Experiment set2S250 for Azospirillum sp. SherDot2

Compare to:

NF_with10percent_fullN

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_01084 +3.4 11.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_02392 +3.2 29.3 Aspartate/prephenate aminotransferase compare
MPMX19_05361 +3.1 17.1 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_06050 +3.1 28.8 Phosphoenolpyruvate carboxylase compare
MPMX19_00650 +3.1 22.9 Siroheme synthase compare
MPMX19_00652 +3.1 28.5 Sulfite reductase [ferredoxin] compare
MPMX19_01053 +3.1 12.8 Dihydroorotase compare
MPMX19_00530 +2.9 10.5 Orotate phosphoribosyltransferase compare
MPMX19_00653 +2.9 16.7 hypothetical protein compare
MPMX19_05119 +2.9 25.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00607 +2.9 23.1 3-isopropylmalate dehydrogenase compare
MPMX19_01914 +2.8 22.0 hypothetical protein compare
MPMX19_00647 +2.8 23.1 Bifunctional enzyme CysN/CysC compare
MPMX19_01113 +2.8 13.9 Adaptive-response sensory-kinase SasA compare
MPMX19_00651 +2.6 15.2 hypothetical protein compare
MPMX19_02657 +2.6 24.3 Glutamate synthase [NADPH] large chain compare
MPMX19_05727 +2.6 16.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_01822 +2.6 18.5 2-isopropylmalate synthase compare
MPMX19_02658 +2.6 21.4 Glutamate synthase [NADPH] small chain compare
MPMX19_01998 +2.6 17.6 3-isopropylmalate dehydratase large subunit compare
MPMX19_00648 +2.6 18.2 Sulfate adenylyltransferase subunit 2 compare
MPMX19_02674 +2.5 7.6 NADH:quinone reductase compare
MPMX19_00262 +2.5 8.1 Thiazole synthase compare
MPMX19_02227 +2.5 21.3 Pyruvate, phosphate dikinase compare
MPMX19_00649 +2.5 10.3 Phosphoadenosine phosphosulfate reductase compare
MPMX19_01054 +2.4 12.9 Aspartate carbamoyltransferase compare
MPMX19_00606 +2.4 16.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_06723 +2.3 10.6 hypothetical protein compare
MPMX19_04114 +2.3 7.3 hypothetical protein compare
MPMX19_04391 +2.3 13.9 Homoserine O-acetyltransferase compare
MPMX19_00260 +2.3 6.9 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00693 +2.3 13.4 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_00906 +2.2 16.3 Amidophosphoribosyltransferase compare
MPMX19_01364 +2.1 18.5 O-succinylhomoserine sulfhydrylase compare
MPMX19_04368 +2.1 18.3 Glutathione amide reductase compare
MPMX19_00236 +2.1 8.1 HTH-type transcriptional regulator IscR compare
MPMX19_04392 +2.1 5.5 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_00351 +2.0 12.3 hypothetical protein compare
MPMX19_05442 +2.0 8.2 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_00475 +2.0 5.4 hypothetical protein compare
MPMX19_04112 +2.0 7.8 hypothetical protein compare
MPMX19_02162 +2.0 16.5 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_02011 +2.0 7.3 RNA helicase CrhR compare
MPMX19_01560 +1.9 7.2 3'-5' exonuclease DinG compare
MPMX19_06880 +1.9 2.9 Validamycin A dioxygenase compare
MPMX19_00635 +1.9 14.1 5,10-methylenetetrahydrofolate reductase compare
MPMX19_05357 +1.8 14.8 hypothetical protein compare
MPMX19_01304 +1.8 10.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_04898 +1.8 6.4 Transcriptional regulatory protein LnrK compare
MPMX19_04257 +1.8 11.2 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase compare
MPMX19_01939 +1.6 6.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_01719 +1.6 3.0 Putative fluoride ion transporter CrcB compare
MPMX19_00139 +1.6 4.8 hypothetical protein compare
MPMX19_05235 +1.5 3.3 HTH-type transcriptional regulator BetI compare
MPMX19_00600 +1.5 6.7 hypothetical protein compare
MPMX19_03095 +1.5 3.5 hypothetical protein compare
MPMX19_01883 +1.5 5.7 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_05068 +1.5 6.4 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_02962 +1.4 7.3 hypothetical protein compare
MPMX19_01394 +1.4 2.4 hypothetical protein compare
MPMX19_06276 +1.4 6.3 hypothetical protein compare
MPMX19_01499 +1.4 4.3 hypothetical protein compare
MPMX19_04913 +1.4 2.3 hypothetical protein compare
MPMX19_00134 +1.4 4.7 hypothetical protein compare
MPMX19_02937 +1.4 3.1 hypothetical protein compare
MPMX19_01796 +1.4 1.9 hypothetical protein compare
MPMX19_06180 +1.4 3.6 Sensor histidine kinase RegB compare
MPMX19_05800 +1.4 8.2 hypothetical protein compare
MPMX19_05332 +1.3 6.6 HTH-type transcriptional regulator GntR compare
MPMX19_06866 +1.3 3.5 HTH-type transcriptional regulator NimR compare
MPMX19_00050 +1.3 4.6 Pyridoxal phosphate homeostasis protein compare
MPMX19_00186 +1.3 3.4 hypothetical protein compare
MPMX19_04482 +1.3 5.8 HTH-type transcriptional regulator DegA compare
MPMX19_06730 +1.3 10.6 hypothetical protein compare
MPMX19_02543 +1.3 3.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00131 +1.3 2.1 hypothetical protein compare
MPMX19_01217 +1.3 4.1 Ribosomal RNA small subunit methyltransferase C compare
MPMX19_02988 +1.3 4.4 hypothetical protein compare
MPMX19_00632 +1.3 3.5 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX19_01630 +1.3 4.1 Phosphoribosylamine--glycine ligase compare
MPMX19_00156 +1.3 5.6 hypothetical protein compare
MPMX19_04419 +1.2 9.3 Periplasmic dipeptide transport protein compare
MPMX19_05624 +1.2 2.1 hypothetical protein compare
MPMX19_01884 +1.2 2.1 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_05412 +1.2 8.2 Glutathione import ATP-binding protein GsiA compare
MPMX19_04094 +1.2 8.9 Flagellar M-ring protein compare
MPMX19_00634 +1.2 7.3 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_04347 +1.2 4.1 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_06547 +1.2 5.1 hypothetical protein compare
MPMX19_03934 +1.2 3.1 hypothetical protein compare
MPMX19_00680 +1.2 2.3 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_05690 +1.2 6.4 Protein phosphotransferase ChpT compare
MPMX19_01479 +1.2 5.7 hypothetical protein compare
MPMX19_05411 +1.2 8.9 Periplasmic alpha-galactoside-binding protein compare
MPMX19_02514 +1.2 2.3 hypothetical protein compare
MPMX19_03798 +1.2 3.9 hypothetical protein compare
MPMX19_00140 +1.2 5.2 hypothetical protein compare
MPMX19_03722 +1.2 1.9 hypothetical protein compare
MPMX19_01495 +1.2 2.0 hypothetical protein compare
MPMX19_03001 +1.1 3.5 Ribulokinase compare
MPMX19_05761 +1.1 8.2 Ribosomal protein S12 methylthiotransferase RimO compare
MPMX19_04937 +1.1 3.5 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX19_05818 +1.1 1.8 hypothetical protein compare
MPMX19_06545 +1.1 9.8 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04087 +1.1 4.1 Flagellum site-determining protein YlxH compare
MPMX19_00152 +1.1 2.0 hypothetical protein compare
MPMX19_01890 +1.1 6.8 Glyoxalase ElbB compare
MPMX19_00132 +1.1 2.5 hypothetical protein compare
MPMX19_04258 +1.1 2.9 hypothetical protein compare
MPMX19_02084 +1.1 1.7 hypothetical protein compare
MPMX19_02268 +1.1 4.5 hypothetical protein compare
MPMX19_05364 +1.1 4.4 Acetate CoA-transferase subunit beta compare
MPMX19_06655 +1.1 8.2 hypothetical protein compare
MPMX19_03790 +1.1 1.4 hypothetical protein compare
MPMX19_05581 +1.1 1.4 hypothetical protein compare
MPMX19_06279 +1.1 5.7 L-threonine kinase compare
MPMX19_00777 +1.1 5.9 hypothetical protein compare
MPMX19_06519 +1.1 1.9 HTH-type transcriptional repressor NagR compare
MPMX19_04647 +1.1 2.6 hypothetical protein compare
MPMX19_02687 +1.1 5.5 hypothetical protein compare
MPMX19_05816 +1.1 4.1 Thiol-disulfide oxidoreductase ResA compare
MPMX19_05410 +1.1 7.9 Dipeptide transport system permease protein DppB compare
MPMX19_06914 +1.1 2.1 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_01480 +1.1 4.4 hypothetical protein compare
MPMX19_01777 +1.1 5.7 2-aminoadipate transaminase compare
MPMX19_02745 +1.1 3.1 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
MPMX19_04952 +1.0 1.9 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06014 +1.0 5.5 Histidinol-phosphate aminotransferase compare
MPMX19_03769 +1.0 6.4 hypothetical protein compare
MPMX19_00871 +1.0 7.9 hypothetical protein compare
MPMX19_01014 +1.0 2.3 Indole-3-glycerol phosphate synthase compare
MPMX19_00112 +1.0 3.1 Multidrug transporter EmrE compare
MPMX19_05827 +1.0 8.2 hypothetical protein compare
MPMX19_01872 +1.0 4.8 hypothetical protein compare
MPMX19_00663 +1.0 3.0 hypothetical protein compare
MPMX19_05379 +1.0 2.7 hypothetical protein compare
MPMX19_03768 +1.0 3.1 hypothetical protein compare
MPMX19_04680 +1.0 2.2 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_01610 +1.0 1.6 ATP-dependent DNA helicase PcrA compare
MPMX19_00138 +1.0 6.1 hypothetical protein compare
MPMX19_01319 +1.0 5.9 hypothetical protein compare
MPMX19_01416 +1.0 4.6 hypothetical protein compare
MPMX19_05451 +1.0 5.2 hypothetical protein compare
MPMX19_03450 +1.0 1.9 hypothetical protein compare
MPMX19_00574 +1.0 2.9 hypothetical protein compare
MPMX19_02177 +1.0 3.8 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_00854 +1.0 8.5 hypothetical protein compare
MPMX19_06230 +1.0 2.0 hypothetical protein compare
MPMX19_05248 +1.0 4.8 hypothetical protein compare
MPMX19_01248 +1.0 3.8 hypothetical protein compare
MPMX19_06327 +1.0 2.0 hypothetical protein compare
MPMX19_06817 +1.0 2.7 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_01875 +0.9 2.8 hypothetical protein compare
MPMX19_04415 +0.9 5.9 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_04207 +0.9 3.7 hypothetical protein compare
MPMX19_01531 +0.9 6.6 hypothetical protein compare
MPMX19_00633 +0.9 3.5 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_03655 +0.9 1.7 hypothetical protein compare
MPMX19_04991 +0.9 6.1 hypothetical protein compare
MPMX19_00609 +0.9 2.9 Chemotaxis protein CheY compare
MPMX19_06053 +0.9 5.9 hypothetical protein compare
MPMX19_01653 +0.9 4.9 Serine acetyltransferase compare
MPMX19_04416 +0.9 5.3 Dipeptide transport ATP-binding protein DppD compare
MPMX19_00840 +0.9 3.5 Pyridoxine 5'-phosphate synthase compare
MPMX19_03045 +0.9 4.2 hypothetical protein compare
MPMX19_02801 +0.9 1.7 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05453 +0.9 2.8 hypothetical protein compare
MPMX19_01497 +0.9 2.6 hypothetical protein compare
MPMX19_03276 +0.9 2.0 hypothetical protein compare
MPMX19_03054 +0.9 3.5 putative ABC transporter permease protein NosY compare
MPMX19_02524 +0.9 5.6 tRNA pseudouridine synthase B compare
MPMX19_01729 +0.9 2.5 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_05095 +0.9 2.1 Toxin YoeB compare
MPMX19_06169 +0.9 3.2 hypothetical protein compare
MPMX19_03648 +0.9 6.6 hypothetical protein compare
MPMX19_00184 +0.9 3.7 hypothetical protein compare
MPMX19_05409 +0.9 4.1 hypothetical protein compare
MPMX19_03141 +0.9 2.1 hypothetical protein compare
MPMX19_00576 +0.9 1.9 hypothetical protein compare
MPMX19_02702 +0.9 2.1 hypothetical protein compare
MPMX19_02664 +0.9 2.2 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_02737 +0.9 2.2 Tryptophan synthase alpha chain compare
MPMX19_00863 +0.9 4.7 Flagellar basal-body rod protein FlgC compare
MPMX19_02116 +0.9 1.5 Cold shock protein CspA compare
MPMX19_05203 +0.9 2.0 hypothetical protein compare
MPMX19_04092 +0.9 5.0 Flagellar motor switch protein FliN compare
MPMX19_02265 +0.9 5.1 Sporulation initiation inhibitor protein Soj compare
MPMX19_06601 +0.9 2.3 hypothetical protein compare
MPMX19_04990 +0.9 2.3 Hydrogen peroxide-inducible genes activator compare
MPMX19_00666 +0.9 4.5 hypothetical protein compare
MPMX19_06544 +0.9 6.4 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_06321 +0.9 2.7 hypothetical protein compare
MPMX19_02123 +0.9 2.6 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_06754 +0.9 4.7 hypothetical protein compare
MPMX19_00868 +0.9 7.3 Sensor kinase CckA compare
MPMX19_05139 +0.9 2.3 CRISPR-associated endoribonuclease Cas2 compare
MPMX19_04417 +0.9 6.0 Dipeptide transport system permease protein DppC compare
MPMX19_06278 +0.8 5.1 S-sulfocysteine synthase compare
MPMX19_01559 +0.8 3.3 hypothetical protein compare
MPMX19_06752 +0.8 2.4 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment