Experiment set2S253 for Azospirillum sp. SherDot2

Compare to:

NF_with10percent_fullN

200 most important genes:

  gene name fitness t score description  
MPMX19_03787 -3.1 -2.1 hypothetical protein compare
MPMX19_06765 -2.5 -2.5 Hydrogen peroxide-inducible genes activator compare
MPMX19_02511 -2.4 -1.6 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_05658 -2.3 -2.6 hypothetical protein compare
MPMX19_05254 -2.3 -2.2 Carbon monoxide dehydrogenase small chain compare
MPMX19_03631 -2.3 -2.1 hypothetical protein compare
MPMX19_06916 -2.2 -2.1 Crotonyl-CoA hydratase compare
MPMX19_04791 -2.0 -2.3 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_04968 -2.0 -1.4 hypothetical protein compare
MPMX19_01402 -2.0 -8.8 hypothetical protein compare
MPMX19_00126 -2.0 -2.9 hypothetical protein compare
MPMX19_02135 -1.9 -5.0 Phage shock protein B compare
MPMX19_00182 -1.9 -1.8 hypothetical protein compare
MPMX19_02629 -1.8 -12.0 hypothetical protein compare
MPMX19_05104 -1.8 -2.1 hypothetical protein compare
MPMX19_03195 -1.8 -1.6 hypothetical protein compare
MPMX19_03948 -1.8 -1.5 tRNA-Ser compare
MPMX19_05831 -1.8 -2.0 Protein/nucleic acid deglycase 2 compare
MPMX19_03157 -1.7 -2.0 hypothetical protein compare
MPMX19_04124 -1.7 -4.2 hypothetical protein compare
MPMX19_06193 -1.6 -1.9 Flagellar hook-basal body complex protein FliE compare
MPMX19_00712 -1.6 -3.2 hypothetical protein compare
MPMX19_00335 -1.6 -1.5 Magnesium transport protein CorA compare
MPMX19_03859 -1.6 -1.8 hypothetical protein compare
MPMX19_01139 -1.5 -6.3 hypothetical protein compare
MPMX19_00020 -1.5 -1.7 hypothetical protein compare
MPMX19_05725 -1.5 -3.0 hypothetical protein compare
MPMX19_04954 -1.5 -2.0 Putative hydro-lyase compare
MPMX19_02668 -1.5 -6.2 RNA polymerase sigma-54 factor 2 compare
MPMX19_01249 -1.5 -2.4 Periplasmic serine endoprotease DegP compare
MPMX19_01719 -1.5 -1.7 Putative fluoride ion transporter CrcB compare
MPMX19_03019 -1.5 -2.8 hypothetical protein compare
MPMX19_00066 -1.5 -1.0 hypothetical protein compare
MPMX19_06546 -1.5 -1.7 hypothetical protein compare
MPMX19_06768 -1.5 -2.3 hypothetical protein compare
MPMX19_03693 -1.4 -2.3 hypothetical protein compare
MPMX19_05813 -1.4 -2.4 2-hydroxy-3-oxopropionate reductase compare
MPMX19_06907 -1.4 -2.4 L-talarate/galactarate dehydratase compare
MPMX19_04638 -1.3 -1.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01767 -1.3 -6.5 hypothetical protein compare
MPMX19_02516 -1.3 -3.0 hypothetical protein compare
MPMX19_06001 -1.3 -2.3 hypothetical protein compare
MPMX19_01766 -1.3 -5.4 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_03096 -1.3 -1.3 hypothetical protein compare
MPMX19_04362 -1.3 -1.7 Cytidine deaminase compare
MPMX19_05454 -1.3 -2.4 hypothetical protein compare
MPMX19_02772 -1.3 -2.1 N-acetylcysteine deacetylase compare
MPMX19_02979 -1.3 -2.5 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_06207 -1.3 -2.5 hypothetical protein compare
MPMX19_06322 -1.3 -2.5 hypothetical protein compare
MPMX19_01577 -1.3 -2.5 hypothetical protein compare
MPMX19_04861 -1.3 -1.7 hypothetical protein compare
MPMX19_00695 -1.3 -1.8 putative transcriptional regulatory protein compare
MPMX19_02973 -1.2 -2.3 3-oxo-isoapionate-4-phosphate transcarboxylase/hydrolase compare
MPMX19_00986 -1.2 -5.3 Ribonuclease D compare
MPMX19_05726 -1.2 -1.5 hypothetical protein compare
MPMX19_06241 -1.2 -3.0 hypothetical protein compare
MPMX19_00478 -1.2 -1.1 putative protein RP812 compare
MPMX19_03635 -1.2 -1.4 DNA-binding transcriptional activator DecR compare
MPMX19_02618 -1.2 -1.6 Transcriptional regulatory protein BaeR compare
MPMX19_05519 -1.2 -5.4 LL-diaminopimelate aminotransferase compare
MPMX19_02266 -1.2 -2.9 hypothetical protein compare
MPMX19_04701 -1.2 -1.2 Transcriptional regulatory protein FixJ compare
MPMX19_04579 -1.2 -2.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_02134 -1.2 -3.8 Phage shock protein C compare
MPMX19_04521 -1.2 -2.9 Bifunctional protein PaaZ compare
MPMX19_04636 -1.2 -1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_06759 -1.2 -1.7 Taurine import ATP-binding protein TauB compare
MPMX19_02504 -1.2 -2.9 hypothetical protein compare
MPMX19_01117 -1.2 -2.5 GTPase HflX compare
MPMX19_04271 -1.2 -2.2 Response regulator rcp1 compare
MPMX19_06964 -1.2 -2.3 HTH-type transcriptional regulator KipR compare
MPMX19_01140 -1.1 -5.9 hypothetical protein compare
MPMX19_02218 -1.1 -1.2 hypothetical protein compare
MPMX19_03109 -1.1 -2.2 hypothetical protein compare
MPMX19_00694 -1.1 -1.9 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_00015 -1.1 -2.0 hypothetical protein compare
MPMX19_05173 -1.1 -2.5 hypothetical protein compare
MPMX19_01157 -1.1 -3.8 hypothetical protein compare
MPMX19_06862 -1.1 -1.9 hypothetical protein compare
MPMX19_05598 -1.1 -3.6 hypothetical protein compare
MPMX19_03050 -1.1 -2.2 hypothetical protein compare
MPMX19_05152 -1.1 -1.7 Phosphonoacetaldehyde hydrolase compare
MPMX19_01718 -1.1 -1.6 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_00234 -1.1 -1.7 hypothetical protein compare
MPMX19_04431 -1.1 -6.6 hypothetical protein compare
MPMX19_00856 -1.1 -4.4 Low affinity potassium transport system protein kup compare
MPMX19_01141 -1.1 -3.1 hypothetical protein compare
MPMX19_06929 -1.1 -1.8 hypothetical protein compare
MPMX19_00319 -1.1 -0.8 hypothetical protein compare
MPMX19_03752 -1.0 -1.4 hypothetical protein compare
MPMX19_04644 -1.0 -1.7 hypothetical protein compare
MPMX19_02000 -1.0 -4.4 Aspartate-semialdehyde dehydrogenase 2 compare
MPMX19_03242 -1.0 -4.0 ABC transporter ATP-binding/permease protein YojI compare
MPMX19_06134 -1.0 -2.1 hypothetical protein compare
MPMX19_02851 -1.0 -2.1 hypothetical protein compare
MPMX19_02138 -1.0 -5.9 Psp operon transcriptional activator compare
MPMX19_04218 -1.0 -2.6 Protein phosphatase PrpC compare
MPMX19_01913 -1.0 -5.1 hypothetical protein compare
MPMX19_05954 -1.0 -3.3 hypothetical protein compare
MPMX19_06610 -1.0 -1.3 hypothetical protein compare
MPMX19_05107 -1.0 -3.4 Glycine betaine uptake system permease protein YehY compare
MPMX19_03360 -1.0 -2.4 hypothetical protein compare
MPMX19_01720 -1.0 -2.0 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_03973 -1.0 -4.5 Esterase YbfF compare
MPMX19_04682 -1.0 -1.3 hypothetical protein compare
MPMX19_01645 -1.0 -1.1 HTH-type transcriptional regulator GltC compare
MPMX19_00572 -1.0 -2.5 Type-4 uracil-DNA glycosylase compare
MPMX19_03582 -1.0 -2.6 Response regulator protein TmoT compare
MPMX19_05300 -1.0 -2.2 Signal transduction histidine-protein kinase AtoS compare
MPMX19_06090 -1.0 -0.9 Pyruvate dehydrogenase complex repressor compare
MPMX19_06395 -1.0 -2.0 Inner membrane protein YqaA compare
MPMX19_01987 -1.0 -2.6 Anhydro-N-acetylmuramic acid kinase compare
MPMX19_03724 -1.0 -1.3 hypothetical protein compare
MPMX19_00904 -1.0 -4.1 DNA repair protein RadA compare
MPMX19_04390 -1.0 -1.4 hypothetical protein compare
MPMX19_05798 -1.0 -1.4 HTH-type transcriptional repressor NanR compare
MPMX19_06309 -1.0 -2.3 hypothetical protein compare
MPMX19_03092 -1.0 -2.7 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX19_02466 -1.0 -1.7 Octopine permease ATP-binding protein P compare
MPMX19_03123 -1.0 -1.4 Citrate lyase acyl carrier protein compare
MPMX19_02075 -1.0 -3.8 hypothetical protein compare
MPMX19_06874 -1.0 -1.7 hypothetical protein compare
MPMX19_04013 -1.0 -2.0 hypothetical protein compare
MPMX19_01729 -1.0 -1.6 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_06261 -1.0 -2.5 hypothetical protein compare
MPMX19_02116 -0.9 -1.0 Cold shock protein CspA compare
MPMX19_06656 -0.9 -5.2 Dodecaprenyl-phosphate galacturonate synthase compare
MPMX19_00887 -0.9 -1.3 hypothetical protein compare
MPMX19_02495 -0.9 -3.5 Ribokinase compare
MPMX19_03298 -0.9 -1.3 hypothetical protein compare
MPMX19_00233 -0.9 -6.3 hypothetical protein compare
MPMX19_06923 -0.9 -1.7 hypothetical protein compare
MPMX19_04615 -0.9 -1.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06326 -0.9 -2.3 hypothetical protein compare
MPMX19_01149 -0.9 -2.8 Polyphosphate kinase compare
MPMX19_00696 -0.9 -2.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_03081 -0.9 -1.5 Protein FecR compare
MPMX19_03825 -0.9 -1.0 IS5 family transposase IS4811 compare
MPMX19_02585 -0.9 -5.6 hypothetical protein compare
MPMX19_02551 -0.9 -1.6 hypothetical protein compare
MPMX19_06518 -0.9 -2.6 Methionine import system permease protein MetP compare
MPMX19_05965 -0.9 -3.1 Glycerol-3-phosphate regulon repressor compare
MPMX19_05541 -0.9 -4.0 Arsenate reductase compare
MPMX19_06455 -0.9 -3.4 Tyrosine recombinase XerC compare
MPMX19_01196 -0.9 -1.8 hypothetical protein compare
MPMX19_01854 -0.9 -4.0 hypothetical protein compare
MPMX19_01916 -0.9 -2.7 Putative acid--amine ligase YgiC compare
MPMX19_06748 -0.9 -2.5 Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon compare
MPMX19_05554 -0.9 -2.2 hypothetical protein compare
MPMX19_02573 -0.9 -2.0 Dihydrofolate reductase compare
MPMX19_01042 -0.9 -2.6 hypothetical protein compare
MPMX19_06448 -0.9 -2.6 hypothetical protein compare
MPMX19_06506 -0.8 -1.4 hypothetical protein compare
MPMX19_06834 -0.8 -3.4 Vitamin B6 salvage pathway transcriptional repressor PtsJ compare
MPMX19_00128 -0.8 -5.8 hypothetical protein compare
MPMX19_02744 -0.8 -2.4 Magnesium transport protein CorA compare
MPMX19_00758 -0.8 -3.4 putative protein YqeY compare
MPMX19_06263 -0.8 -1.9 hypothetical protein compare
MPMX19_05358 -0.8 -1.0 hypothetical protein compare
MPMX19_00318 -0.8 -2.8 hypothetical protein compare
MPMX19_03646 -0.8 -2.9 Histidinol-phosphate aminotransferase compare
MPMX19_03735 -0.8 -1.9 Transposon Tn10 TetC protein compare
MPMX19_03694 -0.8 -1.1 hypothetical protein compare
MPMX19_02095 -0.8 -1.4 Ferric uptake regulation protein compare
MPMX19_02792 -0.8 -2.4 HTH-type transcriptional regulator KipR compare
MPMX19_05195 -0.8 -1.8 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_05751 -0.8 -4.4 hypothetical protein compare
MPMX19_04449 -0.8 -0.9 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_02198 -0.8 -2.1 hypothetical protein compare
MPMX19_03465 -0.8 -2.1 Acetyl-CoA acetyltransferase compare
MPMX19_04408 -0.8 -1.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase compare
MPMX19_04952 -0.8 -1.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01703 -0.8 -1.1 hypothetical protein compare
MPMX19_06015 -0.8 -1.8 Aerobic respiration control protein ArcA compare
MPMX19_03491 -0.8 -1.5 putative FAD-linked oxidoreductase compare
MPMX19_05170 -0.8 -2.2 Fe(3+) dicitrate transport ATP-binding protein FecE compare
MPMX19_00346 -0.8 -2.8 Trehalose-phosphate phosphatase compare
MPMX19_05101 -0.8 -3.0 Intermembrane transport protein PqiA compare
MPMX19_06471 -0.8 -2.0 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_05734 -0.8 -2.3 Tol-Pal system protein TolQ compare
MPMX19_03663 -0.8 -2.5 hypothetical protein compare
MPMX19_01155 -0.8 -2.8 hypothetical protein compare
MPMX19_02584 -0.8 -5.2 hypothetical protein compare
MPMX19_05987 -0.8 -2.4 Inner membrane protein YqaA compare
MPMX19_04869 -0.8 -2.3 DNA polymerase I compare
MPMX19_02248 -0.8 -2.0 hypothetical protein compare
MPMX19_01643 -0.8 -3.0 hypothetical protein compare
MPMX19_05233 -0.8 -2.8 Glycine betaine/proline betaine transport system ATP-binding protein ProV compare
MPMX19_01012 -0.8 -1.7 Cyclic pyranopterin monophosphate synthase compare
MPMX19_05003 -0.8 -2.4 NAD(P)H dehydrogenase (quinone) compare
MPMX19_04085 -0.8 -1.1 hypothetical protein compare
MPMX19_01614 -0.8 -1.5 hypothetical protein compare
MPMX19_02586 -0.8 -4.1 Phosphate import ATP-binding protein PstB compare
MPMX19_06887 -0.8 -1.3 Adenine deaminase compare
MPMX19_01912 -0.8 -1.5 Acetyl-CoA acetyltransferase compare
MPMX19_05934 -0.8 -1.6 Arylesterase compare
MPMX19_04823 -0.8 -4.3 hypothetical protein compare
MPMX19_04044 -0.8 -2.9 Arsenical-resistance protein Acr3 compare
MPMX19_03618 -0.8 -1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with10percent_fulln experiments