Experiment set2S255 for Azospirillum sp. SherDot2

Compare to:

NF_with_fullN

200 most important genes:

  gene name fitness t score description  
MPMX19_02618 -2.8 -2.6 Transcriptional regulatory protein BaeR compare
MPMX19_02629 -2.7 -18.1 hypothetical protein compare
MPMX19_01139 -2.6 -9.3 hypothetical protein compare
MPMX19_02543 -2.5 -3.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00128 -2.4 -17.0 hypothetical protein compare
MPMX19_05954 -2.4 -6.6 hypothetical protein compare
MPMX19_01402 -2.4 -11.8 hypothetical protein compare
MPMX19_04124 -2.2 -6.0 hypothetical protein compare
MPMX19_01142 -2.2 -6.4 hypothetical protein compare
MPMX19_01141 -2.2 -5.8 hypothetical protein compare
MPMX19_02267 -2.2 -3.4 hypothetical protein compare
MPMX19_01249 -2.1 -3.8 Periplasmic serine endoprotease DegP compare
MPMX19_01140 -2.0 -10.4 hypothetical protein compare
MPMX19_03906 -2.0 -10.7 Pca regulon regulatory protein compare
MPMX19_06001 -1.9 -3.9 hypothetical protein compare
MPMX19_06700 -1.9 -2.5 Copper-sensing transcriptional repressor RicR compare
MPMX19_04431 -1.9 -11.7 hypothetical protein compare
MPMX19_05727 -1.9 -6.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_02504 -1.8 -4.9 hypothetical protein compare
MPMX19_01376 -1.8 -1.2 hypothetical protein compare
MPMX19_02135 -1.8 -6.7 Phage shock protein B compare
MPMX19_05725 -1.7 -4.0 hypothetical protein compare
MPMX19_02138 -1.7 -10.0 Psp operon transcriptional activator compare
MPMX19_01149 -1.6 -5.2 Polyphosphate kinase compare
MPMX19_01766 -1.6 -7.6 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_02981 -1.6 -5.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06546 -1.6 -2.4 hypothetical protein compare
MPMX19_00131 -1.6 -2.7 hypothetical protein compare
MPMX19_02320 -1.6 -1.9 HTH-type transcriptional regulator GltR compare
MPMX19_00152 -1.5 -2.2 hypothetical protein compare
MPMX19_01401 -1.5 -2.6 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_04392 -1.5 -2.5 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_04430 -1.5 -4.0 hypothetical protein compare
MPMX19_02134 -1.5 -5.6 Phage shock protein C compare
MPMX19_00635 -1.4 -8.2 5,10-methylenetetrahydrofolate reductase compare
MPMX19_00335 -1.4 -1.8 Magnesium transport protein CorA compare
MPMX19_04391 -1.4 -5.2 Homoserine O-acetyltransferase compare
MPMX19_02736 -1.3 -3.4 Tryptophan synthase beta chain compare
MPMX19_01813 -1.3 -10.6 hypothetical protein compare
MPMX19_02137 -1.3 -4.7 hypothetical protein compare
MPMX19_06123 -1.3 -2.6 hypothetical protein compare
MPMX19_04079 -1.3 -1.2 hypothetical protein compare
MPMX19_04551 -1.3 -2.2 HTH-type transcriptional repressor RspR compare
MPMX19_06277 -1.3 -7.5 hypothetical protein compare
MPMX19_06150 -1.3 -4.1 Corrinoid adenosyltransferase compare
MPMX19_06917 -1.2 -3.4 HTH-type transcriptional regulator PgrR compare
MPMX19_02657 -1.2 -10.1 Glutamate synthase [NADPH] large chain compare
MPMX19_02268 -1.2 -3.9 hypothetical protein compare
MPMX19_06275 -1.2 -7.7 Argininosuccinate lyase compare
MPMX19_03612 -1.2 -3.5 hypothetical protein compare
MPMX19_03439 -1.2 -1.9 hypothetical protein compare
MPMX19_01998 -1.2 -5.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_00710 -1.2 -8.6 hypothetical protein compare
MPMX19_00606 -1.1 -5.6 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_01364 -1.1 -8.1 O-succinylhomoserine sulfhydrylase compare
MPMX19_05044 -1.1 -1.7 hypothetical protein compare
MPMX19_01630 -1.1 -2.7 Phosphoribosylamine--glycine ligase compare
MPMX19_00607 -1.1 -6.3 3-isopropylmalate dehydrogenase compare
MPMX19_06808 -1.1 -2.2 HTH-type transcriptional regulator DmlR compare
MPMX19_01854 -1.1 -5.9 hypothetical protein compare
MPMX19_05454 -1.1 -2.6 hypothetical protein compare
MPMX19_05677 -1.1 -3.9 hypothetical protein compare
MPMX19_03734 -1.1 -1.3 RutC family protein YjgH compare
MPMX19_06090 -1.1 -1.4 Pyruvate dehydrogenase complex repressor compare
MPMX19_02207 -1.0 -0.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02136 -1.0 -1.7 Phage shock protein A compare
MPMX19_02658 -1.0 -7.3 Glutamate synthase [NADPH] small chain compare
MPMX19_05246 -1.0 -5.4 Carbamoyl-phosphate synthase small chain compare
MPMX19_01015 -1.0 -1.3 Anthranilate phosphoribosyltransferase compare
MPMX19_00142 -1.0 -1.3 hypothetical protein compare
MPMX19_00126 -1.0 -1.5 hypothetical protein compare
MPMX19_02902 -1.0 -2.3 hypothetical protein compare
MPMX19_02700 -1.0 -2.8 hypothetical protein compare
MPMX19_01822 -1.0 -4.9 2-isopropylmalate synthase compare
MPMX19_05656 -1.0 -2.0 HTH-type transcriptional activator RhaR compare
MPMX19_02162 -1.0 -6.8 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_01377 -1.0 -1.9 Outer membrane protein assembly factor BamA compare
MPMX19_03609 -1.0 -2.1 HTH-type transcriptional repressor NagR compare
MPMX19_00005 -0.9 -1.8 hypothetical protein compare
MPMX19_06966 -0.9 -2.5 hypothetical protein compare
MPMX19_05472 -0.9 -2.5 hypothetical protein compare
MPMX19_05449 -0.9 -2.6 hypothetical protein compare
MPMX19_05016 -0.9 -1.0 Sensor histidine kinase RcsC compare
MPMX19_01883 -0.9 -2.2 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_01395 -0.9 -1.4 hypothetical protein compare
MPMX19_04886 -0.9 -6.2 Gamma-glutamylputrescine synthetase PuuA compare
MPMX19_00849 -0.9 -2.2 hypothetical protein compare
MPMX19_05459 -0.9 -1.5 hypothetical protein compare
MPMX19_03063 -0.9 -2.4 hypothetical protein compare
MPMX19_00268 -0.9 -1.9 Transcriptional regulatory protein OmpR compare
MPMX19_01059 -0.9 -1.3 hypothetical protein compare
MPMX19_02979 -0.9 -2.7 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_02875 -0.9 -2.5 hypothetical protein compare
MPMX19_06373 -0.9 -2.1 Lipoprotein signal peptidase compare
MPMX19_02675 -0.9 -6.9 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_05989 -0.9 -2.7 HTH-type transcriptional regulator HdfR compare
MPMX19_06320 -0.9 -3.0 hypothetical protein compare
MPMX19_06456 -0.9 -1.2 hypothetical protein compare
MPMX19_04759 -0.9 -2.6 HTH-type transcriptional regulator LutR compare
MPMX19_00712 -0.8 -3.3 hypothetical protein compare
MPMX19_01884 -0.8 -0.9 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_02085 -0.8 -2.6 hypothetical protein compare
MPMX19_05387 -0.8 -1.4 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_02151 -0.8 -7.0 Long-chain-fatty-acid--CoA ligase compare
MPMX19_03850 -0.8 -5.8 Glycogen operon protein GlgX compare
MPMX19_05127 -0.8 -2.5 hypothetical protein compare
MPMX19_01978 -0.8 -1.3 hypothetical protein compare
MPMX19_04210 -0.8 -1.4 hypothetical protein compare
MPMX19_03613 -0.8 -2.6 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_04449 -0.8 -1.0 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_03557 -0.8 -2.6 HTH-type transcriptional regulator CynR compare
MPMX19_00181 -0.8 -2.7 hypothetical protein compare
MPMX19_03425 -0.8 -1.7 hypothetical protein compare
MPMX19_05751 -0.8 -5.0 hypothetical protein compare
MPMX19_04115 -0.8 -0.9 Sensor histidine kinase RcsC compare
MPMX19_06329 -0.8 -2.7 hypothetical protein compare
MPMX19_00795 -0.8 -2.6 Adaptive-response sensory-kinase SasA compare
MPMX19_06144 -0.7 -2.1 hypothetical protein compare
MPMX19_00134 -0.7 -2.4 hypothetical protein compare
MPMX19_00696 -0.7 -2.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_03019 -0.7 -2.4 hypothetical protein compare
MPMX19_02980 -0.7 -1.1 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_01692 -0.7 -4.2 Exopolyphosphatase compare
MPMX19_05575 -0.7 -2.0 hypothetical protein compare
MPMX19_03420 -0.7 -1.6 hypothetical protein compare
MPMX19_03369 -0.7 -1.6 hypothetical protein compare
MPMX19_04883 -0.7 -4.4 Spermidine-binding periplasmic protein SpuE compare
MPMX19_02579 -0.7 -1.5 hypothetical protein compare
MPMX19_01767 -0.7 -4.7 hypothetical protein compare
MPMX19_06765 -0.7 -1.7 Hydrogen peroxide-inducible genes activator compare
MPMX19_04874 -0.7 -3.3 hypothetical protein compare
MPMX19_02115 -0.7 -2.3 hypothetical protein compare
MPMX19_02687 -0.7 -3.6 hypothetical protein compare
MPMX19_03123 -0.7 -1.4 Citrate lyase acyl carrier protein compare
MPMX19_04881 -0.7 -4.5 Putrescine transport system permease protein PotH compare
MPMX19_06437 -0.7 -1.7 DNA-invertase hin compare
MPMX19_04952 -0.7 -1.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00157 -0.7 -5.5 hypothetical protein compare
MPMX19_06985 -0.7 -1.4 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_00794 -0.7 -1.6 Transcriptional activator protein CopR compare
MPMX19_03406 -0.7 -2.2 HTH-type transcriptional regulator HdfR compare
MPMX19_05143 -0.7 -1.1 hypothetical protein compare
MPMX19_02664 -0.7 -1.6 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_04948 -0.7 -1.3 HTH-type transcriptional regulator GltR compare
MPMX19_00046 -0.7 -1.0 hypothetical protein compare
MPMX19_02708 -0.7 -5.8 ATP-dependent DNA helicase Rep compare
MPMX19_06656 -0.7 -4.8 Dodecaprenyl-phosphate galacturonate synthase compare
MPMX19_01283 -0.7 -1.9 hypothetical protein compare
MPMX19_02251 -0.7 -1.4 hypothetical protein compare
MPMX19_05440 -0.7 -2.5 hypothetical protein compare
MPMX19_02684 -0.7 -3.7 hypothetical protein compare
MPMX19_02862 -0.7 -2.6 hypothetical protein compare
MPMX19_03819 -0.7 -2.6 NADP-reducing hydrogenase subunit HndA compare
MPMX19_03252 -0.7 -2.3 hypothetical protein compare
MPMX19_02911 -0.7 -1.6 hypothetical protein compare
MPMX19_02737 -0.7 -1.0 Tryptophan synthase alpha chain compare
MPMX19_02806 -0.7 -1.5 HTH-type transcriptional regulator DmlR compare
MPMX19_02927 -0.7 -2.4 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_00904 -0.7 -3.5 DNA repair protein RadA compare
MPMX19_06632 -0.7 -5.4 Toxin RTX-I translocation ATP-binding protein compare
MPMX19_02586 -0.7 -4.6 Phosphate import ATP-binding protein PstB compare
MPMX19_03215 -0.6 -2.9 HTH-type transcriptional regulator PgrR compare
MPMX19_06383 -0.6 -2.1 hypothetical protein compare
MPMX19_03724 -0.6 -1.2 hypothetical protein compare
MPMX19_05215 -0.6 -1.7 hypothetical protein compare
MPMX19_06874 -0.6 -1.6 hypothetical protein compare
MPMX19_00674 -0.6 -2.1 hypothetical protein compare
MPMX19_00266 -0.6 -1.1 hypothetical protein compare
MPMX19_00089 -0.6 -1.5 hypothetical protein compare
MPMX19_04390 -0.6 -1.1 hypothetical protein compare
MPMX19_00150 -0.6 -3.1 hypothetical protein compare
MPMX19_06004 -0.6 -1.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01297 -0.6 -1.4 hypothetical protein compare
MPMX19_01559 -0.6 -2.3 hypothetical protein compare
MPMX19_03984 -0.6 -2.6 hypothetical protein compare
MPMX19_03586 -0.6 -1.3 HTH-type transcriptional repressor ComR compare
MPMX19_01194 -0.6 -5.2 Maltodextrin phosphorylase compare
MPMX19_01415 -0.6 -1.4 hypothetical protein compare
MPMX19_00540 -0.6 -3.2 Tungstate-binding protein TupA compare
MPMX19_04668 -0.6 -1.6 HTH-type transcriptional regulator DmlR compare
MPMX19_03452 -0.6 -1.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_01577 -0.6 -2.0 hypothetical protein compare
MPMX19_01075 -0.6 -1.3 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_06337 -0.6 -2.1 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_01818 -0.6 -3.1 hypothetical protein compare
MPMX19_00503 -0.6 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_05061 -0.6 -3.0 hypothetical protein compare
MPMX19_03196 -0.6 -1.9 hypothetical protein compare
MPMX19_01314 -0.6 -2.7 hypothetical protein compare
MPMX19_02584 -0.6 -4.6 hypothetical protein compare
MPMX19_06926 -0.6 -2.2 hypothetical protein compare
MPMX19_02858 -0.6 -2.3 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase compare
MPMX19_00790 -0.6 -1.3 hypothetical protein compare
MPMX19_02779 -0.6 -1.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00158 -0.6 -3.3 hypothetical protein compare
MPMX19_02773 -0.6 -3.4 Gamma-glutamylputrescine oxidoreductase compare
MPMX19_03529 -0.6 -2.1 2,3-diketo-L-gulonate-binding periplasmic protein YiaO compare
MPMX19_06863 -0.6 -2.0 hypothetical protein compare
MPMX19_03504 -0.6 -1.5 Sulfur carrier protein FdhD compare
MPMX19_00186 -0.6 -1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with_fulln experiments