Experiment set2S249 for Azospirillum sp. SherDot2

Compare to:

NF_with10percent_fullN

200 most important genes:

  gene name fitness t score description  
MPMX19_05207 -3.1 -2.1 Hemolysin secretion protein D, plasmid compare
MPMX19_05798 -2.8 -1.9 HTH-type transcriptional repressor NanR compare
MPMX19_02980 -2.6 -1.8 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_04638 -2.3 -1.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04681 -2.2 -2.9 5-hydroxyisourate hydrolase compare
MPMX19_05586 -2.1 -2.4 hypothetical protein compare
MPMX19_01491 -2.0 -1.9 hypothetical protein compare
MPMX19_06001 -2.0 -1.9 hypothetical protein compare
MPMX19_02706 -1.9 -4.0 hypothetical protein compare
MPMX19_04958 -1.9 -2.2 Methyl-accepting chemotaxis protein compare
MPMX19_01766 -1.9 -5.8 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_04408 -1.8 -1.7 tRNA1(Val) (adenine(37)-N6)-methyltransferase compare
MPMX19_02629 -1.7 -11.3 hypothetical protein compare
MPMX19_00142 -1.7 -2.0 hypothetical protein compare
MPMX19_01918 -1.7 -1.6 tRNA-Ala compare
MPMX19_05454 -1.7 -2.5 hypothetical protein compare
MPMX19_01748 -1.7 -2.0 hypothetical protein compare
MPMX19_02000 -1.7 -5.5 Aspartate-semialdehyde dehydrogenase 2 compare
MPMX19_04124 -1.7 -4.0 hypothetical protein compare
MPMX19_02668 -1.7 -6.1 RNA polymerase sigma-54 factor 2 compare
MPMX19_00362 -1.7 -2.7 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01140 -1.6 -6.6 hypothetical protein compare
MPMX19_01075 -1.6 -1.6 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_06419 -1.6 -2.1 IS110 family transposase ISHne3 compare
MPMX19_01141 -1.6 -3.5 hypothetical protein compare
MPMX19_05725 -1.6 -2.5 hypothetical protein compare
MPMX19_00694 -1.5 -2.1 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_04449 -1.5 -1.8 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_06759 -1.5 -2.0 Taurine import ATP-binding protein TauB compare
MPMX19_01402 -1.5 -7.1 hypothetical protein compare
MPMX19_04010 -1.5 -1.4 Isoaspartyl peptidase compare
MPMX19_03693 -1.5 -2.2 hypothetical protein compare
MPMX19_03787 -1.5 -1.4 hypothetical protein compare
MPMX19_03072 -1.5 -1.5 hypothetical protein compare
MPMX19_06808 -1.5 -2.0 HTH-type transcriptional regulator DmlR compare
MPMX19_02138 -1.5 -7.2 Psp operon transcriptional activator compare
MPMX19_05181 -1.5 -1.7 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04431 -1.5 -8.1 hypothetical protein compare
MPMX19_01125 -1.5 -1.6 hypothetical protein compare
MPMX19_03735 -1.4 -2.5 Transposon Tn10 TetC protein compare
MPMX19_06519 -1.4 -1.4 HTH-type transcriptional repressor NagR compare
MPMX19_01139 -1.4 -5.7 hypothetical protein compare
MPMX19_00675 -1.4 -1.9 Peptidoglycan-associated lipoprotein compare
MPMX19_03929 -1.4 -2.8 hypothetical protein compare
MPMX19_04492 -1.4 -2.4 hypothetical protein compare
MPMX19_03676 -1.4 -2.3 hypothetical protein compare
MPMX19_01059 -1.4 -1.5 hypothetical protein compare
MPMX19_03195 -1.4 -1.1 hypothetical protein compare
MPMX19_06337 -1.4 -3.1 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_05044 -1.3 -1.3 hypothetical protein compare
MPMX19_01157 -1.3 -3.9 hypothetical protein compare
MPMX19_05387 -1.3 -1.2 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_01767 -1.3 -5.8 hypothetical protein compare
MPMX19_01961 -1.3 -1.9 Small heat shock protein IbpA compare
MPMX19_03127 -1.3 -1.9 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX19_00361 -1.3 -2.7 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00875 -1.3 -2.4 hypothetical protein compare
MPMX19_00712 -1.3 -3.1 hypothetical protein compare
MPMX19_04085 -1.3 -1.8 hypothetical protein compare
MPMX19_01627 -1.3 -2.5 hypothetical protein compare
MPMX19_04390 -1.3 -1.5 hypothetical protein compare
MPMX19_00746 -1.2 -2.3 hypothetical protein compare
MPMX19_02136 -1.2 -1.2 Phage shock protein A compare
MPMX19_06130 -1.2 -3.0 hypothetical protein compare
MPMX19_00773 -1.2 -2.3 hypothetical protein compare
MPMX19_02580 -1.2 -1.6 Acetyltransferase compare
MPMX19_05175 -1.2 -2.2 hypothetical protein compare
MPMX19_06862 -1.2 -1.8 hypothetical protein compare
MPMX19_06012 -1.2 -3.3 Transcriptional regulatory protein DegU compare
MPMX19_02495 -1.2 -4.1 Ribokinase compare
MPMX19_01854 -1.2 -4.6 hypothetical protein compare
MPMX19_05519 -1.2 -4.9 LL-diaminopimelate aminotransferase compare
MPMX19_04687 -1.2 -1.7 Atrazine chlorohydrolase compare
MPMX19_04430 -1.2 -2.5 hypothetical protein compare
MPMX19_06490 -1.2 -1.3 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00986 -1.1 -4.8 Ribonuclease D compare
MPMX19_03715 -1.1 -2.4 Response regulator ArlR compare
MPMX19_00447 -1.1 -2.1 hypothetical protein compare
MPMX19_06932 -1.1 -2.6 hypothetical protein compare
MPMX19_01323 -1.1 -2.0 hypothetical protein compare
MPMX19_02579 -1.1 -1.6 hypothetical protein compare
MPMX19_02744 -1.1 -2.9 Magnesium transport protein CorA compare
MPMX19_04701 -1.1 -1.2 Transcriptional regulatory protein FixJ compare
MPMX19_04058 -1.1 -2.2 Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA compare
MPMX19_02981 -1.1 -2.9 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06199 -1.1 -2.3 GTPase HflX compare
MPMX19_05152 -1.1 -1.6 Phosphonoacetaldehyde hydrolase compare
MPMX19_03306 -1.1 -1.8 hypothetical protein compare
MPMX19_05656 -1.1 -1.7 HTH-type transcriptional activator RhaR compare
MPMX19_06546 -1.1 -1.3 hypothetical protein compare
MPMX19_00036 -1.1 -2.2 hypothetical protein compare
MPMX19_02585 -1.1 -6.4 hypothetical protein compare
MPMX19_06534 -1.1 -2.0 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_01577 -1.1 -2.1 hypothetical protein compare
MPMX19_05060 -1.1 -3.2 hypothetical protein compare
MPMX19_06506 -1.1 -1.5 hypothetical protein compare
MPMX19_05954 -1.1 -3.2 hypothetical protein compare
MPMX19_03109 -1.1 -2.1 hypothetical protein compare
MPMX19_03019 -1.1 -2.3 hypothetical protein compare
MPMX19_03973 -1.0 -4.5 Esterase YbfF compare
MPMX19_06485 -1.0 -2.5 putative malonic semialdehyde reductase RutE compare
MPMX19_01448 -1.0 -1.8 hypothetical protein compare
MPMX19_04422 -1.0 -3.3 Benzoate--CoA ligase compare
MPMX19_00517 -1.0 -2.4 HTH-type transcriptional activator AmpR compare
MPMX19_03038 -1.0 -2.1 hypothetical protein compare
MPMX19_04968 -1.0 -1.2 hypothetical protein compare
MPMX19_05686 -1.0 -1.6 Chemotaxis protein CheY compare
MPMX19_03335 -1.0 -1.2 hypothetical protein compare
MPMX19_06090 -1.0 -0.9 Pyruvate dehydrogenase complex repressor compare
MPMX19_03320 -1.0 -1.5 hypothetical protein compare
MPMX19_03073 -1.0 -2.1 hypothetical protein compare
MPMX19_02544 -1.0 -2.3 hypothetical protein compare
MPMX19_05271 -1.0 -1.0 hypothetical protein compare
MPMX19_03085 -1.0 -1.3 Hydrogen peroxide-inducible genes activator compare
MPMX19_04882 -1.0 -3.6 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_05188 -1.0 -2.4 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_01615 -1.0 -3.1 Inner membrane protein YccF compare
MPMX19_04791 -1.0 -1.7 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_04881 -1.0 -4.6 Putrescine transport system permease protein PotH compare
MPMX19_04647 -1.0 -1.6 hypothetical protein compare
MPMX19_05254 -1.0 -1.3 Carbon monoxide dehydrogenase small chain compare
MPMX19_04696 -1.0 -2.0 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_02927 -1.0 -2.4 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_04823 -1.0 -5.0 hypothetical protein compare
MPMX19_04779 -1.0 -1.5 hypothetical protein compare
MPMX19_02584 -0.9 -5.8 hypothetical protein compare
MPMX19_04759 -0.9 -1.9 HTH-type transcriptional regulator LutR compare
MPMX19_01596 -0.9 -2.1 hypothetical protein compare
MPMX19_04490 -0.9 -2.9 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MPMX19_06924 -0.9 -2.4 hypothetical protein compare
MPMX19_04740 -0.9 -2.0 hypothetical protein compare
MPMX19_04579 -0.9 -1.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_06656 -0.9 -5.1 Dodecaprenyl-phosphate galacturonate synthase compare
MPMX19_01913 -0.9 -4.5 hypothetical protein compare
MPMX19_03850 -0.9 -5.5 Glycogen operon protein GlgX compare
MPMX19_01613 -0.9 -1.7 hypothetical protein compare
MPMX19_02075 -0.9 -3.4 hypothetical protein compare
MPMX19_01601 -0.9 -3.0 DNA repair protein RecN compare
MPMX19_05590 -0.9 -2.3 HTH-type transcriptional regulator SyrM 1 compare
MPMX19_06235 -0.9 -1.9 Glycine cleavage system transcriptional activator compare
MPMX19_03093 -0.9 -1.8 Manganese import ATP-binding protein ScaC compare
MPMX19_03614 -0.9 -3.5 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] compare
MPMX19_05241 -0.9 -2.1 hypothetical protein compare
MPMX19_06928 -0.9 -1.2 hypothetical protein compare
MPMX19_06198 -0.9 -2.1 hypothetical protein compare
MPMX19_02504 -0.9 -2.4 hypothetical protein compare
MPMX19_04273 -0.9 -2.7 NADH:quinone reductase compare
MPMX19_02516 -0.9 -2.1 hypothetical protein compare
MPMX19_06930 -0.9 -1.5 Sensor kinase CckA compare
MPMX19_03149 -0.9 -2.6 hypothetical protein compare
MPMX19_03141 -0.9 -1.4 hypothetical protein compare
MPMX19_02538 -0.9 -1.3 hypothetical protein compare
MPMX19_01692 -0.9 -3.9 Exopolyphosphatase compare
MPMX19_03655 -0.9 -1.0 hypothetical protein compare
MPMX19_00015 -0.9 -1.6 hypothetical protein compare
MPMX19_03050 -0.9 -2.0 hypothetical protein compare
MPMX19_04995 -0.9 -2.5 D-alanine aminotransferase compare
MPMX19_00297 -0.9 -1.0 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_02979 -0.9 -2.1 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_04793 -0.9 -3.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_02502 -0.9 -2.4 hypothetical protein compare
MPMX19_04208 -0.9 -2.0 flagellum biosynthesis repressor protein FlbT compare
MPMX19_00167 -0.9 -1.1 hypothetical protein compare
MPMX19_01160 -0.9 -4.5 Hydroxysqualene dehydroxylase compare
MPMX19_03634 -0.9 -2.1 Arginase compare
MPMX19_00233 -0.9 -5.7 hypothetical protein compare
MPMX19_05201 -0.9 -2.3 Hydroxycarboxylate dehydrogenase B compare
MPMX19_05677 -0.9 -2.4 hypothetical protein compare
MPMX19_06318 -0.9 -3.4 hypothetical protein compare
MPMX19_00266 -0.9 -1.3 hypothetical protein compare
MPMX19_06028 -0.9 -1.4 hypothetical protein compare
MPMX19_02089 -0.8 -1.9 hypothetical protein compare
MPMX19_01912 -0.8 -1.5 Acetyl-CoA acetyltransferase compare
MPMX19_03087 -0.8 -1.6 Protein FecR compare
MPMX19_00472 -0.8 -1.2 Protein HesB, heterocyst compare
MPMX19_02135 -0.8 -3.0 Phage shock protein B compare
MPMX19_01813 -0.8 -6.1 hypothetical protein compare
MPMX19_05825 -0.8 -2.0 hypothetical protein compare
MPMX19_05555 -0.8 -2.9 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX19_02586 -0.8 -4.4 Phosphate import ATP-binding protein PstB compare
MPMX19_00128 -0.8 -5.4 hypothetical protein compare
MPMX19_00576 -0.8 -1.2 hypothetical protein compare
MPMX19_05247 -0.8 -1.8 Molybdenum cofactor guanylyltransferase compare
MPMX19_00904 -0.8 -3.3 DNA repair protein RadA compare
MPMX19_04825 -0.8 -1.3 hypothetical protein compare
MPMX19_04684 -0.8 -2.7 HTH-type transcriptional repressor RspR compare
MPMX19_06964 -0.8 -1.7 HTH-type transcriptional regulator KipR compare
MPMX19_01142 -0.8 -2.6 hypothetical protein compare
MPMX19_01720 -0.8 -1.6 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_01083 -0.8 -2.1 hypothetical protein compare
MPMX19_06009 -0.8 -1.5 hypothetical protein compare
MPMX19_04245 -0.8 -2.6 hypothetical protein compare
MPMX19_05448 -0.8 -1.8 DNA-invertase hin compare
MPMX19_02151 -0.8 -6.1 Long-chain-fatty-acid--CoA ligase compare
MPMX19_01840 -0.8 -3.1 Nif-specific regulatory protein compare
MPMX19_05860 -0.8 -2.8 3-oxoadipate enol-lactonase 2 compare
MPMX19_00572 -0.8 -1.9 Type-4 uracil-DNA glycosylase compare
MPMX19_01189 -0.8 -4.3 hypothetical protein compare
MPMX19_05007 -0.8 -3.3 hypothetical protein compare
MPMX19_06102 -0.8 -1.5 Membrane-bound lytic murein transglycosylase C compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nf_with10percent_fulln experiments