC/TSA family protein compare
HMPREF1181_RS12525 -1.3 -8.3 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
HMPREF1181_RS10590 -1.3 -2.3 cobalamin biosynthesis protein CbiD compare
HMPREF1181_RS14835 -1.3 -6.8 phosphatidylinositol-4-phosphate 5-kinase compare
HMPREF1181_RS14885 -1.3 -9.1 hypothetical protein compare
HMPREF1181_RS04355 -1.3 -4.8 LicD family protein compare
HMPREF1181_RS05750 -1.3 -2.7 tetratricopeptide repeat protein compare
HMPREF1181_RS03560 -1.3 -5.8 tRNA-Pro compare
HMPREF1181_RS14875 -1.3 -9.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
HMPREF1181_RS04435 -1.3 -4.2 galactose mutarotase compare
HMPREF1181_RS05105 -1.3 -1.4 hypothetical protein compare
HMPREF1181_RS07175 -1.2 -5.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Bacteroides stercoris CC31F in carbon source experiments

For carbon source N-Acetyl-D-Glucosamine across organisms