Experiment set2S256 for Azospirillum sp. SherDot2

Compare to:

NF_with_fullN

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_05361 +2.0 11.1 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_01113 +1.9 8.5 Adaptive-response sensory-kinase SasA compare
MPMX19_00262 +1.9 5.3 Thiazole synthase compare
MPMX19_02392 +1.7 15.4 Aspartate/prephenate aminotransferase compare
MPMX19_04368 +1.7 14.8 Glutathione amide reductase compare
MPMX19_06050 +1.6 15.1 Phosphoenolpyruvate carboxylase compare
MPMX19_01914 +1.6 11.9 hypothetical protein compare
MPMX19_06044 +1.5 3.7 hypothetical protein compare
MPMX19_01101 +1.5 4.2 hypothetical protein compare
MPMX19_04218 +1.5 7.1 Protein phosphatase PrpC compare
MPMX19_01939 +1.5 7.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_04114 +1.4 6.1 hypothetical protein compare
MPMX19_01777 +1.4 9.0 2-aminoadipate transaminase compare
MPMX19_06746 +1.4 2.4 Chemotaxis protein CheW compare
MPMX19_02177 +1.4 6.1 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_03803 +1.4 3.6 hypothetical protein compare
MPMX19_06880 +1.4 2.0 Validamycin A dioxygenase compare
MPMX19_02674 +1.3 4.2 NADH:quinone reductase compare
MPMX19_00050 +1.3 5.4 Pyridoxal phosphate homeostasis protein compare
MPMX19_06276 +1.3 5.6 hypothetical protein compare
MPMX19_01276 +1.3 9.8 NAD(P) transhydrogenase subunit beta compare
MPMX19_01277 +1.3 7.8 hypothetical protein compare
MPMX19_00236 +1.2 5.0 HTH-type transcriptional regulator IscR compare
MPMX19_06723 +1.2 5.1 hypothetical protein compare
MPMX19_04257 +1.2 7.7 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase compare
MPMX19_02011 +1.2 4.8 RNA helicase CrhR compare
MPMX19_00475 +1.1 3.5 hypothetical protein compare
MPMX19_00647 +1.1 9.4 Bifunctional enzyme CysN/CysC compare
MPMX19_06547 +1.1 6.3 hypothetical protein compare
MPMX19_00530 +1.1 3.1 Orotate phosphoribosyltransferase compare
MPMX19_00835 +1.1 7.6 D-erythronate 4-phosphate dehydrogenase compare
MPMX19_01890 +1.1 7.3 Glyoxalase ElbB compare
MPMX19_03095 +1.1 2.3 hypothetical protein compare
MPMX19_00840 +1.1 4.2 Pyridoxine 5'-phosphate synthase compare
MPMX19_06517 +1.1 4.0 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_01053 +1.1 3.6 Dihydroorotase compare
MPMX19_06730 +1.1 9.3 hypothetical protein compare
MPMX19_01495 +1.1 1.6 hypothetical protein compare
MPMX19_03728 +1.1 1.7 hypothetical protein compare
MPMX19_02247 +1.0 8.8 Peptide methionine sulfoxide reductase MsrA compare
MPMX19_05224 +1.0 3.5 hypothetical protein compare
MPMX19_04910 +1.0 5.8 hypothetical protein compare
MPMX19_03934 +1.0 3.2 hypothetical protein compare
MPMX19_00651 +1.0 6.0 hypothetical protein compare
MPMX19_05412 +1.0 7.2 Glutathione import ATP-binding protein GsiA compare
MPMX19_02735 +1.0 2.8 Sensor histidine kinase RcsC compare
MPMX19_01278 +1.0 6.2 NAD(P) transhydrogenase subunit alpha part 1 compare
MPMX19_04112 +1.0 4.0 hypothetical protein compare
MPMX19_04898 +1.0 4.4 Transcriptional regulatory protein LnrK compare
MPMX19_02084 +1.0 2.2 hypothetical protein compare
MPMX19_01479 +0.9 4.7 hypothetical protein compare
MPMX19_01243 +0.9 2.1 hypothetical protein compare
MPMX19_03141 +0.9 2.0 hypothetical protein compare
MPMX19_05235 +0.9 3.2 HTH-type transcriptional regulator BetI compare
MPMX19_05357 +0.9 7.3 hypothetical protein compare
MPMX19_03538 +0.9 2.5 HTH-type transcriptional repressor NagR compare
MPMX19_00649 +0.9 3.9 Phosphoadenosine phosphosulfate reductase compare
MPMX19_05652 +0.9 2.8 hypothetical protein compare
MPMX19_04899 +0.9 6.8 3-methylmercaptopropionyl-CoA dehydrogenase compare
MPMX19_03760 +0.9 2.4 Ribose import binding protein RbsB compare
MPMX19_05818 +0.8 1.5 hypothetical protein compare
MPMX19_01394 +0.8 1.9 hypothetical protein compare
MPMX19_06545 +0.8 7.5 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_03822 +0.8 1.8 Sulfur carrier protein FdhD compare
MPMX19_05827 +0.8 7.1 hypothetical protein compare
MPMX19_00648 +0.8 6.0 Sulfate adenylyltransferase subunit 2 compare
MPMX19_00094 +0.8 2.4 hypothetical protein compare
MPMX19_04904 +0.8 6.9 Alpha-2-macroglobulin compare
MPMX19_06984 +0.8 2.5 Mesaconyl-C(4)-CoA hydratase compare
MPMX19_00868 +0.8 7.4 Sensor kinase CckA compare
MPMX19_00048 +0.8 3.7 hypothetical protein compare
MPMX19_06777 +0.8 1.7 hypothetical protein compare
MPMX19_00650 +0.8 5.2 Siroheme synthase compare
MPMX19_05800 +0.8 5.6 hypothetical protein compare
MPMX19_03722 +0.8 1.5 hypothetical protein compare
MPMX19_05119 +0.8 6.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_05350 +0.8 5.3 hypothetical protein compare
MPMX19_05581 +0.8 1.0 hypothetical protein compare
MPMX19_06519 +0.8 0.9 HTH-type transcriptional repressor NagR compare
MPMX19_02806 +0.8 2.4 HTH-type transcriptional regulator DmlR compare
MPMX19_04094 +0.8 5.9 Flagellar M-ring protein compare
MPMX19_00025 +0.8 1.2 hypothetical protein compare
MPMX19_04985 +0.8 1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_03734 +0.8 1.4 RutC family protein YjgH compare
MPMX19_03472 +0.8 1.8 Fatty acid metabolism regulator protein compare
MPMX19_02779 +0.8 2.0 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00866 +0.8 4.6 Flagellar biosynthetic protein FliR compare
MPMX19_02116 +0.8 1.6 Cold shock protein CspA compare
MPMX19_00864 +0.8 3.4 Flagellar hook-basal body complex protein FliE compare
MPMX19_03618 +0.8 3.1 hypothetical protein compare
MPMX19_04093 +0.8 2.4 hypothetical protein compare
MPMX19_05248 +0.8 4.3 hypothetical protein compare
MPMX19_00933 +0.7 1.9 hypothetical protein compare
MPMX19_02524 +0.7 5.2 tRNA pseudouridine synthase B compare
MPMX19_04449 +0.7 1.7 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_04145 +0.7 1.4 hypothetical protein compare
MPMX19_01480 +0.7 3.3 hypothetical protein compare
MPMX19_02580 +0.7 2.1 Acetyltransferase compare
MPMX19_04732 +0.7 2.8 hypothetical protein compare
MPMX19_05411 +0.7 5.7 Periplasmic alpha-galactoside-binding protein compare
MPMX19_05314 +0.7 1.9 hypothetical protein compare
MPMX19_05430 +0.7 1.8 HTH-type transcriptional regulator DmlR compare
MPMX19_01497 +0.7 1.9 hypothetical protein compare
MPMX19_00011 +0.7 4.0 Adaptive-response sensory-kinase SasA compare
MPMX19_00854 +0.7 6.4 hypothetical protein compare
MPMX19_00414 +0.7 2.2 Pyruvate dehydrogenase complex repressor compare
MPMX19_04205 +0.7 2.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01531 +0.7 5.3 hypothetical protein compare
MPMX19_04495 +0.7 2.9 hypothetical protein compare
MPMX19_06933 +0.7 1.5 Manganese transport system ATP-binding protein MntB compare
MPMX19_04913 +0.7 1.1 hypothetical protein compare
MPMX19_03771 +0.7 2.4 hypothetical protein compare
MPMX19_03640 +0.7 3.1 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase compare
MPMX19_05068 +0.7 3.1 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_02002 +0.7 2.4 hypothetical protein compare
MPMX19_06202 +0.7 1.1 hypothetical protein compare
MPMX19_02123 +0.7 2.4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_01648 +0.7 2.2 hypothetical protein compare
MPMX19_01719 +0.7 1.8 Putative fluoride ion transporter CrcB compare
MPMX19_00286 +0.7 3.5 hypothetical protein compare
MPMX19_00600 +0.7 3.1 hypothetical protein compare
MPMX19_04092 +0.7 4.4 Flagellar motor switch protein FliN compare
MPMX19_06230 +0.7 2.1 hypothetical protein compare
MPMX19_04638 +0.7 1.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01483 +0.7 4.6 Flagellar basal-body rod protein FlgG compare
MPMX19_02579 +0.7 1.7 hypothetical protein compare
MPMX19_00010 +0.7 2.7 Transcriptional regulatory protein OmpR compare
MPMX19_06169 +0.7 2.9 hypothetical protein compare
MPMX19_00912 +0.7 5.3 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_05690 +0.7 4.1 Protein phosphotransferase ChpT compare
MPMX19_00311 +0.7 5.8 hypothetical protein compare
MPMX19_03958 +0.7 4.1 Disulfide-bond oxidoreductase YfcG compare
MPMX19_04900 +0.7 5.3 putative 3-hydroxyacyl-CoA dehydrogenase compare
MPMX19_00482 +0.7 2.7 Sensor histidine kinase RcsC compare
MPMX19_04609 +0.7 3.2 Putative short-chain type dehydrogenase/reductase compare
MPMX19_01047 +0.7 2.3 Transcriptional regulatory protein ros compare
MPMX19_06601 +0.7 2.1 hypothetical protein compare
MPMX19_04347 +0.7 2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_00862 +0.7 4.4 hypothetical protein compare
MPMX19_00351 +0.7 4.1 hypothetical protein compare
MPMX19_00852 +0.6 1.4 hypothetical protein compare
MPMX19_01872 +0.6 3.7 hypothetical protein compare
MPMX19_04822 +0.6 2.7 Ornithine lipid N-methyltransferase compare
MPMX19_01403 +0.6 2.8 hypothetical protein compare
MPMX19_01481 +0.6 5.3 Flagellar motor switch protein FliM compare
MPMX19_00860 +0.6 1.2 hypothetical protein compare
MPMX19_06351 +0.6 1.8 Arsenate reductase compare
MPMX19_01610 +0.6 1.2 ATP-dependent DNA helicase PcrA compare
MPMX19_00652 +0.6 5.6 Sulfite reductase [ferredoxin] compare
MPMX19_04258 +0.6 1.7 hypothetical protein compare
MPMX19_00088 +0.6 2.8 HTH-type transcriptional regulator HdfR compare
MPMX19_04731 +0.6 2.3 hypothetical protein compare
MPMX19_05190 +0.6 2.6 putative malonic semialdehyde reductase RutE compare
MPMX19_06156 +0.6 1.9 hypothetical protein compare
MPMX19_03001 +0.6 2.1 Ribulokinase compare
MPMX19_06470 +0.6 1.9 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_03584 +0.6 1.9 Adaptive-response sensory-kinase SasA compare
MPMX19_04199 +0.6 4.0 Pseudaminic acid synthase compare
MPMX19_04419 +0.6 4.8 Periplasmic dipeptide transport protein compare
MPMX19_01897 +0.6 5.7 hypothetical protein compare
MPMX19_03213 +0.6 2.1 hypothetical protein compare
MPMX19_00260 +0.6 1.6 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01499 +0.6 2.0 hypothetical protein compare
MPMX19_05528 +0.6 2.7 hypothetical protein compare
MPMX19_03352 +0.6 2.9 hypothetical protein compare
MPMX19_04421 +0.6 3.8 Chitooligosaccharide deacetylase ChbG compare
MPMX19_02058 +0.6 1.6 hypothetical protein compare
MPMX19_05531 +0.6 3.1 Serine acetyltransferase compare
MPMX19_02055 +0.6 2.0 Hypoxic response protein 1 compare
MPMX19_00858 +0.6 2.9 Flagellar biosynthetic protein FliP compare
MPMX19_04838 +0.6 2.4 Heme oxygenase (staphylobilin-producing) compare
MPMX19_06456 +0.6 1.2 hypothetical protein compare
MPMX19_01486 +0.6 3.5 Flagellar L-ring protein compare
MPMX19_01882 +0.6 3.5 Ribonuclease BN compare
MPMX19_04911 +0.6 2.7 hypothetical protein compare
MPMX19_02988 +0.6 2.2 hypothetical protein compare
MPMX19_03741 +0.6 1.4 hypothetical protein compare
MPMX19_00544 +0.6 1.0 hypothetical protein compare
MPMX19_02128 +0.6 3.0 Lipopolysaccharide assembly protein B compare
MPMX19_02227 +0.6 5.0 Pyruvate, phosphate dikinase compare
MPMX19_01491 +0.6 1.2 hypothetical protein compare
MPMX19_05144 +0.6 1.0 hypothetical protein compare
MPMX19_00100 +0.6 2.5 hypothetical protein compare
MPMX19_01339 +0.6 4.4 Cystathionine beta-lyase MetC compare
MPMX19_04952 +0.6 1.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05085 +0.6 2.5 hypothetical protein compare
MPMX19_02518 +0.6 2.5 tRNA (guanine-N(7)-)-methyltransferase compare
MPMX19_06883 +0.6 2.0 Choline trimethylamine-lyase activating enzyme compare
MPMX19_01484 +0.6 2.8 Flagellar basal-body rod protein FlgG compare
MPMX19_04089 +0.6 4.9 Flagellar biosynthesis protein FlhA compare
MPMX19_02486 +0.6 2.1 Chemotaxis protein CheY compare
MPMX19_06877 +0.6 1.9 hypothetical protein compare
MPMX19_05808 +0.6 2.8 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA compare
MPMX19_00779 +0.6 2.8 hypothetical protein compare
MPMX19_03500 +0.6 2.1 Sulfur carrier protein FdhD compare
MPMX19_05393 +0.6 2.0 hypothetical protein compare
MPMX19_03054 +0.6 2.5 putative ABC transporter permease protein NosY compare
MPMX19_00680 +0.6 1.3 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_03000 +0.6 2.3 Galactitol 2-dehydrogenase compare
MPMX19_06734 +0.6 5.0 Alginate biosynthesis protein AlgA compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with_fulln experiments