Experiment set2S252 for Azospirillum sp. SherDot2
NF_with10percent_fullN
Group: nf_with10percent_fullnMedia: NF_with10percent_fullN
Culturing: Azospirillum_SherDot2_ML2, at 30 (C)
By: Doty lab on 11-Jan-24
Media components: 5 g/L Sucrose, 5 g/L D-Mannitol, 3.51 mM Sodium D,L-Lactate, 0.8 g/L Potassium phosphate dibasic, 0.2 g/L Potassium phosphate monobasic, 0.1 g/L Sodium Chloride, 0.025 g/L Sodium Molybdate Dihydrate, 0.028 g/L EDTA (disodium salt), 0.2 g/L Magnesium Sulfate Heptahydrate, 0.06 g/L Calcium chloride dihydrate, 0.1 g/L Ammonium chloride
Specific Phenotypes
For 2 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Glycerol and Glycerol-3-phosphate Uptake and Utilization | 1 |
| Glycerolipid and Glycerophospholipid Metabolism in Bacteria | 1 |
| cAMP signaling in bacteria | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| glycerol-3-phosphate shuttle | 2 | 2 | 1 |
| CDP-diacylglycerol biosynthesis II | 4 | 4 | 1 |
| CDP-diacylglycerol biosynthesis I | 4 | 4 | 1 |
| phosphatidate biosynthesis (yeast) | 5 | 3 | 1 |
| CDP-diacylglycerol biosynthesis III | 5 | 3 | 1 |
| glucosylglycerol biosynthesis | 5 | 3 | 1 |
| phosphatidylglycerol biosynthesis II | 6 | 5 | 1 |
| phosphatidylglycerol biosynthesis I | 6 | 5 | 1 |
| 1,3-propanediol biosynthesis (engineered) | 9 | 5 | 1 |
| superpathway of phospholipid biosynthesis III (E. coli) | 12 | 9 | 1 |
| superpathway of cardiolipin biosynthesis (bacteria) | 13 | 7 | 1 |
| superpathway of phospholipid biosynthesis II (plants) | 28 | 9 | 1 |