Experiment set2S434 for Bacteroides ovatus ATCC 8483

Compare to:

D-Glucosamine Hydrochloride 10 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BACOVA_05474 +4.5 9.6 glycosyl hydrolase, family 88 compare
BACOVA_05471 +2.9 7.5 Tat pathway signal sequence domain protein compare
BACOVA_05472 +2.8 6.0 arylsulfatase compare
BACOVA_05475 +2.3 5.5 SusD family protein compare
BACOVA_05478 +1.8 6.1 heparinase II/III-like protein compare
BACOVA_01643 +1.6 11.7 prokaryotic transcription elongation factor, GreA/GreB domain protein compare
BACOVA_03545 +1.4 9.6 hypothetical protein compare
BACOVA_05283 +1.4 2.3 hypothetical protein compare
BACOVA_05051 +1.3 6.9 hypothetical protein compare
BACOVA_00337 +1.3 5.8 ATP-dependent DNA helicase RecQ compare
BACOVA_04060 +1.3 4.5 acetyltransferase, GNAT family compare
BACOVA_03979 +1.2 4.6 Sigma-70 region 2 compare
BACOVA_04424 +1.1 3.2 nitroreductase family protein compare
BACOVA_04811 +1.0 7.2 sigma factor regulatory protein, FecR/PupR family compare
BACOVA_04085 +1.0 2.1 hypothetical protein compare
BACOVA_01207 +1.0 6.9 hypothetical protein compare
BACOVA_00323 +1.0 2.4 hypothetical protein compare
BACOVA_00353 +1.0 8.0 carbamoyl-phosphate synthase, large subunit compare
BACOVA_00389 +0.9 4.4 hypothetical protein compare
BACOVA_05074 +0.9 1.6 hypothetical protein compare
BACOVA_02444 +0.8 2.2 hypothetical protein compare
BACOVA_01006 +0.8 4.5 methionine aminopeptidase, type I compare
BACOVA_01498 +0.8 1.5 hypothetical protein compare
BACOVA_00352 +0.8 2.4 hypothetical protein compare
BACOVA_02442 +0.8 4.8 aspartate-alanine antiporter compare
BACOVA_04218 +0.8 2.2 hypothetical protein compare
BACOVA_03893 +0.8 1.6 hypothetical protein compare
BACOVA_00368 +0.8 1.2 hypothetical protein compare
BACOVA_00471 +0.8 1.3 conjugative transposon protein TraE compare
BACOVA_00866 +0.8 6.5 TonB-linked outer membrane protein, SusC/RagA family compare
BACOVA_00141 +0.8 2.0 oxidoreductase, short chain dehydrogenase/reductase family protein compare
BACOVA_03109 +0.8 2.9 hypothetical protein compare
BACOVA_05262 +0.7 3.6 cysteine-rich domain protein compare
BACOVA_01424 +0.7 1.4 hypothetical protein compare
BACOVA_02319 +0.7 1.4 hypothetical protein compare
BACOVA_04675 +0.7 2.2 hypothetical protein compare
BACOVA_01775 +0.7 4.5 tetratricopeptide repeat domain protein compare
BACOVA_01278 +0.7 2.9 hypothetical protein compare
BACOVA_05575 +0.7 2.3 hypothetical protein compare
BACOVA_00333 +0.7 2.5 hypothetical protein compare
BACOVA_01404 +0.7 1.8 hypothetical protein compare
BACOVA_03072 +0.7 2.1 hypothetical protein compare
BACOVA_05476 +0.7 4.8 TonB-linked outer membrane protein, SusC/RagA family conserved
BACOVA_03814 +0.7 2.0 hypothetical protein compare
BACOVA_00879 +0.7 2.0 putative DNA-binding protein compare
BACOVA_05441 +0.7 1.6 hypothetical protein compare
BACOVA_04465 +0.7 5.4 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein compare
BACOVA_05257 +0.7 2.1 hypothetical protein compare
BACOVA_04244 +0.7 2.8 putative DNA-binding protein compare
BACOVA_01422 +0.7 3.1 anaerobic ribonucleoside-triphosphate reductase compare
BACOVA_00202 +0.7 1.3 exonuclease compare
BACOVA_02601 +0.7 1.5 sigma-70, region 4 compare
BACOVA_01403 +0.7 2.8 hypothetical protein compare
BACOVA_04682 +0.7 1.0 hypothetical protein compare
BACOVA_01591 +0.6 1.3 hypothetical protein compare
BACOVA_05473 +0.6 3.3 heparinase II/III-like protein compare
BACOVA_03002 +0.6 2.5 hypothetical protein compare
BACOVA_04057 +0.6 1.8 recombination protein RecR compare
BACOVA_00640 +0.6 2.1 hypothetical protein compare
BACOVA_04286 +0.6 2.6 hypothetical protein compare
BACOVA_00865 +0.6 4.8 SusD family protein compare
BACOVA_02487 +0.6 4.4 AbgT transporter family compare
BACOVA_00402 +0.6 1.8 hypothetical protein compare
BACOVA_00802 +0.6 2.8 anaerobic ribonucleoside-triphosphate reductase activating protein compare
BACOVA_05587 +0.6 2.5 DNA-binding helix-turn-helix protein compare
BACOVA_01322 +0.6 2.2 Sigma-70 region 2 compare
BACOVA_04933 +0.6 1.7 hypothetical protein compare
BACOVA_03145 +0.6 1.3 hypothetical protein compare
BACOVA_02962 +0.6 2.9 hypothetical protein compare
BACOVA_01466 +0.6 1.2 hypothetical protein compare
BACOVA_02376 +0.6 1.1 tRNA-Leu compare
BACOVA_03574 +0.6 2.5 hypothetical protein compare
BACOVA_04714 +0.6 0.7 hypothetical protein compare
BACOVA_03990 +0.6 1.5 hypothetical protein compare
BACOVA_03241 +0.6 2.6 hypothetical protein compare
BACOVA_02900 +0.5 1.3 N-acetylmuramoyl-L-alanine amidase compare
BACOVA_04369 +0.5 3.1 nucleotidyl transferase compare
BACOVA_05477 +0.5 2.7 hypothetical protein compare
BACOVA_00077 +0.5 1.8 ATP synthase subunit C compare
BACOVA_01757 +0.5 1.2 putative toxin-antitoxin system, toxin component compare
BACOVA_04701 +0.5 1.1 hypothetical protein compare
BACOVA_00699 +0.5 3.1 Creatinase compare
BACOVA_02366 +0.5 2.2 hypothetical protein compare
BACOVA_04093 +0.5 3.7 sigma factor regulatory protein, FecR/PupR family compare
BACOVA_03276 +0.5 1.9 hypothetical protein compare
BACOVA_04059 +0.5 2.2 hypothetical protein compare
BACOVA_03132 +0.5 1.6 hypothetical protein compare
BACOVA_01049 +0.5 2.3 hypothetical protein compare
BACOVA_00758 +0.5 3.1 hypothetical protein compare
BACOVA_01327 +0.5 1.2 hypothetical protein compare
BACOVA_05391 +0.5 2.1 hypothetical protein compare
BACOVA_02477 +0.5 0.8 hypothetical protein compare
BACOVA_02411 +0.5 2.6 phosphoribosylglycinamide formyltransferase 2 compare
BACOVA_04482 +0.5 3.0 Alpha-L-fucosidase compare
BACOVA_03678 +0.5 3.0 polysaccharide biosynthesis protein compare
BACOVA_04650 +0.5 1.5 hypothetical protein compare
BACOVA_04994 +0.5 1.5 hypothetical protein compare
BACOVA_03681 +0.5 1.9 HpcH/HpaI aldolase/citrate lyase family protein compare
BACOVA_04574 +0.5 1.0 hypothetical protein compare
BACOVA_05277 +0.5 2.2 hypothetical protein compare
BACOVA_02570 +0.5 1.2 tRNA-guanine transglycosylase compare
BACOVA_00161 +0.5 1.9 hypothetical protein compare
BACOVA_00817 +0.5 1.2 hypothetical protein compare
BACOVA_01512 +0.5 1.2 hypothetical protein compare
BACOVA_04771 +0.5 1.2 hypothetical protein compare
BACOVA_01479 +0.5 1.2 hypothetical protein compare
BACOVA_04556 +0.5 0.8 hypothetical protein compare
BACOVA_04672 +0.5 1.6 hypothetical protein compare
BACOVA_01423 +0.5 1.3 anaerobic ribonucleoside-triphosphate reductase activating protein compare
BACOVA_03690 +0.5 2.4 transcription termination/antitermination factor NusG compare
BACOVA_02509 +0.5 2.4 hypothetical protein compare
BACOVA_04317 +0.5 2.1 pirin family protein compare
BACOVA_04137 +0.5 1.7 hypothetical protein compare
BACOVA_01728 +0.5 1.2 hypothetical protein compare
BACOVA_01574 +0.5 1.8 hypothetical protein compare
BACOVA_05256 +0.5 1.8 hypothetical protein compare
BACOVA_03036 +0.5 1.0 hypothetical protein compare
BACOVA_03560 +0.5 1.1 hypothetical protein compare
BACOVA_04767 +0.5 1.8 hypothetical protein compare
BACOVA_02647 +0.5 0.9 hypothetical protein compare
BACOVA_04209 +0.4 2.1 hypothetical protein compare
BACOVA_03689 +0.4 1.1 hypothetical protein compare
BACOVA_04009 +0.4 0.7 hypothetical protein compare
BACOVA_00816 +0.4 2.3 metallo-beta-lactamase domain protein compare
BACOVA_04790 +0.4 0.8 hypothetical protein compare
BACOVA_04302 +0.4 1.6 Sigma-70 region 2 compare
BACOVA_05131 +0.4 1.9 hypothetical protein compare
BACOVA_02897 +0.4 1.3 hypothetical protein compare
BACOVA_05583 +0.4 2.4 hypothetical protein compare
BACOVA_01191 +0.4 0.8 putative acyl carrier protein compare
BACOVA_04214 +0.4 0.9 hypothetical protein compare
BACOVA_04655 +0.4 1.4 hypothetical protein compare
BACOVA_01761 +0.4 0.7 hypothetical protein compare
BACOVA_02472 +0.4 2.9 undecaprenyl-phosphate glucose phosphotransferase compare
BACOVA_03221 +0.4 1.3 HDIG domain protein compare
BACOVA_03209 +0.4 2.1 hypothetical protein compare
BACOVA_03547 +0.4 3.2 protein-(glutamine-N5) methyltransferase, release factor-specific compare
BACOVA_05219 +0.4 1.1 hypothetical protein compare
BACOVA_00332 +0.4 1.8 ABC transporter, ATP-binding protein compare
BACOVA_01908 +0.4 1.7 hypothetical protein compare
BACOVA_04282 +0.4 0.9 hypothetical protein compare
BACOVA_01144 +0.4 2.3 transporter, MotA/TolQ/ExbB proton channel family protein compare
BACOVA_03675 +0.4 2.5 glycosyltransferase, group 2 family protein compare
BACOVA_04744 +0.4 1.4 hypothetical protein compare
BACOVA_03715 +0.4 1.2 hypothetical protein compare
BACOVA_00564 +0.4 1.1 hypothetical protein compare
BACOVA_01551 +0.4 0.8 hypothetical protein compare
BACOVA_02278 +0.4 0.8 hypothetical protein compare
BACOVA_05601 +0.4 1.8 Respiratory-chain NADH dehydrogenase 24 Kd subunit compare
BACOVA_03383 +0.4 1.3 hypothetical protein compare
BACOVA_05572 +0.4 1.6 hypothetical protein compare
BACOVA_01152 +0.4 0.9 peptidase, M23 family compare
BACOVA_02310 +0.4 0.9 hypothetical protein compare
BACOVA_00116 +0.4 3.4 putative glutamate/gamma-aminobutyrate antiporter compare
BACOVA_00550 +0.4 1.9 hypothetical protein compare
BACOVA_02232 +0.4 1.5 hypothetical protein compare
BACOVA_02290 +0.4 1.6 hypothetical protein compare
BACOVA_00968 +0.4 1.7 hypothetical protein compare
BACOVA_02538 +0.4 2.6 hydrolase, carbon-nitrogen family compare
BACOVA_00720 +0.4 2.8 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein compare
BACOVA_03892 +0.4 1.1 hypothetical protein compare
BACOVA_05331 +0.4 1.4 hypothetical protein compare
BACOVA_04999 +0.4 1.4 hypothetical protein compare
BACOVA_03685 +0.4 2.0 UDP-glucose/GDP-mannose dehydrogenase family, central domain protein compare
BACOVA_00406 +0.4 1.5 hypothetical protein compare
BACOVA_01934 +0.4 3.3 hypothetical protein compare
BACOVA_04873 +0.4 0.6 hypothetical protein compare
BACOVA_01240 +0.4 1.5 hypothetical protein compare
BACOVA_03793 +0.4 2.7 bacterial transferase hexapeptide repeat protein compare
BACOVA_02277 +0.4 1.3 CobQ/CobB/MinD/ParA nucleotide binding domain protein compare
BACOVA_01356 +0.4 0.7 hypothetical protein compare
BACOVA_04191 +0.4 2.4 transcriptional regulator, GntR family compare
BACOVA_00583 +0.4 2.2 RNA polymerase sigma factor, sigma-70 family compare
BACOVA_04560 +0.4 1.4 hypothetical protein compare
BACOVA_00111 +0.4 2.9 glutamate decarboxylase compare
BACOVA_04208 +0.4 2.9 hypothetical protein compare
BACOVA_01704 +0.4 2.1 methyltransferase, MtaA/CmuA family compare
BACOVA_01146 +0.4 1.2 TonB family domain protein compare
BACOVA_03084 +0.4 2.0 GTP-binding protein HflX compare
BACOVA_01582 +0.4 0.7 hypothetical protein compare
BACOVA_02274 +0.4 1.4 hypothetical protein compare
BACOVA_03585 +0.4 3.3 AMP-binding enzyme compare
BACOVA_02297 +0.4 1.5 hypothetical protein compare
BACOVA_00801 +0.4 3.2 anaerobic ribonucleoside-triphosphate reductase compare
BACOVA_03978 +0.4 1.5 LemA family protein compare
BACOVA_03751 +0.4 0.7 hypothetical protein compare
BACOVA_04654 +0.4 0.8 hypothetical protein compare
BACOVA_04642 +0.4 1.5 hypothetical protein compare
BACOVA_03527 +0.4 0.6 PASTA domain protein compare
BACOVA_02353 +0.4 2.1 hypothetical protein compare
BACOVA_02403 +0.4 1.9 transporter, major facilitator family protein compare
BACOVA_05436 +0.4 1.8 hypothetical protein compare
BACOVA_03404 +0.4 0.7 hypothetical protein compare
BACOVA_00263 +0.4 0.7 hypothetical protein compare
BACOVA_00765 +0.4 1.2 hypothetical protein compare
BACOVA_01731 +0.4 1.4 hypothetical protein compare
BACOVA_01104 +0.4 0.7 CoA binding domain protein compare
BACOVA_04986 +0.4 1.0 hypothetical protein compare
BACOVA_02572 +0.4 1.6 methyltransferase domain protein compare
BACOVA_01632 +0.4 2.3 LD-carboxypeptidase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-Glucosamine Hydrochloride in Bacteroides ovatus ATCC 8483

For carbon source D-Glucosamine Hydrochloride across organisms