Experiment set2S273 for Escherichia coli ECRC101

Compare to:

WM_EV240

200 most important genes:

  gene name fitness t score description  
MCAODC_05060 rfbA -6.8 -6.6 glucose-1-phosphate thymidylyltransferase RfbA compare
MCAODC_06195 rfaL -6.5 -4.5 O-antigen ligase RfaL compare
MCAODC_14020 arnD -6.2 -4.3 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase compare
MCAODC_06185 rfaJ -6.2 -7.4 glucosyltransferase compare
MCAODC_20530 wcaA -6.2 -4.1 glycosyl transferase compare
MCAODC_08475 lptC -6.0 -5.8 LPS export ABC transporter periplasmic protein LptC compare
MCAODC_05065 rffG -5.9 -7.0 dTDP-glucose 4,6-dehydratase compare
MCAODC_20540 -5.9 -12.6 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
MCAODC_05085 wecA -5.8 -14.7 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
MCAODC_05050 rffA -5.8 -9.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MCAODC_13715 -5.8 -6.9 Protein DedA compare
MCAODC_20535 galF -5.7 -5.5 UTP--glucose-1-phosphate uridylyltransferase GalF compare
MCAODC_12000 purL -5.6 -20.2 phosphoribosylformylglycinamidine synthase compare
MCAODC_13650 prmB -5.6 -10.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
MCAODC_26380 nagA -5.5 -3.8 N-acetylglucosamine-6-phosphate deacetylase compare
MCAODC_09775 yggS -5.5 -9.2 pyridoxal phosphate homeostasis protein compare
MCAODC_18945 proQ -5.3 -3.7 RNA chaperone ProQ compare
MCAODC_03815 purD -5.3 -13.2 Phosphoribosylamine--glycine ligase compare
MCAODC_20475 perB -5.3 -3.6 GDP-perosamine N-acetyltransferase compare
MCAODC_12340 purM -5.2 -6.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MCAODC_20485 manC2 -5.2 -3.5 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_26315 pgm -5.0 -13.8 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
MCAODC_08200 fis -4.9 -3.3 DNA-binding transcriptional regulator Fis compare
MCAODC_05055 rffC -4.9 -8.7 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
MCAODC_22475 -4.8 -3.1 hypothetical protein compare
MCAODC_04770 rfaH -4.7 -6.6 transcription/translation regulatory transformer protein RfaH compare
MCAODC_02775 miaA -4.7 -4.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
MCAODC_12460 purC -4.7 -12.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
MCAODC_10975 cysC -4.6 -11.6 Adenylyl-sulfate kinase compare
MCAODC_10905 cysH -4.6 -8.7 phosphoadenosine phosphosulfate reductase compare
MCAODC_04590 typA -4.5 -14.9 ribosome-dependent GTPase TypA compare
MCAODC_23585 -4.5 -1.8 Membrane protein compare
MCAODC_09320 tolC -4.5 -6.9 outer membrane channel protein TolC compare
MCAODC_27055 purE -4.5 -5.7 N5-carboxyaminoimidazole ribonucleotide mutase compare
MCAODC_06170 rfaP -4.4 -3.1 lipopolysaccharide core heptose(I) kinase RfaP compare
MCAODC_13755 purF -4.4 -14.0 amidophosphoribosyltransferase compare
MCAODC_14300 napD -4.4 -4.3 chaperone NapD compare
MCAODC_03810 purH -4.4 -13.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
MCAODC_08625 nusA -4.4 -2.4 Transcription termination/antitermination protein NusA compare
MCAODC_26040 tolQ -4.4 -3.0 Tol-Pal system protein TolQ compare
MCAODC_17770 manA -4.3 -2.2 mannose-6-phosphate isomerase compare
MCAODC_12335 purN -4.3 -12.2 phosphoribosylglycinamide formyltransferase compare
MCAODC_12290 guaB -4.3 -4.2 IMP dehydrogenase compare
MCAODC_03675 pgi -4.3 -2.9 glucose-6-phosphate isomerase compare
MCAODC_05285 mioC -4.2 -8.5 FMN-binding protein MioC compare
MCAODC_08350 sspA -4.2 -7.1 stringent starvation protein A compare
MCAODC_14010 arnE -4.2 -7.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MCAODC_17855 rsxA -4.2 -2.7 electron transport complex subunit RsxA compare
MCAODC_14005 arnF -4.2 -9.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MCAODC_06165 rfaG -4.2 -2.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MCAODC_08565 greA -4.1 -5.1 transcription elongation factor GreA compare
MCAODC_20525 wzy -4.0 -3.9 O157 family O-antigen polymerase compare
MCAODC_27060 purK -3.9 -8.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
MCAODC_02450 fbp -3.9 -11.2 class 1 fructose-bisphosphatase compare
MCAODC_08450 ptsN -3.8 -2.6 PTS IIA-like nitrogen regulatory protein PtsN compare
MCAODC_12295 guaA -3.6 -2.5 glutamine-hydrolyzing GMP synthase compare
MCAODC_19155 nudB -3.5 -4.1 dihydroneopterin triphosphate diphosphatase compare
MCAODC_13655 aroC -3.5 -6.5 chorismate synthase compare
MCAODC_16435 yncG -3.4 -2.3 Uncharacterized GST-like protein YncG compare
MCAODC_01715 serB -3.4 -7.0 phosphoserine phosphatase compare
MCAODC_08205 dusB -3.4 -10.7 tRNA dihydrouridine synthase DusB compare
MCAODC_20480 cpsG -3.4 -2.3 colanic acid biosynthesis phosphomannomutase CpsG compare
MCAODC_18125 lpp -3.4 -1.3 murein lipoprotein Lpp compare
MCAODC_21675 rssB -3.3 -4.0 two-component system response regulator RssB compare
MCAODC_10895 cysJ -3.3 -12.2 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
MCAODC_14015 arnT -3.3 -13.0 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
MCAODC_23535 terW -3.2 -2.1 tellurium resistance protein TerW compare
MCAODC_02550 cysQ -3.2 -7.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MCAODC_10900 cysI -3.2 -8.5 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
MCAODC_14170 nrdA -3.2 -1.8 ribonucleoside-diphosphate reductase subunit alpha compare
MCAODC_20490 wbdQ -3.2 -1.6 GDP-mannose mannosyl hydrolase WbdQ/WbhG compare
MCAODC_27545 -3.2 -4.4 Lon protease compare
MCAODC_13750 cvpA -3.1 -4.8 colicin V production protein compare
MCAODC_17175 -3.1 -1.9 replication protein compare
MCAODC_00995 acnB -3.0 -2.1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_08510 mlaC -3.0 -9.9 phospholipid-binding protein MlaC compare
MCAODC_21670 galU -3.0 -2.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MCAODC_13685 fabB -2.9 -2.3 beta-ketoacyl-ACP synthase I compare
MCAODC_17880 rsxE -2.9 -2.6 electron transport complex subunit RsxE compare
MCAODC_06920 gorA -2.9 -9.6 glutathione-disulfide reductase compare
MCAODC_26385 nagC -2.9 -6.1 DNA-binding transcriptional regulator NagC compare
MCAODC_25180 ybjN -2.9 -3.4 Uncharacterized protein YbjN compare
MCAODC_19500 cysE -2.9 -2.0 serine acetyltransferase compare
MCAODC_22830 mfd -2.8 -8.5 transcription-repair coupling factor compare
MCAODC_17870 rsxD -2.8 -7.7 electron transport complex subunit RsxD compare
MCAODC_09220 bacA -2.8 -7.5 undecaprenyl-diphosphate phosphatase compare
MCAODC_07520 -2.7 -3.3 NfuA family Fe-S biogenesis protein compare
MCAODC_09980 serA -2.7 -9.1 phosphoglycerate dehydrogenase compare
MCAODC_27555 clpX -2.7 -1.8 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_25840 -2.7 -2.0 DUF1382 domain-containing protein compare
MCAODC_10085 fldB -2.7 -3.6 flavodoxin FldB compare
MCAODC_26025 tolB -2.6 -5.0 Tol-Pal system protein TolB compare
MCAODC_13565 mlaA -2.6 -8.2 phospholipid-binding lipoprotein MlaA compare
MCAODC_24055 -2.6 -1.8 YccE compare
MCAODC_14790 -2.6 -1.6 DUF1382 domain-containing protein compare
MCAODC_24855 ihfB -2.6 -1.7 integration host factor subunit beta compare
MCAODC_00860 dksA -2.6 -7.0 RNA polymerase-binding protein DksA compare
MCAODC_25935 galE -2.6 -5.6 UDP-glucose 4-epimerase GalE compare
MCAODC_02405 treC -2.5 -1.7 alpha,alpha-phosphotrehalase compare
MCAODC_06215 yibB -2.5 -5.7 protein YibB compare
MCAODC_21590 yciI -2.5 -2.2 YciI family protein compare
MCAODC_02745 purA -2.4 -2.4 adenylosuccinate synthase compare
MCAODC_19720 fliN -2.4 -2.7 flagellar motor switch protein FliN compare
MCAODC_25015 cspD -2.4 -3.1 cold shock-like protein CspD compare
MCAODC_26810 fepG -2.4 -4.2 iron-enterobactin ABC transporter permease compare
MCAODC_28035 lacI -2.4 -4.9 DNA-binding transcriptional repressor LacI compare
MCAODC_08495 mlaF -2.4 -8.9 phospholipid ABC transporter ATP-binding protein MlaF compare
MCAODC_26020 pal -2.4 -3.7 peptidoglycan-associated lipoprotein Pal compare
MCAODC_05040 rffT -2.4 -6.5 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MCAODC_18940 prc -2.3 -8.5 carboxy terminal-processing peptidase compare
MCAODC_24880 serC -2.3 -6.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
MCAODC_20450 hisF -2.3 -4.2 Imidazole glycerol phosphate synthase subunit HisF compare
MCAODC_11320 ygaZ -2.3 -5.6 L-valine exporter subunit YgaZ compare
MCAODC_08500 mlaE -2.2 -6.7 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
MCAODC_06955 pitA -2.2 -2.2 inorganic phosphate transporter PitA compare
MCAODC_26815 fepC -2.2 -2.5 ferrienterobactin ABC transporter ATPase compare
MCAODC_13720 accD -2.2 -1.5 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
MCAODC_09425 ftsP -2.2 -2.3 cell division protein FtsP compare
MCAODC_15360 -2.2 -2.1 hypothetical protein compare
MCAODC_17275 -2.2 -2.9 T3SS effector NleG compare
MCAODC_26795 fepB -2.2 -6.5 ferrienterobactin ABC transporter periplasmic binding protein compare
MCAODC_24965 lrp -2.1 -5.3 leucine-responsive transcriptional regulator Lrp compare
MCAODC_18255 ydiT -2.1 -1.6 Ferredoxin-like protein YdiT compare
MCAODC_26030 tolA -2.1 -2.5 cell envelope integrity protein TolA compare
MCAODC_26805 fepD -2.1 -5.2 ferrienterobactin ABC transporter permease compare
MCAODC_16780 lsrG -2.1 -1.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MCAODC_16950 nleG2-3 -2.1 -1.9 DUF1076 domain-containing protein compare
MCAODC_08505 mlaD -2.1 -9.4 outer membrane lipid asymmetry maintenance protein MlaD compare
MCAODC_05430 -2.1 -1.8 Putative type III effector protein compare
MCAODC_13710 truA -2.1 -3.9 aspartate-semialdehyde dehydrogenase compare
MCAODC_09485 exbD -2.1 -4.2 TonB system transport protein ExbD compare
MCAODC_19060 kdgA -2.1 -1.4 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
MCAODC_13595 sixA -2.0 -1.5 phosphohistidine phosphatase SixA compare
MCAODC_07225 rsmD -2.0 -4.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
MCAODC_12720 ptsI -1.9 -1.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_11285 gshA -1.9 -5.7 glutamate--cysteine ligase compare
MCAODC_17675 ynfL -1.9 -2.2 Uncharacterized HTH-type transcriptional regulator YnfL compare
MCAODC_21030 gatA -1.9 -1.4 PTS galactitol transporter subunit IIA compare
MCAODC_17860 rsxB -1.9 -2.0 electron transport complex subunit RsxB compare
MCAODC_15060 -1.9 -1.9 phage tail tape measure protein compare
MCAODC_14915 rusA -1.9 -1.1 crossover junction endodeoxyribonuclease RusA compare
MCAODC_05890 espH -1.9 -2.0 type III secretion system LEE effector EspH compare
MCAODC_09085 higA -1.9 -1.5 type II toxin-antitoxin system antitoxin HigA compare
MCAODC_26835 fes -1.9 -6.3 enterobactin/ferric enterobactin esterase compare
MCAODC_23280 yeeS -1.8 -1.0 UPF0758 protein YeeS compare
MCAODC_05090 -1.8 -4.0 hypothetical protein compare
MCAODC_07710 cysG -1.8 -7.9 siroheme synthase CysG compare
MCAODC_21730 -1.8 -4.0 hypothetical protein compare
MCAODC_19430 -1.8 -2.3 hypothetical protein compare
MCAODC_01200 cra -1.8 -6.1 catabolite repressor/activator compare
MCAODC_08160 yhdV -1.8 -1.3 Uncharacterized protein YhdV compare
MCAODC_06205 rfaF -1.8 -1.2 ADP-heptose--LPS heptosyltransferase RfaF compare
MCAODC_04965 hemX -1.8 -7.2 uroporphyrinogen-III C-methyltransferase compare
MCAODC_16845 marR -1.8 -4.3 multiple antibiotic resistance transcriptional regulator MarR compare
MCAODC_09160 Ile2_trna -1.8 -1.6 tRNA-Ile2(cat) compare
MCAODC_23345 -1.8 -2.0 hypothetical protein compare
MCAODC_05845 sepD -1.7 -1.4 type III secretion system LEE switch protein SepD compare
MCAODC_17865 rsxC -1.7 -5.9 electron transport complex subunit RsxC compare
MCAODC_21585 tonB -1.7 -3.1 TonB system transport protein TonB compare
MCAODC_10780 mazE -1.7 -1.2 type II toxin-antitoxin system antitoxin MazE compare
MCAODC_04600 glnA -1.7 -3.0 glutamate--ammonia ligase compare
MCAODC_06515 hokA -1.7 -2.2 type I toxin-antitoxin system toxin HokA compare
MCAODC_15815 -1.7 -2.1 DUF2543 domain-containing protein compare
MCAODC_19435 marR -1.7 -2.7 MarR family transcriptional regulator compare
MCAODC_20600 wcaF -1.7 -2.9 colanic acid biosynthesis acetyltransferase WcaF compare
MCAODC_06190 rfaB -1.7 -3.8 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
MCAODC_26840 fepA -1.6 -9.7 ferrienterobactin outer membrane transporter compare
MCAODC_23890 fabG -1.6 -1.1 oxidoreductase compare
MCAODC_02760 hflK -1.6 -3.4 FtsH protease activity modulator HflK compare
MCAODC_01360 apaH -1.6 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
MCAODC_16110 -1.6 -3.7 hypothetical protein compare
MCAODC_14800 -1.6 -1.2 cruciferin compare
MCAODC_00350 -1.6 -1.5 Ankyrin repeat containing virulence factor compare
MCAODC_23560 tnpB -1.6 -2.1 IS66 family insertion sequence element accessory protein TnpB compare
MCAODC_04330 pfkA -1.6 -1.9 6-phosphofructokinase compare
MCAODC_20155 -1.6 -1.2 DUF1482 domain-containing protein compare
MCAODC_06270 cysE -1.6 -0.9 serine O-acetyltransferase compare
MCAODC_04480 yiiE -1.6 -1.6 Uncharacterized protein YiiE compare
MCAODC_14810 bet -1.6 -1.8 phage recombination protein Bet compare
MCAODC_09835 speB -1.5 -5.0 agmatinase compare
MCAODC_21305 -1.5 -1.0 phage tail tape measure protein compare
MCAODC_17160 -1.5 -2.1 hypothetical protein compare
MCAODC_14900 ybcN -1.5 -2.4 DNA base-flipping protein YbcN compare
MCAODC_16265 -1.5 -1.9 Regulatory protein mokB compare
MCAODC_05995 -1.5 -0.8 toxin compare
MCAODC_16355 hicB -1.5 -1.9 type II toxin-antitoxin system antitoxin HicB compare
MCAODC_21570 yciC -1.5 -2.6 envelope biogenesis factor ElyC compare
MCAODC_08415 arcB -1.5 -2.8 aerobic respiration two-component sensor histidine kinase ArcB compare
MCAODC_16415 mcbR -1.5 -1.4 colanic acid/biofilm transcriptional regulator McbR compare
MCAODC_09825 speA -1.5 -6.1 biosynthetic arginine decarboxylase compare
MCAODC_08710 yhbQ -1.5 -1.2 DNA damage response exodeoxyribonuclease YhbQ compare
MCAODC_20445 hisA -1.4 -1.8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase compare
MCAODC_05400 pstB -1.4 -1.0 phosphate ABC transporter ATP-binding protein PstB compare
MCAODC_23000 flgI -1.4 -2.7 flagellar basal body P-ring protein FlgI compare
MCAODC_04940 yifL -1.4 -2.9 Uncharacterized lipoprotein YifL compare
MCAODC_02675 ulaR -1.4 -4.1 HTH-type transcriptional regulator UlaR compare
MCAODC_11930 lepA -1.4 -2.1 translation elongation factor 4 compare
MCAODC_24875 aroA -1.4 -6.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MCAODC_18295 nlpC -1.4 -2.2 putative endopeptidase NlpC compare
MCAODC_22020 ybcY -1.4 -2.3 Putative uncharacterized protein YbcY compare


Specific Phenotypes

For 1 genes in this experiment

For phage Phage in Escherichia coli ECRC101

For phage Phage across organisms