Experiment set2S257 for Azospirillum sp. SherDot2

Compare to:

NF_with_fullN

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_05361 +2.1 12.7 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_01113 +1.7 9.2 Adaptive-response sensory-kinase SasA compare
MPMX19_04368 +1.7 14.9 Glutathione amide reductase compare
MPMX19_02392 +1.7 15.2 Aspartate/prephenate aminotransferase compare
MPMX19_01914 +1.6 12.8 hypothetical protein compare
MPMX19_06050 +1.5 14.2 Phosphoenolpyruvate carboxylase compare
MPMX19_02674 +1.5 4.7 NADH:quinone reductase compare
MPMX19_00236 +1.4 5.7 HTH-type transcriptional regulator IscR compare
MPMX19_04276 +1.4 2.6 hypothetical protein compare
MPMX19_04112 +1.4 5.9 hypothetical protein compare
MPMX19_01277 +1.4 8.6 hypothetical protein compare
MPMX19_06723 +1.4 6.4 hypothetical protein compare
MPMX19_04114 +1.3 4.6 hypothetical protein compare
MPMX19_00649 +1.3 6.1 Phosphoadenosine phosphosulfate reductase compare
MPMX19_01939 +1.2 6.0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_06276 +1.2 5.2 hypothetical protein compare
MPMX19_04257 +1.2 7.7 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase compare
MPMX19_01890 +1.2 8.4 Glyoxalase ElbB compare
MPMX19_01777 +1.2 7.6 2-aminoadipate transaminase compare
MPMX19_02058 +1.2 3.3 hypothetical protein compare
MPMX19_01276 +1.1 8.9 NAD(P) transhydrogenase subunit beta compare
MPMX19_04000 +1.1 5.5 Flagellar motor switch protein FliG compare
MPMX19_00840 +1.1 4.0 Pyridoxine 5'-phosphate synthase compare
MPMX19_00651 +1.1 7.6 hypothetical protein compare
MPMX19_00260 +1.1 2.9 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00262 +1.1 3.4 Thiazole synthase compare
MPMX19_00835 +1.0 7.3 D-erythronate 4-phosphate dehydrogenase compare
MPMX19_01278 +1.0 6.8 NAD(P) transhydrogenase subunit alpha part 1 compare
MPMX19_05235 +1.0 3.9 HTH-type transcriptional regulator BetI compare
MPMX19_00647 +1.0 8.8 Bifunctional enzyme CysN/CysC compare
MPMX19_00680 +1.0 2.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_00050 +1.0 3.5 Pyridoxal phosphate homeostasis protein compare
MPMX19_00648 +1.0 7.2 Sulfate adenylyltransferase subunit 2 compare
MPMX19_02116 +1.0 2.2 Cold shock protein CspA compare
MPMX19_06933 +1.0 2.5 Manganese transport system ATP-binding protein MntB compare
MPMX19_04910 +1.0 5.9 hypothetical protein compare
MPMX19_06730 +1.0 8.8 hypothetical protein compare
MPMX19_02247 +1.0 8.5 Peptide methionine sulfoxide reductase MsrA compare
MPMX19_02531 +1.0 2.2 hypothetical protein compare
MPMX19_05690 +1.0 6.4 Protein phosphotransferase ChpT compare
MPMX19_04347 +1.0 3.9 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_04218 +1.0 4.5 Protein phosphatase PrpC compare
MPMX19_01053 +1.0 3.6 Dihydroorotase compare
MPMX19_05332 +1.0 5.7 HTH-type transcriptional regulator GntR compare
MPMX19_06928 +1.0 2.7 hypothetical protein compare
MPMX19_02177 +1.0 4.7 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_05357 +1.0 8.1 hypothetical protein compare
MPMX19_03618 +1.0 4.0 hypothetical protein compare
MPMX19_06904 +0.9 3.2 putative tautomerase compare
MPMX19_05531 +0.9 5.3 Serine acetyltransferase compare
MPMX19_04899 +0.9 7.4 3-methylmercaptopropionyl-CoA dehydrogenase compare
MPMX19_06547 +0.9 5.0 hypothetical protein compare
MPMX19_01499 +0.9 3.1 hypothetical protein compare
MPMX19_00010 +0.9 4.4 Transcriptional regulatory protein OmpR compare
MPMX19_00544 +0.9 1.6 hypothetical protein compare
MPMX19_02937 +0.9 2.3 hypothetical protein compare
MPMX19_06545 +0.9 7.9 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_05827 +0.9 7.5 hypothetical protein compare
MPMX19_00530 +0.9 2.5 Orotate phosphoribosyltransferase compare
MPMX19_06544 +0.9 7.3 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_04094 +0.9 6.6 Flagellar M-ring protein compare
MPMX19_05411 +0.9 7.1 Periplasmic alpha-galactoside-binding protein compare
MPMX19_04913 +0.9 1.4 hypothetical protein compare
MPMX19_01479 +0.9 4.8 hypothetical protein compare
MPMX19_01483 +0.8 6.0 Flagellar basal-body rod protein FlgG compare
MPMX19_00864 +0.8 3.9 Flagellar hook-basal body complex protein FliE compare
MPMX19_05358 +0.8 1.6 hypothetical protein compare
MPMX19_01531 +0.8 6.5 hypothetical protein compare
MPMX19_03276 +0.8 1.7 hypothetical protein compare
MPMX19_00112 +0.8 2.0 Multidrug transporter EmrE compare
MPMX19_00866 +0.8 5.2 Flagellar biosynthetic protein FliR compare
MPMX19_02020 +0.8 3.6 hypothetical protein compare
MPMX19_05412 +0.8 5.6 Glutathione import ATP-binding protein GsiA compare
MPMX19_00933 +0.8 2.0 hypothetical protein compare
MPMX19_05918 +0.8 2.8 Flagellar biosynthetic protein FliP compare
MPMX19_01796 +0.8 1.5 hypothetical protein compare
MPMX19_04008 +0.8 1.4 Beta-peptidyl aminopeptidase BapA compare
MPMX19_00237 +0.8 3.2 Cysteine synthase compare
MPMX19_00854 +0.8 7.1 hypothetical protein compare
MPMX19_05800 +0.8 5.5 hypothetical protein compare
MPMX19_05364 +0.8 3.7 Acetate CoA-transferase subunit beta compare
MPMX19_04560 +0.8 2.4 hypothetical protein compare
MPMX19_00048 +0.8 4.1 hypothetical protein compare
MPMX19_01495 +0.8 1.6 hypothetical protein compare
MPMX19_03734 +0.8 1.2 RutC family protein YjgH compare
MPMX19_01243 +0.7 1.8 hypothetical protein compare
MPMX19_05998 +0.7 4.3 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase compare
MPMX19_01201 +0.7 3.3 hypothetical protein compare
MPMX19_01484 +0.7 3.8 Flagellar basal-body rod protein FlgG compare
MPMX19_04092 +0.7 5.0 Flagellar motor switch protein FliN compare
MPMX19_04466 +0.7 2.7 hypothetical protein compare
MPMX19_04904 +0.7 6.2 Alpha-2-macroglobulin compare
MPMX19_00650 +0.7 4.9 Siroheme synthase compare
MPMX19_02951 +0.7 1.5 Deoxyribose-phosphate aldolase 1 compare
MPMX19_03916 +0.7 1.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_06734 +0.7 6.5 Alginate biosynthesis protein AlgA compare
MPMX19_05813 +0.7 2.5 2-hydroxy-3-oxopropionate reductase compare
MPMX19_03298 +0.7 1.4 hypothetical protein compare
MPMX19_04900 +0.7 5.6 putative 3-hydroxyacyl-CoA dehydrogenase compare
MPMX19_00311 +0.7 6.3 hypothetical protein compare
MPMX19_02524 +0.7 5.1 tRNA pseudouridine synthase B compare
MPMX19_05731 +0.7 3.0 hypothetical protein compare
MPMX19_06014 +0.7 4.4 Histidinol-phosphate aminotransferase compare
MPMX19_00600 +0.7 3.2 hypothetical protein compare
MPMX19_05789 +0.7 4.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase compare
MPMX19_06580 +0.7 3.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01481 +0.7 5.8 Flagellar motor switch protein FliM compare
MPMX19_04200 +0.7 4.0 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_03729 +0.7 3.5 Peptidoglycan-associated lipoprotein compare
MPMX19_00025 +0.7 1.5 hypothetical protein compare
MPMX19_03846 +0.7 2.2 hypothetical protein compare
MPMX19_05581 +0.7 1.4 hypothetical protein compare
MPMX19_00414 +0.7 2.2 Pyruvate dehydrogenase complex repressor compare
MPMX19_00868 +0.7 6.2 Sensor kinase CckA compare
MPMX19_04421 +0.7 4.5 Chitooligosaccharide deacetylase ChbG compare
MPMX19_06230 +0.7 2.0 hypothetical protein compare
MPMX19_05826 +0.7 1.7 hypothetical protein compare
MPMX19_05808 +0.7 3.5 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA compare
MPMX19_01978 +0.7 1.2 hypothetical protein compare
MPMX19_04419 +0.7 5.2 Periplasmic dipeptide transport protein compare
MPMX19_05680 +0.7 3.2 Cell cycle response regulator CtrA compare
MPMX19_04206 +0.7 3.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_05224 +0.7 1.5 hypothetical protein compare
MPMX19_06817 +0.7 2.2 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_01882 +0.7 4.1 Ribonuclease BN compare
MPMX19_06508 +0.7 2.3 Nitrilotriacetate monooxygenase component A compare
MPMX19_05675 +0.7 2.7 HTH-type transcriptional regulator YjiE compare
MPMX19_04732 +0.7 2.7 hypothetical protein compare
MPMX19_06885 +0.7 1.8 Nitrate import ATP-binding protein NrtD compare
MPMX19_02988 +0.6 2.5 hypothetical protein compare
MPMX19_06655 +0.6 5.1 hypothetical protein compare
MPMX19_02634 +0.6 2.5 DNA-binding transcriptional regulator BolA compare
MPMX19_06278 +0.6 4.4 S-sulfocysteine synthase compare
MPMX19_01648 +0.6 2.1 hypothetical protein compare
MPMX19_06883 +0.6 2.3 Choline trimethylamine-lyase activating enzyme compare
MPMX19_03127 +0.6 1.6 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX19_03536 +0.6 2.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06577 +0.6 5.0 hypothetical protein compare
MPMX19_00351 +0.6 4.0 hypothetical protein compare
MPMX19_04418 +0.6 5.0 Dipeptide transport system permease protein DppB compare
MPMX19_06202 +0.6 0.9 hypothetical protein compare
MPMX19_06954 +0.6 1.9 hypothetical protein compare
MPMX19_05203 +0.6 1.6 hypothetical protein compare
MPMX19_04664 +0.6 2.4 hypothetical protein compare
MPMX19_00858 +0.6 3.1 Flagellar biosynthetic protein FliP compare
MPMX19_03800 +0.6 1.7 hypothetical protein compare
MPMX19_06483 +0.6 3.3 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_06773 +0.6 2.3 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_00652 +0.6 5.5 Sulfite reductase [ferredoxin] compare
MPMX19_02300 +0.6 3.3 Transcription elongation factor GreA compare
MPMX19_02514 +0.6 1.5 hypothetical protein compare
MPMX19_04415 +0.6 4.0 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_05601 +0.6 2.3 putative ABC transporter ATP-binding protein YejF compare
MPMX19_05748 +0.6 1.9 Response regulator SaeR compare
MPMX19_05350 +0.6 4.0 hypothetical protein compare
MPMX19_04417 +0.6 4.8 Dipeptide transport system permease protein DppC compare
MPMX19_02011 +0.6 2.4 RNA helicase CrhR compare
MPMX19_06866 +0.6 1.6 HTH-type transcriptional regulator NimR compare
MPMX19_00011 +0.6 3.4 Adaptive-response sensory-kinase SasA compare
MPMX19_05528 +0.6 2.7 hypothetical protein compare
MPMX19_05119 +0.6 4.7 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_06522 +0.6 2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06236 +0.6 1.9 hypothetical protein compare
MPMX19_04898 +0.6 2.7 Transcriptional regulatory protein LnrK compare
MPMX19_04199 +0.6 3.9 Pseudaminic acid synthase compare
MPMX19_03747 +0.6 1.9 Potassium-transporting ATPase KdpC subunit compare
MPMX19_04622 +0.6 4.1 hypothetical protein compare
MPMX19_01897 +0.6 5.4 hypothetical protein compare
MPMX19_04469 +0.6 2.1 hypothetical protein compare
MPMX19_01485 +0.6 4.2 hypothetical protein compare
MPMX19_04953 +0.6 2.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_04564 +0.6 3.5 hypothetical protein compare
MPMX19_00016 +0.6 4.8 Adenosine deaminase compare
MPMX19_02205 +0.6 3.9 Uracil phosphoribosyltransferase compare
MPMX19_06506 +0.6 1.3 hypothetical protein compare
MPMX19_04901 +0.6 3.2 3-ketoacyl-CoA thiolase compare
MPMX19_01497 +0.6 1.7 hypothetical protein compare
MPMX19_05076 +0.6 2.8 Carboxymethylenebutenolidase compare
MPMX19_06498 +0.6 2.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01005 +0.6 2.3 hypothetical protein compare
MPMX19_04579 +0.6 2.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_05402 +0.6 2.7 hypothetical protein compare
MPMX19_01157 +0.6 3.1 hypothetical protein compare
MPMX19_00862 +0.6 3.8 hypothetical protein compare
MPMX19_01047 +0.6 2.0 Transcriptional regulatory protein ros compare
MPMX19_04522 +0.6 1.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03844 +0.6 3.6 Protein YrdA compare
MPMX19_04089 +0.6 4.8 Flagellar biosynthesis protein FlhA compare
MPMX19_06471 +0.6 1.9 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_04246 +0.6 1.8 hypothetical protein compare
MPMX19_04205 +0.6 2.0 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03640 +0.6 2.5 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase compare
MPMX19_02852 +0.5 2.1 hypothetical protein compare
MPMX19_03699 +0.5 1.5 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_05874 +0.5 2.3 2-keto-4-pentenoate hydratase compare
MPMX19_05410 +0.5 4.3 Dipeptide transport system permease protein DppB compare
MPMX19_03475 +0.5 2.9 Putative acid--amine ligase YgiC compare
MPMX19_05082 +0.5 1.8 hypothetical protein compare
MPMX19_01679 +0.5 2.3 hypothetical protein compare
MPMX19_05111 +0.5 1.7 PqqA binding protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with_fulln experiments