Experiment set2S24 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:PBS;Temp:28;Samp:16-3

200 most important genes:

  gene name fitness t score description  
OLJFJH_06130 -6.2 -19.3 argininosuccinate lyase compare
OLJFJH_12050 -6.2 -2.4 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_06120 -6.2 -3.1 acetylglutamate kinase compare
OLJFJH_12075 -6.0 -12.8 Amylovoran biosynthesis protein AmsL compare
OLJFJH_15175 -5.9 -13.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_04030 -5.7 -14.3 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_10645 -5.7 -3.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_06125 -5.7 -12.1 argininosuccinate synthase compare
OLJFJH_17635 -5.6 -10.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_06115 -5.6 -11.4 acetylornithine deacetylase compare
OLJFJH_01400 -5.6 -10.0 carbamoyl phosphate synthase small subunit compare
OLJFJH_07335 -5.5 -14.8 ornithine carbamoyltransferase compare
OLJFJH_05615 -5.5 -1.9 Conserved uncharacterized protein compare
OLJFJH_12040 -5.4 -7.3 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_12070 -5.3 -8.1 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_09115 -5.2 -11.5 amino-acid N-acetyltransferase compare
OLJFJH_08880 -5.1 -9.7 diaminopimelate decarboxylase compare
OLJFJH_11280 -4.9 -13.8 amidophosphoribosyltransferase compare
OLJFJH_17720 -4.8 -7.9 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_01395 -4.7 -14.4 carbamoyl-phosphate synthase large subunit compare
OLJFJH_10305 -4.7 -16.5 phosphoribosylformylglycinamidine synthase compare
OLJFJH_10590 -4.6 -7.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_06785 -4.6 -17.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_06780 -4.4 -15.7 phosphoribosylamine--glycine ligase compare
OLJFJH_06480 -4.3 -17.3 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_12045 -4.2 -1.6 Amylovoran biosynthesis protein AmsC compare
OLJFJH_12065 -4.2 -10.1 colanic acid biosynthesis pyruvyl transferase WcaK compare
OLJFJH_13350 -4.0 -5.4 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_06105 -4.0 -13.3 methylenetetrahydrofolate reductase compare
OLJFJH_18380 -3.8 -0.7 anti-adapter protein IraP compare
OLJFJH_06475 -3.8 -7.0 HTH-type transcriptional regulator MetR compare
OLJFJH_01485 -3.5 -10.9 threonine synthase compare
OLJFJH_12035 -3.4 -23.2 Putative tyrosine-protein kinase AmsA compare
OLJFJH_06535 -3.4 -6.5 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_13355 -3.3 -8.2 4-oxalmesaconate hydratase compare
OLJFJH_12165 -3.3 -5.8 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_12025 -3.2 -10.3 Amylovoran export outer membrane protein AmsH compare
OLJFJH_12160 -3.2 -0.8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_10215 -3.2 -6.7 RNA polymerase sigma factor RpoE compare
OLJFJH_01295 -3.2 -14.7 3-isopropylmalate dehydratase large subunit compare
OLJFJH_12030 -3.2 -12.7 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OLJFJH_15990 -3.1 -7.9 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_10500 -3.1 -3.0 IMP dehydrogenase compare
OLJFJH_01300 -3.1 -3.4 3-isopropylmalate dehydratase small subunit compare
OLJFJH_10855 -3.1 -13.4 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_17630 -3.1 -1.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_07330 -3.1 -12.5 aspartate carbamoyltransferase compare
OLJFJH_05770 -3.0 -3.9 orotate phosphoribosyltransferase compare
OLJFJH_13345 -3.0 -2.6 4-oxalomesaconate tautomerase compare
OLJFJH_15515 -3.0 -5.6 aminodeoxychorismate lyase compare
OLJFJH_13120 -2.9 -1.6 septum site-determining protein MinC compare
OLJFJH_15720 -2.9 -14.7 glucan biosynthesis glucosyltransferase H compare
OLJFJH_05495 -2.9 -9.7 nitrogen regulation protein NR(I) compare
OLJFJH_13475 -2.9 -15.1 tryptophan synthase subunit beta compare
OLJFJH_01290 -2.8 -20.4 3-isopropylmalate dehydrogenase compare
OLJFJH_12180 -2.8 -16.5 histidinol dehydrogenase compare
OLJFJH_03580 -2.8 -0.8 transcriptional repressor LexA compare
OLJFJH_06995 -2.8 -2.5 Z-ring associated protein ZapG compare
OLJFJH_15670 -2.7 -6.0 dihydroorotase compare
OLJFJH_17775 -2.7 -11.0 EamA-like transporter family compare
OLJFJH_06095 -2.7 -10.1 cystathionine gamma-synthase compare
OLJFJH_16950 -2.7 -1.6 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_13470 -2.7 -10.3 tryptophan synthase subunit alpha compare
OLJFJH_12170 -2.7 -4.8 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_16955 -2.7 -2.5 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_12175 -2.6 -8.9 histidinol-phosphate transaminase compare
OLJFJH_12155 -2.6 -5.7 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_16940 -2.5 -8.0 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_13570 -2.5 -8.0 orotidine-5'-phosphate decarboxylase compare
OLJFJH_07070 -2.5 -8.9 RNA polymerase factor sigma-54 compare
OLJFJH_15725 -2.5 -6.5 glucan biosynthesis protein G compare
OLJFJH_16980 -2.5 -13.0 citrate synthase compare
OLJFJH_17880 -2.4 -1.4 transcriptional regulator compare
OLJFJH_02090 -2.4 -8.5 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_08875 -2.4 -8.1 LysR family transcriptional regulator compare
OLJFJH_16935 -2.4 -9.6 succinate--CoA ligase subunit alpha compare
OLJFJH_10860 -2.4 -1.6 phosphocarrier protein Hpr compare
OLJFJH_11230 -2.3 -2.9 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_06225 -2.3 -12.9 branched-chain-amino-acid transaminase compare
OLJFJH_01595 -2.3 -3.3 phosphoserine phosphatase compare
OLJFJH_17090 -2.3 -2.6 N-acetylglucosamine-6-phosphate deacetylase compare
OLJFJH_03650 -2.3 -12.0 homoserine O-succinyltransferase compare
OLJFJH_03945 -2.3 -0.8 peptidylprolyl isomerase compare
OLJFJH_12965 -2.2 -1.3 Lysine exporter LysO compare
OLJFJH_01490 -2.2 -7.4 homoserine kinase compare
OLJFJH_05500 -2.2 -8.5 nitrogen regulation protein NR(II) compare
OLJFJH_12105 -2.2 -2.2 ABC transporter permease compare
OLJFJH_09390 -2.2 -0.5 Transposase compare
OLJFJH_11455 -2.2 -0.7 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_09105 -2.1 -2.9 exodeoxyribonuclease V subunit alpha compare
OLJFJH_12150 -2.1 -3.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_08835 -2.1 -2.5 site-specific tyrosine recombinase XerD compare
OLJFJH_10700 -2.1 -0.8 type IV secretion protein Rhs compare
OLJFJH_15060 -2.1 -0.7 type III secretion system protein compare
OLJFJH_05470 -2.1 -1.0 DNA polymerase I compare
OLJFJH_08795 -2.0 -8.3 hydrolase compare
OLJFJH_12130 -2.0 -1.3 glycosyltransferase family 1 protein compare
OLJFJH_13485 -2.0 -4.1 Anthranilate phosphoribosyltransferase compare
OLJFJH_05955 -2.0 -8.9 6-phosphofructokinase compare
OLJFJH_06245 -1.9 -14.1 ketol-acid reductoisomerase compare
OLJFJH_01370 -1.9 -1.9 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_11440 -1.9 -3.4 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_13480 -1.9 -5.0 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_06985 -1.8 -10.4 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_11595 -1.8 -4.5 FAD:protein FMN transferase ApbE compare
OLJFJH_01285 -1.8 -10.0 2-isopropylmalate synthase compare
OLJFJH_11425 -1.8 -1.8 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_07820 -1.8 -12.2 cystathionine beta-lyase compare
OLJFJH_06415 -1.8 -4.7 tyrosine recombinase XerC compare
OLJFJH_13495 -1.8 -10.7 anthranilate synthase component 1 compare
OLJFJH_09445 -1.8 -1.0 AraC family transcriptional regulator compare
OLJFJH_06640 -1.8 -2.5 elongation factor Tu compare
OLJFJH_06230 -1.8 -11.6 dihydroxy-acid dehydratase compare
OLJFJH_05630 -1.7 -0.8 sce7726 family protein compare
OLJFJH_12125 -1.7 -2.3 glycosyl transferase compare
OLJFJH_09375 -1.7 -6.5 murein hydrolase activator NlpD compare
OLJFJH_03535 -1.7 -0.7 hypothetical protein compare
OLJFJH_03260 -1.7 -7.8 translation factor (SUA5) compare
OLJFJH_14370 -1.6 -1.0 electron transport complex subunit RsxC compare
OLJFJH_01350 -1.6 -3.2 co-chaperone DjlA compare
OLJFJH_05910 -1.6 -6.8 protein-export chaperone SecB compare
OLJFJH_05870 -1.6 -5.7 lipopolysaccharide biosynthesis protein compare
OLJFJH_11930 -1.6 -5.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_16960 -1.6 -5.4 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_13490 -1.6 -2.0 anthranilate synthase component II compare
OLJFJH_18020 -1.6 -2.7 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_04080 -1.6 -2.6 adenine-specific DNA-methyltransferase compare
OLJFJH_09310 -1.6 -5.2 phosphoadenylyl-sulfate reductase compare
OLJFJH_06735 -1.6 -8.4 thiamine phosphate synthase compare
OLJFJH_07675 -1.6 -7.7 outer membrane channel protein TolC compare
OLJFJH_13980 -1.6 -0.6 hypothetical protein compare
OLJFJH_13645 -1.6 -5.7 peptide ABC transporter ATP-binding protein SapD compare
OLJFJH_07060 -1.5 -3.2 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_03725 -1.5 -9.3 Trk system potassium transporter TrkA compare
OLJFJH_14450 -1.5 -4.6 transcriptional regulator SlyA compare
OLJFJH_14950 -1.5 -5.6 redox-regulated ATPase YchF compare
OLJFJH_15015 -1.5 -1.3 Type III flagellar switch regulator (C-ring) FliN C-term compare
OLJFJH_17040 -1.5 -1.1 replication initiation negative regulator SeqA compare
OLJFJH_11445 -1.5 -2.1 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_04160 -1.5 -3.0 two-component system response regulator OmpR compare
OLJFJH_05635 -1.5 -1.3 beta family protein compare
OLJFJH_16040 -1.5 -7.5 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_08305 -1.5 -0.6 hypothetical protein compare
OLJFJH_18015 -1.4 -3.2 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_08750 -1.4 -2.0 cell division protein ZapA compare
OLJFJH_08365 -1.4 -2.5 hypothetical protein compare
OLJFJH_07350 -1.4 -0.9 hypothetical protein compare
OLJFJH_13115 -1.4 -1.8 septum site-determining protein MinD compare
OLJFJH_12885 -1.4 -4.9 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_12185 -1.4 -4.5 ATP phosphoribosyltransferase compare
OLJFJH_05730 -1.4 -0.4 hypothetical protein compare
OLJFJH_09575 -1.4 -2.5 recombinase RecA compare
OLJFJH_10515 -1.4 -0.8 hypothetical protein compare
OLJFJH_16805 -1.4 -0.6 multidrug efflux pump-associated protein AcrZ family compare
OLJFJH_13240 -1.3 -3.3 asparaginase compare
OLJFJH_13885 -1.3 -2.2 hypothetical protein compare
OLJFJH_05860 -1.3 -3.3 glycosyl transferase compare
OLJFJH_10685 -1.3 -0.8 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_08735 -1.3 -4.6 phosphoglycerate dehydrogenase compare
OLJFJH_06740 -1.3 -7.9 phosphomethylpyrimidine synthase ThiC compare
OLJFJH_13340 -1.3 -3.5 6-phosphogluconate dehydrogenase compare
OLJFJH_05835 -1.3 -3.0 glycosyl transferase compare
OLJFJH_15865 -1.3 -0.8 hypothetical protein compare
OLJFJH_16180 -1.3 -3.9 cell division protein FtsK compare
OLJFJH_11925 -1.3 -1.2 hydroxyethylthiazole kinase compare
OLJFJH_05915 -1.3 -6.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
OLJFJH_05850 -1.3 -6.0 deacetylase compare
OLJFJH_15000 -1.3 -0.4 type III secretion system export apparatus subunit SctT compare
OLJFJH_10850 -1.3 -1.8 PTS glucose transporter subunit IIA compare
OLJFJH_05040 -1.3 -8.7 aspartate aminotransferase family protein compare
OLJFJH_09965 -1.3 -0.6 flagellar biosynthetic protein FliO compare
OLJFJH_11420 -1.3 -4.7 NADH-quinone oxidoreductase subunit C/D compare
OLJFJH_10485 -1.2 -3.3 Emfourin compare
OLJFJH_04735 -1.2 -3.5 protease compare
OLJFJH_09065 -1.2 -0.7 thymidylate synthase compare
OLJFJH_10220 -1.2 -0.4 anti-sigma-E factor RseA compare
OLJFJH_01895 -1.2 -3.7 type VI secretion system baseplate subunit TssK compare
OLJFJH_11625 -1.2 -2.5 Conserved uncharacterized protein compare
OLJFJH_05665 -1.2 -1.5 hypothetical protein compare
OLJFJH_04370 -1.2 -3.4 permease-like cell division protein FtsX compare
OLJFJH_16900 -1.2 -3.2 cell division protein CpoB compare
OLJFJH_03025 -1.2 -1.0 type VI secretion system tip protein VgrG compare
OLJFJH_10230 -1.2 -2.7 SoxR-reducing system protein RseC compare
OLJFJH_05310 -1.2 -0.9 F0F1 ATP synthase subunit I compare
OLJFJH_02410 -1.2 -2.7 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_10585 -1.2 -6.5 phosphoribosylglycinamide formyltransferase compare
OLJFJH_12870 -1.2 -0.7 zinc ABC transporter ATP-binding protein ZnuC compare
OLJFJH_01495 -1.2 -6.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
OLJFJH_06975 -1.2 -1.8 transcriptional regulator ArgR compare
OLJFJH_12110 -1.2 -1.2 sugar ABC transporter ATP-binding protein compare
OLJFJH_07285 -1.2 -6.3 GNAT family N-acetyltransferase compare
OLJFJH_06545 -1.2 -2.3 NAD(P)H-flavin reductase compare
OLJFJH_10720 -1.1 -0.7 Uncharacterised protein family (UPF0370) compare
OLJFJH_15450 -1.1 -4.3 Glycine zipper 2TM domain-containing protein compare
OLJFJH_16190 -1.1 -4.6 thioredoxin-disulfide reductase compare
OLJFJH_14045 -1.1 -1.6 transcriptional regulator compare
OLJFJH_15555 -1.1 -0.9 23S rRNA accumulation protein YceD compare
OLJFJH_13940 -1.1 -2.1 Glyco-hydro-32N domain-containing protein compare
OLJFJH_10430 -1.1 -0.9 nucleoside-diphosphate kinase compare
OLJFJH_08615 -1.1 -0.8 putative double-glycine leader peptidase C39-like (CLD) domain compare


Specific Phenotypes

For 1 genes in this experiment