Experiment set2S417 for Bacteroides ovatus ATCC 8483

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Pectin from citrus peel; filtered 1 mg/ml carbon source

Group: carbon source
Media: Varel_Bryant_medium + Pectin from citrus peel; filtered (1 mg/mL)
Culturing: Bovatus_ATCC8483_ML6, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Surya on 10/30/24
Media components: 15 uM Hemin, 134 uM L-Methionine, 15 uM Iron (II) sulfate heptahydrate, 8.25 mM L-Cysteine, 23.8 mM Sodium bicarbonate, Mineral 3B solution (6.6 mM Potassium phosphate monobasic, 15.4 mM Sodium Chloride, 98 uM Magnesium chloride hexahydrate, 176.5 uM Calcium chloride dihydrate, 4.2 uM Cobalt chloride hexahydrate, 50.5 uM Manganese (II) chloride tetrahydrate, 9.3 mM Ammonium chloride, 1.75 mM Sodium sulfate)

Specific Phenotypes

For 5 genes in this experiment

For carbon source Pectin from citrus peel; filtered in Bacteroides ovatus ATCC 8483

For carbon source Pectin from citrus peel; filtered across organisms

SEED Subsystems

Subsystem #Specific
D-Galacturonate and D-Glucuronate Utilization 1
L-rhamnose utilization 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.