Experiment set2S255 for Azospirillum sp. SherDot2

Compare to:

NF_with_fullN

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_05361 +1.8 10.1 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_04114 +1.7 8.1 hypothetical protein compare
MPMX19_04218 +1.7 8.7 Protein phosphatase PrpC compare
MPMX19_00680 +1.6 4.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_01113 +1.5 8.5 Adaptive-response sensory-kinase SasA compare
MPMX19_04112 +1.5 7.5 hypothetical protein compare
MPMX19_02392 +1.4 13.0 Aspartate/prephenate aminotransferase compare
MPMX19_01914 +1.3 10.8 hypothetical protein compare
MPMX19_00236 +1.2 5.3 HTH-type transcriptional regulator IscR compare
MPMX19_03095 +1.2 2.5 hypothetical protein compare
MPMX19_06276 +1.2 6.1 hypothetical protein compare
MPMX19_01426 +1.2 1.9 hypothetical protein compare
MPMX19_02116 +1.2 2.7 Cold shock protein CspA compare
MPMX19_02674 +1.1 4.2 NADH:quinone reductase compare
MPMX19_04910 +1.1 7.1 hypothetical protein compare
MPMX19_04368 +1.1 9.8 Glutathione amide reductase compare
MPMX19_01483 +1.1 8.1 Flagellar basal-body rod protein FlgG compare
MPMX19_05442 +1.1 4.0 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_05068 +1.0 5.3 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_03803 +1.0 2.7 hypothetical protein compare
MPMX19_03276 +1.0 2.2 hypothetical protein compare
MPMX19_06723 +1.0 4.6 hypothetical protein compare
MPMX19_05358 +1.0 2.0 hypothetical protein compare
MPMX19_02011 +1.0 4.4 RNA helicase CrhR compare
MPMX19_05818 +1.0 1.4 hypothetical protein compare
MPMX19_00600 +1.0 4.5 hypothetical protein compare
MPMX19_04276 +1.0 1.7 hypothetical protein compare
MPMX19_04835 +1.0 3.2 hypothetical protein compare
MPMX19_01479 +1.0 5.5 hypothetical protein compare
MPMX19_04257 +1.0 6.5 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase compare
MPMX19_03741 +1.0 2.6 hypothetical protein compare
MPMX19_04094 +1.0 7.6 Flagellar M-ring protein compare
MPMX19_03085 +1.0 2.6 Hydrogen peroxide-inducible genes activator compare
MPMX19_00262 +1.0 2.7 Thiazole synthase compare
MPMX19_00048 +0.9 5.1 hypothetical protein compare
MPMX19_03784 +0.9 2.3 hypothetical protein compare
MPMX19_01794 +0.9 3.3 Putative cysteine protease YraA compare
MPMX19_04092 +0.9 6.4 Flagellar motor switch protein FliN compare
MPMX19_00858 +0.9 4.5 Flagellar biosynthetic protein FliP compare
MPMX19_05357 +0.9 7.5 hypothetical protein compare
MPMX19_06179 +0.9 1.6 putative SURF1-like protein compare
MPMX19_06547 +0.9 5.1 hypothetical protein compare
MPMX19_03694 +0.9 1.4 hypothetical protein compare
MPMX19_06093 +0.9 3.7 Lactate utilization protein A compare
MPMX19_00860 +0.9 2.5 hypothetical protein compare
MPMX19_01497 +0.9 3.2 hypothetical protein compare
MPMX19_02234 +0.9 3.3 hypothetical protein compare
MPMX19_01484 +0.9 4.6 Flagellar basal-body rod protein FlgG compare
MPMX19_00311 +0.9 7.8 hypothetical protein compare
MPMX19_02300 +0.9 4.8 Transcription elongation factor GreA compare
MPMX19_01276 +0.9 6.7 NAD(P) transhydrogenase subunit beta compare
MPMX19_04010 +0.9 2.1 Isoaspartyl peptidase compare
MPMX19_06880 +0.9 1.6 Validamycin A dioxygenase compare
MPMX19_06545 +0.9 7.8 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_00050 +0.9 3.2 Pyridoxal phosphate homeostasis protein compare
MPMX19_00866 +0.8 5.5 Flagellar biosynthetic protein FliR compare
MPMX19_04000 +0.8 3.9 Flagellar motor switch protein FliG compare
MPMX19_05652 +0.8 2.8 hypothetical protein compare
MPMX19_00862 +0.8 6.0 hypothetical protein compare
MPMX19_02402 +0.8 1.7 hypothetical protein compare
MPMX19_00651 +0.8 5.3 hypothetical protein compare
MPMX19_00854 +0.8 7.6 hypothetical protein compare
MPMX19_00582 +0.8 4.5 hypothetical protein compare
MPMX19_04087 +0.8 3.6 Flagellum site-determining protein YlxH compare
MPMX19_05918 +0.8 3.1 Flagellar biosynthetic protein FliP compare
MPMX19_00263 +0.8 2.2 hypothetical protein compare
MPMX19_04258 +0.8 3.0 hypothetical protein compare
MPMX19_02177 +0.8 3.9 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_00478 +0.8 1.8 putative protein RP812 compare
MPMX19_04899 +0.8 6.6 3-methylmercaptopropionyl-CoA dehydrogenase compare
MPMX19_03340 +0.8 2.4 hypothetical protein compare
MPMX19_02524 +0.8 5.9 tRNA pseudouridine synthase B compare
MPMX19_06730 +0.8 7.0 hypothetical protein compare
MPMX19_00237 +0.8 3.1 Cysteine synthase compare
MPMX19_01469 +0.8 5.7 putative metal-dependent hydrolase YcfH compare
MPMX19_05800 +0.8 5.7 hypothetical protein compare
MPMX19_03141 +0.8 2.3 hypothetical protein compare
MPMX19_00840 +0.8 3.4 Pyridoxine 5'-phosphate synthase compare
MPMX19_05445 +0.8 2.4 tRNA-Glu compare
MPMX19_04958 +0.8 2.2 Methyl-accepting chemotaxis protein compare
MPMX19_05998 +0.8 4.5 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase compare
MPMX19_00835 +0.8 5.4 D-erythronate 4-phosphate dehydrogenase compare
MPMX19_02247 +0.8 6.5 Peptide methionine sulfoxide reductase MsrA compare
MPMX19_01480 +0.8 3.8 hypothetical protein compare
MPMX19_05235 +0.8 2.8 HTH-type transcriptional regulator BetI compare
MPMX19_06470 +0.8 2.6 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_02514 +0.8 1.9 hypothetical protein compare
MPMX19_06050 +0.8 7.0 Phosphoenolpyruvate carboxylase compare
MPMX19_03699 +0.8 2.2 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_01481 +0.8 6.5 Flagellar motor switch protein FliM compare
MPMX19_01277 +0.8 4.4 hypothetical protein compare
MPMX19_01499 +0.7 2.6 hypothetical protein compare
MPMX19_03924 +0.7 2.4 hypothetical protein compare
MPMX19_01175 +0.7 6.6 Homospermidine synthase compare
MPMX19_05690 +0.7 4.3 Protein phosphotransferase ChpT compare
MPMX19_01890 +0.7 5.0 Glyoxalase ElbB compare
MPMX19_00647 +0.7 6.0 Bifunctional enzyme CysN/CysC compare
MPMX19_05531 +0.7 4.0 Serine acetyltransferase compare
MPMX19_05350 +0.7 4.9 hypothetical protein compare
MPMX19_00031 +0.7 2.1 hypothetical protein compare
MPMX19_06517 +0.7 2.9 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_00304 +0.7 2.7 Phosphatidylcholine synthase compare
MPMX19_00863 +0.7 5.0 Flagellar basal-body rod protein FlgC compare
MPMX19_04204 +0.7 4.6 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_04093 +0.7 2.7 hypothetical protein compare
MPMX19_06266 +0.7 1.0 hypothetical protein compare
MPMX19_02518 +0.7 3.6 tRNA (guanine-N(7)-)-methyltransferase compare
MPMX19_06577 +0.7 5.6 hypothetical protein compare
MPMX19_01648 +0.7 2.5 hypothetical protein compare
MPMX19_04622 +0.7 4.9 hypothetical protein compare
MPMX19_04199 +0.7 4.6 Pseudaminic acid synthase compare
MPMX19_05827 +0.7 5.9 hypothetical protein compare
MPMX19_00695 +0.7 1.8 putative transcriptional regulatory protein compare
MPMX19_06321 +0.7 2.7 hypothetical protein compare
MPMX19_04223 +0.7 5.6 hypothetical protein compare
MPMX19_00260 +0.7 1.8 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00010 +0.7 3.3 Transcriptional regulatory protein OmpR compare
MPMX19_05065 +0.7 2.5 Farnesyl diphosphate synthase compare
MPMX19_01545 +0.7 1.7 Lon protease compare
MPMX19_03096 +0.7 1.3 hypothetical protein compare
MPMX19_02484 +0.7 1.9 Heat-inducible transcription repressor HrcA compare
MPMX19_01159 +0.7 5.7 Presqualene diphosphate synthase compare
MPMX19_01918 +0.7 1.5 tRNA-Ala compare
MPMX19_05332 +0.7 3.6 HTH-type transcriptional regulator GntR compare
MPMX19_00574 +0.7 2.8 hypothetical protein compare
MPMX19_04904 +0.7 5.6 Alpha-2-macroglobulin compare
MPMX19_02160 +0.7 3.8 hypothetical protein compare
MPMX19_04900 +0.7 5.4 putative 3-hydroxyacyl-CoA dehydrogenase compare
MPMX19_00011 +0.7 3.8 Adaptive-response sensory-kinase SasA compare
MPMX19_00912 +0.7 5.1 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_00025 +0.7 1.4 hypothetical protein compare
MPMX19_06581 +0.6 4.9 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_02378 +0.6 1.8 hypothetical protein compare
MPMX19_01201 +0.6 2.8 hypothetical protein compare
MPMX19_06544 +0.6 5.4 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_02988 +0.6 2.7 hypothetical protein compare
MPMX19_02109 +0.6 2.7 hypothetical protein compare
MPMX19_03806 +0.6 2.1 hypothetical protein compare
MPMX19_06278 +0.6 4.2 S-sulfocysteine synthase compare
MPMX19_00016 +0.6 5.3 Adenosine deaminase compare
MPMX19_06904 +0.6 2.1 putative tautomerase compare
MPMX19_03795 +0.6 3.0 hypothetical protein compare
MPMX19_01882 +0.6 3.6 Ribonuclease BN compare
MPMX19_01939 +0.6 2.8 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_02303 +0.6 2.0 hypothetical protein compare
MPMX19_04513 +0.6 2.6 Adaptive-response sensory-kinase SasA compare
MPMX19_00699 +0.6 4.2 Acyl-CoA thioesterase YbgC compare
MPMX19_05364 +0.6 2.9 Acetate CoA-transferase subunit beta compare
MPMX19_04347 +0.6 2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_04563 +0.6 1.4 hypothetical protein compare
MPMX19_02202 +0.6 1.3 hypothetical protein compare
MPMX19_03760 +0.6 1.7 Ribose import binding protein RbsB compare
MPMX19_00868 +0.6 5.6 Sensor kinase CckA compare
MPMX19_01243 +0.6 1.4 hypothetical protein compare
MPMX19_01495 +0.6 1.2 hypothetical protein compare
MPMX19_06655 +0.6 4.8 hypothetical protein compare
MPMX19_04569 +0.6 2.6 Anti-sigma-F factor NrsF compare
MPMX19_02424 +0.6 3.3 hypothetical protein compare
MPMX19_05095 +0.6 1.9 Toxin YoeB compare
MPMX19_06522 +0.6 2.3 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04791 +0.6 1.3 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_06804 +0.6 1.2 hypothetical protein compare
MPMX19_05271 +0.6 1.4 hypothetical protein compare
MPMX19_00864 +0.6 2.2 Flagellar hook-basal body complex protein FliE compare
MPMX19_02850 +0.6 2.0 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_06890 +0.6 2.2 hypothetical protein compare
MPMX19_06505 +0.6 3.2 hypothetical protein compare
MPMX19_04788 +0.6 3.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04902 +0.6 2.6 hypothetical protein compare
MPMX19_05248 +0.6 3.3 hypothetical protein compare
MPMX19_06420 +0.6 1.8 hypothetical protein compare
MPMX19_06497 +0.6 2.4 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_01897 +0.6 5.2 hypothetical protein compare
MPMX19_02057 +0.6 1.9 hypothetical protein compare
MPMX19_03722 +0.6 0.9 hypothetical protein compare
MPMX19_01531 +0.6 4.4 hypothetical protein compare
MPMX19_05823 +0.6 3.1 hypothetical protein compare
MPMX19_06746 +0.6 0.9 Chemotaxis protein CheW compare
MPMX19_02246 +0.6 2.4 hypothetical protein compare
MPMX19_04421 +0.6 3.7 Chitooligosaccharide deacetylase ChbG compare
MPMX19_06601 +0.6 1.8 hypothetical protein compare
MPMX19_05411 +0.6 4.6 Periplasmic alpha-galactoside-binding protein compare
MPMX19_06156 +0.6 1.8 hypothetical protein compare
MPMX19_04200 +0.6 3.4 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_00907 +0.6 3.1 putative oxidoreductase YciK compare
MPMX19_02567 +0.6 3.4 hypothetical protein compare
MPMX19_04222 +0.6 4.7 hypothetical protein compare
MPMX19_03432 +0.5 2.9 hypothetical protein compare
MPMX19_01050 +0.5 1.4 hypothetical protein compare
MPMX19_04564 +0.5 3.4 hypothetical protein compare
MPMX19_05412 +0.5 4.1 Glutathione import ATP-binding protein GsiA compare
MPMX19_04089 +0.5 4.7 Flagellar biosynthesis protein FlhA compare
MPMX19_05410 +0.5 4.4 Dipeptide transport system permease protein DppB compare
MPMX19_03790 +0.5 0.8 hypothetical protein compare
MPMX19_04171 +0.5 1.2 16S ribosomal RNA compare
MPMX19_05849 +0.5 1.7 TorCAD operon transcriptional regulatory protein TorR compare
MPMX19_06299 +0.5 2.3 hypothetical protein compare
MPMX19_01831 +0.5 2.2 hypothetical protein compare
MPMX19_05826 +0.5 2.0 hypothetical protein compare
MPMX19_01403 +0.5 2.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with_fulln experiments