Experiment set2S247 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -3.9 -11.0 Pca regulon regulatory protein compare
MPMX19_00262 -3.2 -4.2 Thiazole synthase compare
MPMX19_00705 -3.0 -6.2 Cell division coordinator CpoB compare
MPMX19_02267 -3.0 -4.0 hypothetical protein compare
MPMX19_02981 -2.8 -7.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01560 -2.7 -5.6 3'-5' exonuclease DinG compare
MPMX19_00128 -2.5 -16.5 hypothetical protein compare
MPMX19_02268 -2.4 -6.7 hypothetical protein compare
MPMX19_02543 -2.3 -3.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_01053 -2.3 -4.6 Dihydroorotase compare
MPMX19_02657 -2.3 -17.1 Glutamate synthase [NADPH] large chain compare
MPMX19_01054 -2.3 -6.7 Aspartate carbamoyltransferase compare
MPMX19_00046 -2.2 -2.4 hypothetical protein compare
MPMX19_02658 -2.2 -12.9 Glutamate synthase [NADPH] small chain compare
MPMX19_06275 -2.1 -13.4 Argininosuccinate lyase compare
MPMX19_01777 -2.0 -8.5 2-aminoadipate transaminase compare
MPMX19_00607 -1.9 -11.2 3-isopropylmalate dehydrogenase compare
MPMX19_05727 -1.8 -7.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00530 -1.8 -2.7 Orotate phosphoribosyltransferase compare
MPMX19_01998 -1.8 -8.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_00606 -1.8 -9.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_00906 -1.8 -9.3 Amidophosphoribosyltransferase compare
MPMX19_01630 -1.8 -4.3 Phosphoribosylamine--glycine ligase compare
MPMX19_06277 -1.8 -10.2 hypothetical protein compare
MPMX19_04087 -1.7 -4.8 Flagellum site-determining protein YlxH compare
MPMX19_01015 -1.7 -1.9 Anthranilate phosphoribosyltransferase compare
MPMX19_01014 -1.6 -1.9 Indole-3-glycerol phosphate synthase compare
MPMX19_02162 -1.6 -11.3 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_01883 -1.6 -3.1 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00693 -1.6 -6.9 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_06050 -1.6 -12.8 Phosphoenolpyruvate carboxylase compare
MPMX19_01364 -1.5 -11.7 O-succinylhomoserine sulfhydrylase compare
MPMX19_01376 -1.5 -1.7 hypothetical protein compare
MPMX19_02207 -1.5 -1.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_01304 -1.5 -6.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_06150 -1.5 -5.1 Corrinoid adenosyltransferase compare
MPMX19_00635 -1.5 -9.6 5,10-methylenetetrahydrofolate reductase compare
MPMX19_05044 -1.5 -2.4 hypothetical protein compare
MPMX19_00126 -1.4 -3.3 hypothetical protein compare
MPMX19_03654 -1.4 -3.0 Fructokinase compare
MPMX19_04391 -1.4 -5.8 Homoserine O-acetyltransferase compare
MPMX19_02123 -1.3 -3.4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_00694 -1.3 -3.5 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_02736 -1.3 -3.5 Tryptophan synthase beta chain compare
MPMX19_00838 -1.3 -3.0 GTP pyrophosphokinase rsh compare
MPMX19_01822 -1.3 -7.1 2-isopropylmalate synthase compare
MPMX19_05119 -1.3 -9.6 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_01084 -1.2 -2.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_06546 -1.2 -2.6 hypothetical protein compare
MPMX19_00652 -1.2 -10.2 Sulfite reductase [ferredoxin] compare
MPMX19_01377 -1.2 -3.0 Outer membrane protein assembly factor BamA compare
MPMX19_02227 -1.2 -9.2 Pyruvate, phosphate dikinase compare
MPMX19_01884 -1.2 -1.4 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_00653 -1.1 -5.3 hypothetical protein compare
MPMX19_00647 -1.1 -8.5 Bifunctional enzyme CysN/CysC compare
MPMX19_00650 -1.1 -6.2 Siroheme synthase compare
MPMX19_00648 -1.1 -6.5 Sulfate adenylyltransferase subunit 2 compare
MPMX19_02675 -1.1 -8.8 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_00148 -1.1 -2.8 hypothetical protein compare
MPMX19_02504 -1.1 -4.0 hypothetical protein compare
MPMX19_02392 -1.0 -8.5 Aspartate/prephenate aminotransferase compare
MPMX19_01249 -1.0 -3.0 Periplasmic serine endoprotease DegP compare
MPMX19_01545 -1.0 -2.6 Lon protease compare
MPMX19_02875 -1.0 -2.8 hypothetical protein compare
MPMX19_04392 -1.0 -2.0 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_02084 -1.0 -1.9 hypothetical protein compare
MPMX19_00912 -1.0 -7.6 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_04985 -1.0 -1.8 HTH-type transcriptional regulator DmlR compare
MPMX19_05534 -1.0 -2.4 DNA gyrase inhibitor YacG compare
MPMX19_01277 -1.0 -4.9 hypothetical protein compare
MPMX19_00718 -1.0 -2.5 hypothetical protein compare
MPMX19_06141 -1.0 -2.4 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_01495 -1.0 -1.7 hypothetical protein compare
MPMX19_06272 -1.0 -1.8 hypothetical protein compare
MPMX19_01918 -1.0 -1.3 tRNA-Ala compare
MPMX19_02320 -1.0 -1.7 HTH-type transcriptional regulator GltR compare
MPMX19_04208 -0.9 -3.2 flagellum biosynthesis repressor protein FlbT compare
MPMX19_02674 -0.9 -2.4 NADH:quinone reductase compare
MPMX19_03197 -0.9 -2.4 hypothetical protein compare
MPMX19_05575 -0.9 -3.0 hypothetical protein compare
MPMX19_00503 -0.9 -3.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_01149 -0.9 -4.4 Polyphosphate kinase compare
MPMX19_02402 -0.9 -1.4 hypothetical protein compare
MPMX19_03819 -0.9 -3.9 NADP-reducing hydrogenase subunit HndA compare
MPMX19_00651 -0.9 -5.1 hypothetical protein compare
MPMX19_06914 -0.9 -1.5 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_04610 -0.9 -2.4 putative enoyl-CoA hydratase 1 compare
MPMX19_05670 -0.9 -5.6 Quinolinate synthase A compare
MPMX19_01714 -0.9 -1.8 tRNA-modifying protein YgfZ compare
MPMX19_05173 -0.9 -3.0 hypothetical protein compare
MPMX19_02664 -0.9 -2.0 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_00260 -0.8 -2.0 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00181 -0.8 -3.3 hypothetical protein compare
MPMX19_05725 -0.8 -2.4 hypothetical protein compare
MPMX19_01012 -0.8 -2.6 Cyclic pyranopterin monophosphate synthase compare
MPMX19_03295 -0.8 -1.9 HTH-type transcriptional regulator McbR compare
MPMX19_00156 -0.8 -3.6 hypothetical protein compare
MPMX19_00170 -0.8 -2.4 hypothetical protein compare
MPMX19_04963 -0.8 -1.7 Cysteine desulfurase IscS compare
MPMX19_05606 -0.8 -2.1 hypothetical protein compare
MPMX19_02551 -0.8 -2.2 hypothetical protein compare
MPMX19_01499 -0.8 -2.5 hypothetical protein compare
MPMX19_03342 -0.8 -1.6 hypothetical protein compare
MPMX19_06567 -0.8 -2.2 hypothetical protein compare
MPMX19_01486 -0.8 -4.4 Flagellar L-ring protein compare
MPMX19_05521 -0.8 -2.8 Nitrogen regulatory protein P-II 2 compare
MPMX19_04687 -0.8 -2.0 Atrazine chlorohydrolase compare
MPMX19_05997 -0.8 -2.1 hypothetical protein compare
MPMX19_05989 -0.8 -2.6 HTH-type transcriptional regulator HdfR compare
MPMX19_01278 -0.8 -4.1 NAD(P) transhydrogenase subunit alpha part 1 compare
MPMX19_04422 -0.8 -3.8 Benzoate--CoA ligase compare
MPMX19_01276 -0.8 -5.3 NAD(P) transhydrogenase subunit beta compare
MPMX19_00649 -0.7 -2.9 Phosphoadenosine phosphosulfate reductase compare
MPMX19_05452 -0.7 -2.9 hypothetical protein compare
MPMX19_06966 -0.7 -2.5 hypothetical protein compare
MPMX19_03948 -0.7 -1.4 tRNA-Ser compare
MPMX19_00862 -0.7 -4.8 hypothetical protein compare
MPMX19_01484 -0.7 -3.4 Flagellar basal-body rod protein FlgG compare
MPMX19_00714 -0.7 -4.1 Ferrous-iron efflux pump FieF compare
MPMX19_02668 -0.7 -4.6 RNA polymerase sigma-54 factor 2 compare
MPMX19_01111 -0.7 -2.1 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_05362 -0.7 -1.7 hypothetical protein compare
MPMX19_06723 -0.7 -2.6 hypothetical protein compare
MPMX19_00858 -0.7 -2.9 Flagellar biosynthetic protein FliP compare
MPMX19_01720 -0.7 -2.4 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_02980 -0.7 -1.2 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_02160 -0.7 -3.5 hypothetical protein compare
MPMX19_04206 -0.7 -2.9 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_02979 -0.7 -2.5 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_05656 -0.7 -1.4 HTH-type transcriptional activator RhaR compare
MPMX19_06001 -0.7 -2.2 hypothetical protein compare
MPMX19_01748 -0.7 -1.8 hypothetical protein compare
MPMX19_04492 -0.7 -1.9 hypothetical protein compare
MPMX19_06985 -0.7 -1.6 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_00144 -0.7 -2.6 hypothetical protein compare
MPMX19_00866 -0.7 -3.8 Flagellar biosynthetic protein FliR compare
MPMX19_04205 -0.7 -2.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04968 -0.7 -1.3 hypothetical protein compare
MPMX19_03634 -0.7 -2.4 Arginase compare
MPMX19_00161 -0.7 -4.8 Putative prophage phiRv2 integrase compare
MPMX19_05459 -0.7 -1.1 hypothetical protein compare
MPMX19_01247 -0.6 -1.6 Transcriptional regulatory protein DegU compare
MPMX19_00134 -0.6 -2.3 hypothetical protein compare
MPMX19_01235 -0.6 -1.5 hypothetical protein compare
MPMX19_03929 -0.6 -2.1 hypothetical protein compare
MPMX19_04898 -0.6 -2.8 Transcriptional regulatory protein LnrK compare
MPMX19_01494 -0.6 -3.9 Flagellar P-ring protein compare
MPMX19_06144 -0.6 -1.7 hypothetical protein compare
MPMX19_01834 -0.6 -1.7 hypothetical protein compare
MPMX19_06327 -0.6 -1.6 hypothetical protein compare
MPMX19_05798 -0.6 -1.5 HTH-type transcriptional repressor NanR compare
MPMX19_03798 -0.6 -2.0 hypothetical protein compare
MPMX19_05678 -0.6 -2.9 hypothetical protein compare
MPMX19_01485 -0.6 -4.3 hypothetical protein compare
MPMX19_05831 -0.6 -1.9 Protein/nucleic acid deglycase 2 compare
MPMX19_05152 -0.6 -1.8 Phosphonoacetaldehyde hydrolase compare
MPMX19_04551 -0.6 -1.3 HTH-type transcriptional repressor RspR compare
MPMX19_00867 -0.6 -5.4 Flagellar biosynthetic protein FlhB compare
MPMX19_04207 -0.6 -2.5 hypothetical protein compare
MPMX19_00634 -0.6 -4.2 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_01483 -0.6 -4.0 Flagellar basal-body rod protein FlgG compare
MPMX19_05679 -0.6 -4.3 Flagellum-specific ATP synthase compare
MPMX19_02177 -0.6 -2.5 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_06309 -0.6 -2.4 hypothetical protein compare
MPMX19_04042 -0.6 -2.2 hypothetical protein compare
MPMX19_02080 -0.6 -2.7 Translation initiation factor IF-3 compare
MPMX19_05448 -0.6 -2.2 DNA-invertase hin compare
MPMX19_01708 -0.6 -1.7 hypothetical protein compare
MPMX19_00136 -0.6 -4.9 hypothetical protein compare
MPMX19_00157 -0.6 -4.9 hypothetical protein compare
MPMX19_03450 -0.6 -0.7 hypothetical protein compare
MPMX19_01119 -0.6 -1.9 hypothetical protein compare
MPMX19_00665 -0.6 -2.1 hypothetical protein compare
MPMX19_04861 -0.6 -1.6 hypothetical protein compare
MPMX19_04996 -0.6 -1.5 hypothetical protein compare
MPMX19_02248 -0.6 -2.2 hypothetical protein compare
MPMX19_00432 -0.6 -2.3 hypothetical protein compare
MPMX19_06795 -0.6 -1.5 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_05680 -0.6 -2.5 Cell cycle response regulator CtrA compare
MPMX19_02539 -0.6 -2.2 hypothetical protein compare
MPMX19_03335 -0.6 -1.2 hypothetical protein compare
MPMX19_01314 -0.6 -2.7 hypothetical protein compare
MPMX19_01475 -0.6 -2.6 hypothetical protein compare
MPMX19_06044 -0.6 -1.1 hypothetical protein compare
MPMX19_05207 -0.6 -1.1 Hemolysin secretion protein D, plasmid compare
MPMX19_05519 -0.6 -3.8 LL-diaminopimelate aminotransferase compare
MPMX19_03939 -0.6 -1.8 Enoyl-CoA-hydratase compare
MPMX19_00138 -0.6 -3.7 hypothetical protein compare
MPMX19_03653 -0.6 -3.5 Mannitol 2-dehydrogenase compare
MPMX19_01559 -0.6 -2.5 hypothetical protein compare
MPMX19_04462 -0.6 -1.9 Thiamine-phosphate synthase compare
MPMX19_04474 -0.6 -2.2 hypothetical protein compare
MPMX19_02180 -0.6 -1.8 hypothetical protein compare
MPMX19_01729 -0.6 -1.8 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_06255 -0.6 -2.5 hypothetical protein compare
MPMX19_03048 -0.6 -2.0 hypothetical protein compare
MPMX19_04647 -0.6 -1.1 hypothetical protein compare
MPMX19_05388 -0.5 -2.3 Leucine-responsive regulatory protein compare
MPMX19_03038 -0.5 -1.8 hypothetical protein compare
MPMX19_00663 -0.5 -2.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments