Experiment set2S256 for Azospirillum sp. SherDot2

Compare to:

NF_with_fullN

200 most important genes:

  gene name fitness t score description  
MPMX19_02629 -2.9 -17.3 hypothetical protein compare
MPMX19_01401 -2.6 -3.0 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_01402 -2.5 -11.0 hypothetical protein compare
MPMX19_04390 -2.4 -2.8 hypothetical protein compare
MPMX19_06546 -2.4 -1.6 hypothetical protein compare
MPMX19_00128 -2.4 -15.7 hypothetical protein compare
MPMX19_02138 -2.4 -10.6 Psp operon transcriptional activator compare
MPMX19_01141 -2.2 -5.0 hypothetical protein compare
MPMX19_01139 -2.2 -8.6 hypothetical protein compare
MPMX19_01140 -2.1 -9.6 hypothetical protein compare
MPMX19_02134 -2.0 -6.0 Phage shock protein C compare
MPMX19_03450 -2.0 -2.3 hypothetical protein compare
MPMX19_02135 -2.0 -6.6 Phage shock protein B compare
MPMX19_03906 -1.9 -9.6 Pca regulon regulatory protein compare
MPMX19_02543 -1.9 -3.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_04431 -1.9 -11.2 hypothetical protein compare
MPMX19_04124 -1.9 -5.4 hypothetical protein compare
MPMX19_01142 -1.9 -5.8 hypothetical protein compare
MPMX19_06001 -1.9 -3.4 hypothetical protein compare
MPMX19_05954 -1.8 -5.5 hypothetical protein compare
MPMX19_00705 -1.7 -4.4 Cell division coordinator CpoB compare
MPMX19_02137 -1.7 -5.3 hypothetical protein compare
MPMX19_01283 -1.6 -3.2 hypothetical protein compare
MPMX19_05534 -1.6 -2.8 DNA gyrase inhibitor YacG compare
MPMX19_01454 -1.6 -2.5 hypothetical protein compare
MPMX19_06539 -1.6 -2.3 hypothetical protein compare
MPMX19_01766 -1.6 -7.0 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_05023 -1.6 -1.8 hypothetical protein compare
MPMX19_01729 -1.6 -2.9 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_02267 -1.6 -2.5 hypothetical protein compare
MPMX19_04551 -1.5 -2.0 HTH-type transcriptional repressor RspR compare
MPMX19_00710 -1.5 -10.2 hypothetical protein compare
MPMX19_02981 -1.5 -4.5 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02136 -1.4 -2.1 Phage shock protein A compare
MPMX19_06520 -1.4 -2.3 Nitrate import ATP-binding protein NrtC compare
MPMX19_03631 -1.4 -1.6 hypothetical protein compare
MPMX19_04644 -1.4 -2.1 hypothetical protein compare
MPMX19_01249 -1.4 -2.9 Periplasmic serine endoprotease DegP compare
MPMX19_06009 -1.4 -2.6 hypothetical protein compare
MPMX19_00849 -1.3 -2.7 hypothetical protein compare
MPMX19_06277 -1.3 -7.4 hypothetical protein compare
MPMX19_01613 -1.3 -2.8 hypothetical protein compare
MPMX19_05551 -1.3 -3.3 Chemotaxis protein CheY compare
MPMX19_02618 -1.3 -1.7 Transcriptional regulatory protein BaeR compare
MPMX19_03194 -1.3 -1.4 hypothetical protein compare
MPMX19_03073 -1.3 -2.4 hypothetical protein compare
MPMX19_01918 -1.3 -1.8 tRNA-Ala compare
MPMX19_01149 -1.3 -4.1 Polyphosphate kinase compare
MPMX19_06150 -1.3 -3.9 Corrinoid adenosyltransferase compare
MPMX19_00976 -1.2 -2.2 ATP-dependent RNA helicase RhlE compare
MPMX19_01813 -1.2 -9.7 hypothetical protein compare
MPMX19_06275 -1.2 -7.6 Argininosuccinate lyase compare
MPMX19_06281 -1.2 -2.9 hypothetical protein compare
MPMX19_03948 -1.2 -1.3 tRNA-Ser compare
MPMX19_00126 -1.2 -2.5 hypothetical protein compare
MPMX19_06864 -1.2 -3.3 hypothetical protein compare
MPMX19_05725 -1.2 -2.7 hypothetical protein compare
MPMX19_02115 -1.2 -3.4 hypothetical protein compare
MPMX19_02151 -1.2 -9.4 Long-chain-fatty-acid--CoA ligase compare
MPMX19_04430 -1.2 -3.1 hypothetical protein compare
MPMX19_01854 -1.2 -5.9 hypothetical protein compare
MPMX19_04120 -1.2 -2.8 hypothetical protein compare
MPMX19_02504 -1.1 -3.7 hypothetical protein compare
MPMX19_03195 -1.1 -1.9 hypothetical protein compare
MPMX19_04636 -1.1 -2.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01545 -1.1 -2.1 Lon protease compare
MPMX19_02000 -1.1 -5.4 Aspartate-semialdehyde dehydrogenase 2 compare
MPMX19_01426 -1.1 -1.4 hypothetical protein compare
MPMX19_06141 -1.1 -2.0 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_05834 -1.1 -1.7 Hydrogen peroxide-inducible genes activator compare
MPMX19_01916 -1.1 -3.9 Putative acid--amine ligase YgiC compare
MPMX19_04726 -1.1 -2.8 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_01376 -1.1 -1.0 hypothetical protein compare
MPMX19_00362 -1.1 -2.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05850 -1.1 -1.9 hypothetical protein compare
MPMX19_01235 -1.1 -2.0 hypothetical protein compare
MPMX19_01883 -1.0 -2.0 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02668 -1.0 -5.6 RNA polymerase sigma-54 factor 2 compare
MPMX19_05751 -1.0 -6.1 hypothetical protein compare
MPMX19_02551 -1.0 -2.1 hypothetical protein compare
MPMX19_03165 -1.0 -2.1 hypothetical protein compare
MPMX19_02675 -1.0 -7.7 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_04115 -1.0 -1.3 Sensor histidine kinase RcsC compare
MPMX19_03453 -1.0 -2.7 Putative aliphatic sulfonates-binding protein compare
MPMX19_01015 -1.0 -1.1 Anthranilate phosphoribosyltransferase compare
MPMX19_02736 -1.0 -3.0 Tryptophan synthase beta chain compare
MPMX19_03198 -1.0 -2.7 hypothetical protein compare
MPMX19_01577 -1.0 -2.7 hypothetical protein compare
MPMX19_05271 -1.0 -1.5 hypothetical protein compare
MPMX19_01014 -0.9 -1.1 Indole-3-glycerol phosphate synthase compare
MPMX19_00712 -0.9 -3.4 hypothetical protein compare
MPMX19_02034 -0.9 -2.3 Peptidoglycan-associated lipoprotein compare
MPMX19_04881 -0.9 -5.2 Putrescine transport system permease protein PotH compare
MPMX19_02207 -0.9 -0.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_05387 -0.9 -1.5 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_05273 -0.9 -2.2 hypothetical protein compare
MPMX19_04584 -0.9 -2.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02544 -0.9 -2.7 hypothetical protein compare
MPMX19_05454 -0.9 -2.1 hypothetical protein compare
MPMX19_03655 -0.9 -1.3 hypothetical protein compare
MPMX19_04210 -0.9 -1.3 hypothetical protein compare
MPMX19_02348 -0.9 -1.5 hypothetical protein compare
MPMX19_05217 -0.9 -1.0 Flagellin compare
MPMX19_01194 -0.9 -7.0 Maltodextrin phosphorylase compare
MPMX19_03081 -0.9 -1.3 Protein FecR compare
MPMX19_04886 -0.9 -5.8 Gamma-glutamylputrescine synthetase PuuA compare
MPMX19_01630 -0.9 -2.3 Phosphoribosylamine--glycine ligase compare
MPMX19_01059 -0.9 -1.1 hypothetical protein compare
MPMX19_03871 -0.9 -1.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06917 -0.9 -2.7 HTH-type transcriptional regulator PgrR compare
MPMX19_03504 -0.9 -1.8 Sulfur carrier protein FdhD compare
MPMX19_03850 -0.9 -5.8 Glycogen operon protein GlgX compare
MPMX19_00635 -0.8 -5.2 5,10-methylenetetrahydrofolate reductase compare
MPMX19_06874 -0.8 -1.7 hypothetical protein compare
MPMX19_00904 -0.8 -4.2 DNA repair protein RadA compare
MPMX19_06353 -0.8 -1.3 hypothetical protein compare
MPMX19_06402 -0.8 -5.0 hypothetical protein compare
MPMX19_03295 -0.8 -1.5 HTH-type transcriptional regulator McbR compare
MPMX19_01818 -0.8 -3.7 hypothetical protein compare
MPMX19_00794 -0.8 -1.8 Transcriptional activator protein CopR compare
MPMX19_04696 -0.8 -2.0 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_00923 -0.8 -2.0 hypothetical protein compare
MPMX19_05246 -0.8 -4.0 Carbamoyl-phosphate synthase small chain compare
MPMX19_03976 -0.8 -2.7 hypothetical protein compare
MPMX19_06123 -0.8 -1.7 hypothetical protein compare
MPMX19_06404 -0.8 -2.3 hypothetical protein compare
MPMX19_02586 -0.8 -5.3 Phosphate import ATP-binding protein PstB compare
MPMX19_00319 -0.8 -0.8 hypothetical protein compare
MPMX19_02075 -0.8 -3.8 hypothetical protein compare
MPMX19_00718 -0.8 -1.5 hypothetical protein compare
MPMX19_03215 -0.8 -3.2 HTH-type transcriptional regulator PgrR compare
MPMX19_00433 -0.8 -2.6 Lysine/ornithine decarboxylase compare
MPMX19_06677 -0.8 -1.5 hypothetical protein compare
MPMX19_03987 -0.8 -2.8 hypothetical protein compare
MPMX19_02875 -0.8 -1.5 hypothetical protein compare
MPMX19_00472 -0.8 -1.5 Protein HesB, heterocyst compare
MPMX19_05747 -0.8 -1.9 Transcriptional regulatory protein DegU compare
MPMX19_04207 -0.8 -2.4 hypothetical protein compare
MPMX19_00607 -0.8 -4.5 3-isopropylmalate dehydrogenase compare
MPMX19_05519 -0.8 -4.3 LL-diaminopimelate aminotransferase compare
MPMX19_03944 -0.8 -3.2 hypothetical protein compare
MPMX19_01994 -0.8 -4.2 Bacterioferritin compare
MPMX19_03220 -0.8 -2.8 hypothetical protein compare
MPMX19_01443 -0.8 -2.9 Regulator of RpoS compare
MPMX19_00664 -0.7 -2.0 hypothetical protein compare
MPMX19_00062 -0.7 -2.0 Glycerophosphodiester phosphodiesterase, cytoplasmic compare
MPMX19_06800 -0.7 -2.4 Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase compare
MPMX19_01445 -0.7 -1.9 hypothetical protein compare
MPMX19_00606 -0.7 -3.7 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_01330 -0.7 -1.7 3-mercaptopyruvate sulfurtransferase compare
MPMX19_06632 -0.7 -5.9 Toxin RTX-I translocation ATP-binding protein compare
MPMX19_00150 -0.7 -2.7 hypothetical protein compare
MPMX19_06334 -0.7 -2.1 Arsenite oxidase subunit AioB compare
MPMX19_06337 -0.7 -2.3 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_00872 -0.7 -1.7 hypothetical protein compare
MPMX19_00148 -0.7 -1.2 hypothetical protein compare
MPMX19_01576 -0.7 -2.4 hypothetical protein compare
MPMX19_00572 -0.7 -2.1 Type-4 uracil-DNA glycosylase compare
MPMX19_03939 -0.7 -1.5 Enoyl-CoA-hydratase compare
MPMX19_01767 -0.7 -4.5 hypothetical protein compare
MPMX19_05624 -0.7 -1.2 hypothetical protein compare
MPMX19_05472 -0.7 -2.1 hypothetical protein compare
MPMX19_05455 -0.7 -2.7 hypothetical protein compare
MPMX19_02511 -0.7 -1.3 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_00447 -0.7 -1.6 hypothetical protein compare
MPMX19_05448 -0.7 -2.1 DNA-invertase hin compare
MPMX19_05521 -0.7 -2.1 Nitrogen regulatory protein P-II 2 compare
MPMX19_06811 -0.7 -2.9 Cytochrome c4 compare
MPMX19_05727 -0.7 -2.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_03230 -0.7 -2.7 hypothetical protein compare
MPMX19_00159 -0.7 -3.0 hypothetical protein compare
MPMX19_02677 -0.7 -2.6 hypothetical protein compare
MPMX19_06255 -0.7 -2.4 hypothetical protein compare
MPMX19_01377 -0.7 -1.6 Outer membrane protein assembly factor BamA compare
MPMX19_04673 -0.7 -1.5 Purine ribonucleoside efflux pump NepI compare
MPMX19_02778 -0.7 -1.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01373 -0.7 -2.7 hypothetical protein compare
MPMX19_06272 -0.7 -1.2 hypothetical protein compare
MPMX19_01423 -0.7 -1.6 hypothetical protein compare
MPMX19_06783 -0.7 -2.0 5-keto-D-gluconate 5-reductase compare
MPMX19_00663 -0.7 -1.8 hypothetical protein compare
MPMX19_00694 -0.7 -1.6 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_05982 -0.7 -1.6 hypothetical protein compare
MPMX19_00154 -0.7 -4.5 hypothetical protein compare
MPMX19_01085 -0.7 -2.2 hypothetical protein compare
MPMX19_02120 -0.7 -1.1 hypothetical protein compare
MPMX19_01652 -0.7 -1.6 hypothetical protein compare
MPMX19_04392 -0.7 -1.2 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_04219 -0.7 -2.1 hypothetical protein compare
MPMX19_05687 -0.7 -2.6 Chemotaxis protein CheW compare
MPMX19_01609 -0.7 -1.7 hypothetical protein compare
MPMX19_04208 -0.7 -1.8 flagellum biosynthesis repressor protein FlbT compare
MPMX19_00166 -0.7 -0.9 hypothetical protein compare
MPMX19_01692 -0.7 -3.6 Exopolyphosphatase compare
MPMX19_02536 -0.7 -1.8 hypothetical protein compare
MPMX19_05677 -0.6 -2.4 hypothetical protein compare
MPMX19_05586 -0.6 -1.2 hypothetical protein compare
MPMX19_06179 -0.6 -1.0 putative SURF1-like protein compare
MPMX19_03716 -0.6 -2.2 hypothetical protein compare
MPMX19_03257 -0.6 -1.8 Glycine betaine/proline betaine transport system ATP-binding protein ProV compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with_fulln experiments