Experiment set2S33 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

200 most important genes:

  gene name fitness t score description  
OLJFJH_12070 -7.2 -9.9 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_12050 -6.6 -3.1 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_12075 -6.3 -14.1 Amylovoran biosynthesis protein AmsL compare
OLJFJH_17635 -6.2 -12.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_12065 -6.0 -9.4 colanic acid biosynthesis pyruvyl transferase WcaK compare
OLJFJH_06785 -6.0 -17.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_05615 -6.0 -2.6 Conserved uncharacterized protein compare
OLJFJH_12040 -5.9 -8.1 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_17720 -5.9 -8.8 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_01395 -5.7 -11.6 carbamoyl-phosphate synthase large subunit compare
OLJFJH_15175 -5.7 -17.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_06130 -5.6 -22.4 argininosuccinate lyase compare
OLJFJH_07335 -5.6 -18.2 ornithine carbamoyltransferase compare
OLJFJH_10645 -5.5 -4.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_06120 -5.5 -4.6 acetylglutamate kinase compare
OLJFJH_06125 -5.5 -15.1 argininosuccinate synthase compare
OLJFJH_10590 -5.4 -9.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_06780 -5.4 -16.9 phosphoribosylamine--glycine ligase compare
OLJFJH_04030 -5.4 -14.6 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_11280 -5.3 -14.9 amidophosphoribosyltransferase compare
OLJFJH_06115 -5.3 -14.3 acetylornithine deacetylase compare
OLJFJH_09115 -5.1 -13.3 amino-acid N-acetyltransferase compare
OLJFJH_01400 -5.0 -15.7 carbamoyl phosphate synthase small subunit compare
OLJFJH_12160 -5.0 -1.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_08880 -4.9 -12.6 diaminopimelate decarboxylase compare
OLJFJH_06480 -4.7 -21.5 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_10305 -4.7 -19.6 phosphoribosylformylglycinamidine synthase compare
OLJFJH_13345 -4.6 -4.3 4-oxalomesaconate tautomerase compare
OLJFJH_12045 -4.6 -2.2 Amylovoran biosynthesis protein AmsC compare
OLJFJH_12155 -4.6 -6.7 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_12035 -4.2 -26.0 Putative tyrosine-protein kinase AmsA compare
OLJFJH_06105 -4.1 -14.0 methylenetetrahydrofolate reductase compare
OLJFJH_01300 -4.0 -5.7 3-isopropylmalate dehydratase small subunit compare
OLJFJH_13355 -4.0 -9.6 4-oxalmesaconate hydratase compare
OLJFJH_12170 -4.0 -11.2 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_05770 -4.0 -4.8 orotate phosphoribosyltransferase compare
OLJFJH_15990 -4.0 -9.0 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_12180 -3.9 -18.6 histidinol dehydrogenase compare
OLJFJH_12175 -3.9 -11.9 histidinol-phosphate transaminase compare
OLJFJH_03580 -3.8 -1.2 transcriptional repressor LexA compare
OLJFJH_05730 -3.8 -0.8 hypothetical protein compare
OLJFJH_06995 -3.8 -3.5 Z-ring associated protein ZapG compare
OLJFJH_10500 -3.7 -2.6 IMP dehydrogenase compare
OLJFJH_12025 -3.7 -15.2 Amylovoran export outer membrane protein AmsH compare
OLJFJH_11230 -3.5 -4.4 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_13350 -3.5 -7.6 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_13570 -3.5 -8.8 orotidine-5'-phosphate decarboxylase compare
OLJFJH_07675 -3.5 -12.9 outer membrane channel protein TolC compare
OLJFJH_12030 -3.5 -14.1 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OLJFJH_12165 -3.4 -7.0 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_07330 -3.4 -15.2 aspartate carbamoyltransferase compare
OLJFJH_17630 -3.4 -1.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_16980 -3.4 -15.9 citrate synthase compare
OLJFJH_15670 -3.3 -7.7 dihydroorotase compare
OLJFJH_12965 -3.3 -2.1 Lysine exporter LysO compare
OLJFJH_13470 -3.3 -14.8 tryptophan synthase subunit alpha compare
OLJFJH_06475 -3.3 -7.9 HTH-type transcriptional regulator MetR compare
OLJFJH_05495 -3.2 -12.6 nitrogen regulation protein NR(I) compare
OLJFJH_01485 -3.2 -13.2 threonine synthase compare
OLJFJH_13475 -3.2 -18.2 tryptophan synthase subunit beta compare
OLJFJH_16950 -3.1 -2.1 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_15515 -3.0 -7.4 aminodeoxychorismate lyase compare
OLJFJH_17880 -3.0 -2.0 transcriptional regulator compare
OLJFJH_01295 -3.0 -15.3 3-isopropylmalate dehydratase large subunit compare
OLJFJH_17775 -2.9 -13.3 EamA-like transporter family compare
OLJFJH_12885 -2.9 -8.8 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_01290 -2.8 -19.9 3-isopropylmalate dehydrogenase compare
OLJFJH_10215 -2.7 -7.4 RNA polymerase sigma factor RpoE compare
OLJFJH_08835 -2.7 -3.7 site-specific tyrosine recombinase XerD compare
OLJFJH_03650 -2.7 -16.4 homoserine O-succinyltransferase compare
OLJFJH_06095 -2.7 -12.5 cystathionine gamma-synthase compare
OLJFJH_13480 -2.7 -8.7 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_15720 -2.6 -15.7 glucan biosynthesis glucosyltransferase H compare
OLJFJH_10855 -2.6 -13.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_10860 -2.6 -2.3 phosphocarrier protein Hpr compare
OLJFJH_12185 -2.5 -6.6 ATP phosphoribosyltransferase compare
OLJFJH_01595 -2.5 -7.5 phosphoserine phosphatase compare
OLJFJH_08875 -2.5 -10.2 LysR family transcriptional regulator compare
OLJFJH_05470 -2.5 -1.5 DNA polymerase I compare
OLJFJH_12150 -2.5 -5.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_16935 -2.5 -11.5 succinate--CoA ligase subunit alpha compare
OLJFJH_11455 -2.5 -1.0 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_02090 -2.4 -9.6 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_07060 -2.4 -6.0 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_06985 -2.4 -13.6 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_04160 -2.4 -4.3 two-component system response regulator OmpR compare
OLJFJH_08735 -2.4 -10.1 phosphoglycerate dehydrogenase compare
OLJFJH_06225 -2.4 -15.5 branched-chain-amino-acid transaminase compare
OLJFJH_18015 -2.3 -5.8 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_16940 -2.3 -8.5 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_01490 -2.3 -11.7 homoserine kinase compare
OLJFJH_17130 -2.3 -1.0 tRNA-Gln compare
OLJFJH_06245 -2.2 -14.8 ketol-acid reductoisomerase compare
OLJFJH_10700 -2.2 -1.1 type IV secretion protein Rhs compare
OLJFJH_16180 -2.2 -7.1 cell division protein FtsK compare
OLJFJH_17850 -2.1 -11.9 efflux transporter periplasmic adaptor subunit compare
OLJFJH_15725 -2.1 -7.6 glucan biosynthesis protein G compare
OLJFJH_00645 -2.1 -1.6 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
OLJFJH_08795 -2.1 -11.8 hydrolase compare
OLJFJH_06230 -2.1 -15.1 dihydroxy-acid dehydratase compare
OLJFJH_14370 -2.1 -1.5 electron transport complex subunit RsxC compare
OLJFJH_06735 -2.1 -11.5 thiamine phosphate synthase compare
OLJFJH_15115 -2.0 -1.5 YgdI/YgdR family lipoprotein compare
OLJFJH_01895 -2.0 -7.6 type VI secretion system baseplate subunit TssK compare
OLJFJH_11930 -2.0 -8.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_07070 -2.0 -7.5 RNA polymerase factor sigma-54 compare
OLJFJH_10685 -2.0 -1.5 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_10585 -2.0 -13.8 phosphoribosylglycinamide formyltransferase compare
OLJFJH_10165 -2.0 -1.5 RnfH family protein compare
OLJFJH_16955 -2.0 -2.7 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_05955 -2.0 -11.4 6-phosphofructokinase compare
OLJFJH_11445 -2.0 -3.0 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_13485 -2.0 -7.3 Anthranilate phosphoribosyltransferase compare
OLJFJH_07820 -2.0 -13.1 cystathionine beta-lyase compare
OLJFJH_14045 -1.9 -2.4 transcriptional regulator compare
OLJFJH_11050 -1.9 -2.5 tRNA-Arg compare
OLJFJH_01285 -1.9 -10.6 2-isopropylmalate synthase compare
OLJFJH_06515 -1.9 -1.3 twin-arginine translocase subunit TatA compare
OLJFJH_05635 -1.8 -1.6 beta family protein compare
OLJFJH_03260 -1.8 -9.9 translation factor (SUA5) compare
OLJFJH_10850 -1.8 -3.1 PTS glucose transporter subunit IIA compare
OLJFJH_07025 -1.7 -12.1 sulfite reductase subunit alpha compare
OLJFJH_11425 -1.7 -2.1 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_04305 -1.7 -0.8 DUF2756 domain-containing protein compare
OLJFJH_17960 -1.7 -7.7 endopeptidase La compare
OLJFJH_17855 -1.7 -11.3 multidrug efflux RND transporter permease subunit AcrB compare
OLJFJH_06535 -1.7 -2.5 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_09065 -1.7 -1.1 thymidylate synthase compare
OLJFJH_12105 -1.7 -2.3 ABC transporter permease compare
OLJFJH_06740 -1.6 -11.9 phosphomethylpyrimidine synthase ThiC compare
OLJFJH_11460 -1.6 -9.5 NADH-quinone oxidoreductase subunit L compare
OLJFJH_05510 -1.6 -5.2 ribosome-dependent GTPase TypA compare
OLJFJH_09310 -1.6 -5.8 phosphoadenylyl-sulfate reductase compare
OLJFJH_06640 -1.6 -2.9 elongation factor Tu compare
OLJFJH_00690 -1.6 -4.6 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_02410 -1.6 -3.1 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_13495 -1.6 -8.0 anthranilate synthase component 1 compare
OLJFJH_04080 -1.6 -3.0 adenine-specific DNA-methyltransferase compare
OLJFJH_10220 -1.6 -0.7 anti-sigma-E factor RseA compare
OLJFJH_11465 -1.6 -7.8 NADH-quinone oxidoreductase subunit M compare
OLJFJH_06975 -1.6 -2.8 transcriptional regulator ArgR compare
OLJFJH_05860 -1.5 -5.1 glycosyl transferase compare
OLJFJH_00745 -1.5 -8.8 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_11450 -1.5 -4.2 NADH-quinone oxidoreductase subunit J compare
OLJFJH_05915 -1.5 -10.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
OLJFJH_05910 -1.5 -5.4 protein-export chaperone SecB compare
OLJFJH_05500 -1.5 -6.7 nitrogen regulation protein NR(II) compare
OLJFJH_16315 -1.5 -2.9 YbjN domain-containing protein compare
OLJFJH_13240 -1.5 -4.6 asparaginase compare
OLJFJH_06525 -1.5 -2.2 Sec-independent protein translocase subunit TatC compare
OLJFJH_09570 -1.5 -3.5 nicotinamide-nucleotide amidase compare
OLJFJH_07030 -1.5 -12.3 glutamate synthase large subunit compare
OLJFJH_11415 -1.5 -7.4 NADH-quinone oxidoreductase subunit B compare
OLJFJH_16610 -1.5 -1.5 protein YohO compare
OLJFJH_17090 -1.4 -2.3 N-acetylglucosamine-6-phosphate deacetylase compare
OLJFJH_07825 -1.4 -4.9 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_13530 -1.4 -1.9 HTH-type transcriptional regulator CysB compare
OLJFJH_16960 -1.4 -5.7 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_01865 -1.4 -5.7 type VI secretion system contractile sheath large subunit compare
OLJFJH_03725 -1.4 -9.3 Trk system potassium transporter TrkA compare
OLJFJH_13650 -1.4 -5.9 peptide ABC transporter permease SapC compare
OLJFJH_06415 -1.4 -4.6 tyrosine recombinase XerC compare
OLJFJH_18010 -1.4 -5.3 cytochrome o ubiquinol oxidase subunit I compare
OLJFJH_12850 -1.4 -1.6 crossover junction endodeoxyribonuclease RuvC compare
OLJFJH_16780 -1.3 -3.7 6-phosphogluconolactonase compare
OLJFJH_16870 -1.3 -1.1 glycosyltransferase compare
OLJFJH_11625 -1.3 -3.5 Conserved uncharacterized protein compare
OLJFJH_16040 -1.3 -8.5 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_15450 -1.3 -6.6 Glycine zipper 2TM domain-containing protein compare
OLJFJH_06235 -1.3 -10.4 threonine ammonia-lyase biosynthetic compare
OLJFJH_11420 -1.3 -5.4 NADH-quinone oxidoreductase subunit C/D compare
OLJFJH_01880 -1.3 -6.3 Regulator of T6SS expression TagF TagF/ImpM/SciT family (unrelated to teichoic acid polymerase TagF of B-subtilis COG1887) compare
OLJFJH_13115 -1.3 -2.1 septum site-determining protein MinD compare
OLJFJH_11595 -1.3 -4.6 FAD:protein FMN transferase ApbE compare
OLJFJH_01495 -1.3 -8.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
OLJFJH_18020 -1.2 -2.4 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_10465 -1.2 -1.8 outer membrane protein assembly factor BamB compare
OLJFJH_06570 -1.2 -6.6 Trk system potassium transporter TrkH compare
OLJFJH_15705 -1.2 -4.1 lipid A biosynthesis lauroyl acyltransferase compare
OLJFJH_11470 -1.2 -5.6 NADH-quinone oxidoreductase subunit NuoN compare
OLJFJH_03950 -1.2 -0.7 DUF2387 domain-containing protein compare
OLJFJH_13490 -1.2 -2.4 anthranilate synthase component II compare
OLJFJH_15555 -1.2 -1.3 23S rRNA accumulation protein YceD compare
OLJFJH_09375 -1.2 -4.5 murein hydrolase activator NlpD compare
OLJFJH_04370 -1.2 -4.0 permease-like cell division protein FtsX compare
OLJFJH_11275 -1.2 -3.8 colicin V production protein compare
OLJFJH_09575 -1.2 -2.4 recombinase RecA compare
OLJFJH_16965 -1.1 -3.0 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_03965 -1.1 -7.8 ABC transporter ATP-binding protein compare
OLJFJH_07320 -1.1 -3.7 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_02225 -1.1 -1.4 EnvZ/OmpR regulon moderator MzrA compare
OLJFJH_01890 -1.1 -4.9 DotU family type VI secretion system protein compare
OLJFJH_14950 -1.1 -5.2 redox-regulated ATPase YchF compare
OLJFJH_08645 -1.1 -7.6 transketolase compare
OLJFJH_04155 -1.1 -2.8 two-component system sensor histidine kinase EnvZ compare
OLJFJH_07830 -1.1 -2.4 TonB system transport protein ExbD compare
OLJFJH_01870 -1.1 -2.2 Type VI secretion system core protein compare
OLJFJH_13785 -1.1 -2.3 DUF333 domain-containing protein compare
OLJFJH_13440 -1.1 -1.3 TonB system transport protein TonB compare
OLJFJH_10485 -1.1 -2.6 Emfourin compare


Specific Phenotypes

For 3 genes in this experiment