Experiment set2S422 for Bacteroides ovatus ATCC 8483

Compare to:

marine_broth_2216 1 x carbon source complex media

200 most detrimental genes:

  gene name fitness t score description  
BACOVA_03251 +2.0 12.2 UbiC transcription regulator-associated domain protein compare
BACOVA_03252 +1.4 7.4 ROK family protein compare
BACOVA_03250 +1.4 7.7 putative mannose-6-phosphate isomerase, class I compare
BACOVA_05283 +1.3 2.4 hypothetical protein compare
BACOVA_02601 +1.3 2.8 sigma-70, region 4 compare
BACOVA_02306 +1.2 2.1 hypothetical protein compare
BACOVA_03893 +1.1 2.2 hypothetical protein compare
BACOVA_03629 +1.0 8.2 putative alpha-1,2-mannosidase compare
BACOVA_02376 +1.0 2.0 tRNA-Leu compare
BACOVA_03418 +0.9 2.3 hypothetical protein compare
BACOVA_04653 +0.9 2.8 DNA binding domain, excisionase family compare
BACOVA_03788 +0.9 2.4 hypothetical protein compare
BACOVA_05301 +0.9 2.0 hypothetical protein compare
BACOVA_03036 +0.9 2.7 hypothetical protein compare
BACOVA_02425 +0.8 1.2 hypothetical protein compare
BACOVA_02720 +0.8 1.2 hypothetical protein compare
BACOVA_04643 +0.8 3.3 hypothetical protein compare
BACOVA_04736 +0.7 3.7 peptidase, M23 family compare
BACOVA_00861 +0.7 1.9 hypothetical protein compare
BACOVA_04009 +0.7 1.6 hypothetical protein compare
BACOVA_04085 +0.7 1.4 hypothetical protein compare
BACOVA_03109 +0.7 3.1 hypothetical protein compare
BACOVA_01538 +0.7 5.0 MIP family channel protein compare
BACOVA_00155 +0.7 3.8 sigma factor regulatory protein, FecR/PupR family compare
BACOVA_00898 +0.7 5.1 hydrophobic domain protein compare
BACOVA_03351 +0.7 1.9 hypothetical protein compare
BACOVA_04218 +0.7 2.1 hypothetical protein compare
BACOVA_03145 +0.7 1.1 hypothetical protein compare
BACOVA_02586 +0.7 1.6 putative bacteriocin export ABC transporter, lactococcin 972 group compare
BACOVA_01149 +0.7 2.8 nucleic acid-binding domain protein compare
BACOVA_02935 +0.6 1.3 tRNA-Phe compare
BACOVA_04702 +0.6 2.3 ABC transporter, ATP-binding protein compare
BACOVA_05504 +0.6 1.9 transcription termination/antitermination factor NusG compare
BACOVA_03054 +0.6 1.5 multidrug resistance protein, SMR family compare
BACOVA_01936 +0.6 5.0 glycosyltransferase, group 2 family protein compare
BACOVA_00968 +0.6 2.4 hypothetical protein compare
BACOVA_00783 +0.6 2.9 hypothetical protein compare
BACOVA_02255 +0.6 2.5 oxidoreductase compare
BACOVA_03209 +0.6 3.3 hypothetical protein compare
BACOVA_01466 +0.6 1.3 hypothetical protein compare
BACOVA_01152 +0.6 1.1 peptidase, M23 family compare
BACOVA_04031 +0.6 2.0 hypothetical protein compare
BACOVA_01498 +0.6 1.1 hypothetical protein compare
BACOVA_02869 +0.6 0.5 transcriptional regulator, y4mF family compare
BACOVA_04300 +0.6 2.4 hypothetical protein compare
BACOVA_00879 +0.6 2.0 putative DNA-binding protein compare
BACOVA_04328 +0.6 1.9 hypothetical protein compare
BACOVA_03908 +0.6 2.1 hypothetical protein compare
BACOVA_01657 +0.6 3.0 hypothetical protein compare
BACOVA_03439 +0.6 2.7 hypothetical protein compare
BACOVA_02764 +0.6 1.2 hypothetical protein compare
BACOVA_05412 +0.6 3.0 hypothetical protein compare
BACOVA_03585 +0.5 4.4 AMP-binding enzyme compare
BACOVA_01935 +0.5 4.5 glycosyltransferase, group 2 family protein compare
BACOVA_01154 +0.5 3.1 hypothetical protein compare
BACOVA_03170 +0.5 2.3 hypothetical protein compare
BACOVA_01933 +0.5 1.4 hypothetical protein compare
BACOVA_02934 +0.5 0.9 hypothetical protein compare
BACOVA_00351 +0.5 2.2 hypothetical protein compare
BACOVA_01080 +0.5 1.8 hypothetical protein compare
BACOVA_04620 +0.5 1.0 hypothetical protein compare
BACOVA_01363 +0.5 1.6 hypothetical protein compare
BACOVA_00961 +0.5 2.8 hypothetical protein compare
BACOVA_00974 +0.5 1.0 hypothetical protein compare
BACOVA_04485 +0.5 1.2 hypothetical protein compare
BACOVA_00161 +0.5 2.2 hypothetical protein compare
BACOVA_02315 +0.5 1.8 MutS domain I protein compare
BACOVA_03448 +0.5 1.1 hypothetical protein compare
BACOVA_00507 +0.5 3.6 6-phosphogluconolactonase compare
BACOVA_01531 +0.5 2.8 hypothetical protein compare
BACOVA_01934 +0.5 4.1 hypothetical protein compare
BACOVA_04315 +0.5 4.0 hypothetical protein compare
BACOVA_00471 +0.5 1.1 conjugative transposon protein TraE compare
BACOVA_04740 +0.5 1.5 hypothetical protein compare
BACOVA_04680 +0.5 2.0 hypothetical protein compare
BACOVA_04574 +0.5 0.9 hypothetical protein compare
BACOVA_03689 +0.5 1.5 hypothetical protein compare
BACOVA_02422 +0.5 2.3 hypothetical protein compare
BACOVA_01403 +0.5 2.2 hypothetical protein compare
BACOVA_03715 +0.5 1.4 hypothetical protein compare
BACOVA_04035 +0.5 2.5 hypothetical protein compare
BACOVA_01786 +0.5 1.6 hypothetical protein compare
BACOVA_01541 +0.5 1.3 DNA-binding protein HU compare
BACOVA_04771 +0.5 1.2 hypothetical protein compare
BACOVA_05219 +0.5 1.3 hypothetical protein compare
BACOVA_00894 +0.5 3.1 transporter gate domain protein compare
BACOVA_01830 +0.5 1.4 hypothetical protein compare
BACOVA_01437 +0.5 2.4 hypothetical protein compare
BACOVA_02524 +0.5 1.9 hypothetical protein compare
BACOVA_05262 +0.5 2.1 cysteine-rich domain protein compare
BACOVA_03718 +0.5 1.8 hypothetical protein compare
BACOVA_05436 +0.5 2.3 hypothetical protein compare
BACOVA_02319 +0.5 0.7 hypothetical protein compare
BACOVA_01690 +0.5 1.9 hypothetical protein compare
BACOVA_01150 +0.5 1.9 helicase C-terminal domain protein compare
BACOVA_03898 +0.4 2.5 hypothetical protein compare
BACOVA_00596 +0.4 1.7 redoxin family protein compare
BACOVA_00348 +0.4 2.4 hypothetical protein compare
BACOVA_04223 +0.4 2.6 hypothetical protein compare
BACOVA_00779 +0.4 2.7 hypothetical protein compare
BACOVA_05273 +0.4 1.2 hypothetical protein compare
BACOVA_03929 +0.4 1.0 hypothetical protein compare
BACOVA_01681 +0.4 1.2 tetratricopeptide repeat protein compare
BACOVA_00726 +0.4 2.1 hypothetical protein compare
BACOVA_00699 +0.4 2.7 Creatinase compare
BACOVA_02277 +0.4 1.6 CobQ/CobB/MinD/ParA nucleotide binding domain protein compare
BACOVA_00219 +0.4 2.5 imidazoleglycerol phosphate synthase, cyclase subunit compare
BACOVA_01379 +0.4 1.7 hypothetical protein compare
BACOVA_05307 +0.4 1.7 hypothetical protein compare
BACOVA_01563 +0.4 3.7 tetratricopeptide repeat protein compare
BACOVA_01322 +0.4 1.8 Sigma-70 region 2 compare
BACOVA_05447 +0.4 1.3 hypothetical protein compare
BACOVA_02366 +0.4 1.5 hypothetical protein compare
BACOVA_04672 +0.4 1.0 hypothetical protein compare
BACOVA_01125 +0.4 3.2 ABC-2 type transporter compare
BACOVA_03353 +0.4 1.3 hypothetical protein compare
BACOVA_04990 +0.4 0.9 hypothetical protein compare
BACOVA_05583 +0.4 2.4 hypothetical protein compare
BACOVA_05300 +0.4 0.8 hypothetical protein compare
BACOVA_01580 +0.4 0.9 hypothetical protein compare
BACOVA_02276 +0.4 0.8 hypothetical protein compare
BACOVA_03946 +0.4 1.0 hypothetical protein compare
BACOVA_04932 +0.4 0.9 hypothetical protein compare
BACOVA_03201 +0.4 2.3 nitroreductase family protein compare
BACOVA_01113 +0.4 3.1 branched-chain-amino-acid transaminase compare
BACOVA_00115 +0.4 1.0 hypothetical protein compare
BACOVA_02897 +0.4 1.5 hypothetical protein compare
BACOVA_00078 +0.4 0.7 hypothetical protein compare
BACOVA_04677 +0.4 1.6 hypothetical protein compare
BACOVA_00406 +0.4 1.8 hypothetical protein compare
BACOVA_04086 +0.4 2.4 response regulator receiver domain protein compare
BACOVA_00457 +0.4 2.2 hypothetical protein compare
BACOVA_02403 +0.4 2.3 transporter, major facilitator family protein compare
BACOVA_00478 +0.4 1.5 hypothetical protein compare
BACOVA_02669 +0.4 1.8 hypothetical protein compare
BACOVA_00365 +0.4 1.6 hypothetical protein compare
BACOVA_00806 +0.4 0.7 hypothetical protein compare
BACOVA_05257 +0.4 1.3 hypothetical protein compare
BACOVA_00358 +0.4 1.0 tRNA-Val compare
BACOVA_01126 +0.4 3.1 ABC-2 type transporter compare
BACOVA_01552 +0.4 2.6 transcriptional regulator, AraC family compare
BACOVA_02516 +0.4 2.3 hypothetical protein compare
BACOVA_01067 +0.4 1.5 hypothetical protein compare
BACOVA_00403 +0.4 0.8 hypothetical protein compare
BACOVA_04255 +0.4 1.6 hypothetical protein compare
BACOVA_04014 +0.4 2.1 hypothetical protein compare
BACOVA_01916 +0.4 2.3 hypothetical protein compare
BACOVA_01472 +0.4 1.0 hypothetical protein compare
BACOVA_04915 +0.4 1.2 hypothetical protein compare
BACOVA_04765 +0.4 2.3 hypothetical protein compare
BACOVA_01539 +0.4 2.4 hypothetical protein compare
BACOVA_03244 +0.4 1.2 hypothetical protein compare
BACOVA_01881 +0.4 1.1 hypothetical protein compare
BACOVA_02790 +0.4 1.2 hypothetical protein compare
BACOVA_01929 +0.4 2.9 hypothetical protein compare
BACOVA_03949 +0.4 0.9 hypothetical protein compare
BACOVA_05275 +0.4 1.5 transcriptional regulator, Spx/MgsR family compare
BACOVA_01728 +0.4 1.3 hypothetical protein compare
BACOVA_00378 +0.4 1.7 rubredoxin compare
BACOVA_04313 +0.4 0.7 hypothetical protein compare
BACOVA_01191 +0.4 1.0 putative acyl carrier protein compare
BACOVA_01065 +0.4 1.6 hypothetical protein compare
BACOVA_05346 +0.4 1.5 hypothetical protein compare
BACOVA_01622 +0.4 0.7 Na/Pi-cotransporter II-like protein compare
BACOVA_04008 +0.4 0.9 putative DNA-binding protein compare
BACOVA_03679 +0.4 2.3 branched-chain-amino-acid transaminase compare
BACOVA_04686 +0.4 1.0 hypothetical protein compare
BACOVA_05210 +0.4 0.6 preprotein translocase, SecG subunit compare
BACOVA_03688 +0.4 3.0 polysaccharide biosynthesis protein compare
BACOVA_02660 +0.4 2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BACOVA_02722 +0.4 2.1 acyl-CoA thioester hydrolase, YbgC/YbaW family compare
BACOVA_00832 +0.4 2.4 hypothetical protein compare
BACOVA_03520 +0.4 2.8 alpha amylase, catalytic domain protein compare
BACOVA_00640 +0.4 1.5 hypothetical protein compare
BACOVA_04556 +0.4 0.8 hypothetical protein compare
BACOVA_05236 +0.4 0.8 hypothetical protein compare
BACOVA_01393 +0.4 2.1 hypothetical protein compare
BACOVA_05441 +0.4 0.8 hypothetical protein compare
BACOVA_05258 +0.4 2.0 hypothetical protein compare
BACOVA_01584 +0.4 2.2 ABC transporter, ATP-binding protein compare
BACOVA_00083 +0.4 2.2 ABC transporter, permease protein compare
BACOVA_03906 +0.4 0.8 hypothetical protein compare
BACOVA_03587 +0.4 1.9 pyrroline-5-carboxylate reductase compare
BACOVA_05032 +0.4 1.7 nucleotidyltransferase domain protein compare
BACOVA_05305 +0.4 2.4 hypothetical protein compare
BACOVA_02196 +0.4 1.6 hypothetical protein compare
BACOVA_01178 +0.4 1.7 hypothetical protein compare
BACOVA_05136 +0.4 1.8 hypothetical protein compare
BACOVA_00780 +0.3 1.2 hypothetical protein compare
BACOVA_05426 +0.3 1.3 hypothetical protein compare
BACOVA_04401 +0.3 2.4 sigma factor regulatory protein, FecR/PupR family compare
BACOVA_02414 +0.3 1.1 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein compare
BACOVA_00437 +0.3 1.8 hypothetical protein compare
BACOVA_04649 +0.3 1.0 hypothetical protein compare
BACOVA_04971 +0.3 0.7 hypothetical protein compare
BACOVA_00528 +0.3 0.6 hypothetical protein compare
BACOVA_04298 +0.3 1.6 oxidoreductase, 2-nitropropane dioxygenase family protein compare
BACOVA_01932 +0.3 2.8 glycosyltransferase family 6 compare
BACOVA_04033 +0.3 0.8 hypothetical protein compare
BACOVA_03760 +0.3 1.2 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source complex media marine_broth_2216 in Bacteroides ovatus ATCC 8483

For carbon source complex media marine_broth_2216 across organisms