Experiment set2S24 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Inosine 0.3728 mM carbon source

200 most important genes:

  gene name fitness t score description  
A4249_RS00270 -4.7 -3.2 very short patch repair endonuclease compare
A4249_RS10390 -2.0 -2.4 translation elongation factor 4 compare
A4249_RS07610 -1.7 -1.7 methyltransferase type 11 compare
A4249_RS08300 -1.4 -1.6 cold-shock protein compare
A4249_RS06665 -1.4 -1.9 endonuclease/exonuclease/phosphatase family protein compare
A4249_RS08855 -1.3 -2.3 L,D-transpeptidase family protein compare
A4249_RS14360 -1.3 -2.6 pilus assembly protein compare
A4249_RS14255 -1.3 -1.3 ribonuclease P protein component compare
A4249_RS16585 -1.3 -2.5 hypothetical protein compare
A4249_RS09255 -1.3 -0.8 phosphoribosylamine--glycine ligase compare
A4249_RS04080 -1.3 -3.4 M48 family metalloprotease compare
A4249_RS01460 -1.3 -1.5 signal peptide peptidase SppA compare
A4249_RS14065 -1.2 -2.9 MFS transporter compare
A4249_RS08535 -1.2 -1.6 flagellar assembly protein FliX compare
A4249_RS02325 -1.2 -1.4 23S ribosomal RNA compare
A4249_RS12795 -1.2 -1.4 DsbE family thiol:disulfide interchange protein compare
A4249_RS16460 -1.2 -1.6 hypothetical protein compare
A4249_RS04485 -1.2 -1.4 phage holin family protein compare
A4249_RS07995 -1.1 -1.5 type II 3-dehydroquinate dehydratase compare
A4249_RS08510 -1.1 -2.6 hypothetical protein compare
A4249_RS00605 -1.1 -1.8 host attachment protein compare
A4249_RS13190 -1.1 -2.6 2-oxo acid dehydrogenase subunit E2 compare
A4249_RS09035 -1.1 -1.5 redox-regulated ATPase YchF compare
A4249_RS14905 -1.1 -1.8 phosphonate ABC transporter ATP-binding protein compare
A4249_RS07195 -1.1 -1.1 hypothetical protein compare
A4249_RS10785 -1.1 -1.5 hypothetical protein compare
A4249_RS06230 -1.0 -1.4 OmpH family outer membrane protein compare
A4249_RS08865 -1.0 -2.0 DUF1192 domain-containing protein compare
A4249_RS11285 -1.0 -2.4 double-strand break repair protein AddB compare
A4249_RS15225 -1.0 -1.8 flagellar biosynthesis protein FliQ compare
A4249_RS04200 -1.0 -2.9 pseudouridine synthase compare
A4249_RS14875 -1.0 -2.0 benzoate/H(+) symporter BenE family transporter compare
A4249_RS07200 -0.9 -2.1 hypothetical protein compare
A4249_RS03170 -0.9 -0.9 hypothetical protein compare
A4249_RS10835 -0.9 -2.6 c-type cytochrome biogenesis protein CcmI compare
A4249_RS03645 -0.9 -3.5 TonB-dependent receptor compare
A4249_RS12970 -0.9 -3.0 glycosyltransferase family 61 protein compare
A4249_RS16570 -0.9 -2.9 hypothetical protein compare
A4249_RS16710 -0.8 -1.2 hypothetical protein compare
A4249_RS02650 -0.8 -1.6 hypothetical protein compare
A4249_RS14205 -0.8 -1.5 response regulator compare
A4249_RS04345 -0.8 -2.1 glycosyltransferase family A protein compare
A4249_RS12830 -0.8 -1.8 YkvA family protein compare
A4249_RS12755 -0.8 -1.5 hydrogen peroxide-inducible genes activator compare
A4249_RS07015 -0.8 -1.4 hypothetical protein compare
A4249_RS10245 -0.8 -2.4 MucR family transcriptional regulator compare
A4249_RS00050 -0.8 -1.2 type 1 glutamine amidotransferase compare
A4249_RS06855 -0.8 -2.1 hypothetical protein compare
A4249_RS09265 -0.8 -1.3 exodeoxyribonuclease VII large subunit compare
A4249_RS16300 -0.8 -1.6 DUF3606 domain-containing protein compare
A4249_RS06325 -0.8 -2.1 ribonuclease J compare
A4249_RS16165 -0.7 -2.0 homoserine O-succinyltransferase compare
A4249_RS09115 -0.7 -1.5 sigma-54 dependent transcriptional regulator compare
A4249_RS05620 -0.7 -3.2 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
A4249_RS11125 -0.7 -4.2 glycosyltransferase family 9 protein compare
A4249_RS06165 -0.7 -2.6 aminodeoxychorismate/anthranilate synthase component II compare
A4249_RS16150 -0.7 -1.5 hypothetical protein compare
A4249_RS06690 -0.7 -1.2 DUF423 domain-containing protein compare
A4249_RS00925 -0.7 -1.5 multidrug efflux SMR transporter compare
A4249_RS07320 -0.7 -1.2 hypothetical protein compare
A4249_RS04490 -0.7 -1.4 cobaltochelatase subunit CobS compare
A4249_RS10430 -0.7 -3.1 S1/P1 Nuclease compare
A4249_RS07920 -0.7 -2.8 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS12425 -0.7 -1.6 Smr/MutS family protein compare
A4249_RS10125 -0.7 -1.4 phage major tail protein, TP901-1 family compare
A4249_RS09605 -0.7 -1.1 DUF6468 domain-containing protein compare
A4249_RS13560 -0.7 -1.4 glutaredoxin 3 compare
A4249_RS15755 -0.7 -2.1 amino acid racemase compare
A4249_RS14835 -0.7 -2.7 S41 family peptidase compare
A4249_RS01120 -0.7 -1.3 uracil-DNA glycosylase compare
A4249_RS14840 -0.7 -2.2 carboxynorspermidine decarboxylase compare
A4249_RS09275 -0.6 -2.2 DUF3035 domain-containing protein compare
A4249_RS10115 -0.6 -1.6 phage tail tape measure protein compare
A4249_RS16950 -0.6 -1.6 flavin reductase family protein compare
A4249_RS00395 -0.6 -1.9 DUF2975 domain-containing protein compare
A4249_RS01285 -0.6 -1.8 head decoration protein compare
A4249_RS13125 -0.6 -1.2 ribonuclease PH compare
A4249_RS15560 -0.6 -0.8 response regulator compare
A4249_RS02720 -0.6 -2.9 hypothetical protein compare
A4249_RS05625 -0.6 -4.8 ADP-glyceromanno-heptose 6-epimerase compare
A4249_RS11560 -0.6 -0.7 peroxiredoxin compare
A4249_RS02905 -0.6 -1.0 tRNA guanosine(34) transglycosylase Tgt compare
A4249_RS14695 -0.6 -1.9 transcription elongation factor GreA compare
A4249_RS04615 -0.6 -2.2 DEAD/DEAH box helicase compare
A4249_RS08025 -0.6 -1.1 DUF2155 domain-containing protein compare
A4249_RS15150 -0.6 -1.2 hypothetical protein compare
A4249_RS12030 -0.6 -2.1 prepilin peptidase compare
A4249_RS06560 -0.6 -2.6 amino acid permease compare
A4249_RS07185 -0.6 -2.4 hypothetical protein compare
A4249_RS12085 -0.6 -1.0 DUF883 family protein compare
A4249_RS14230 -0.6 -1.3 hypothetical protein compare
A4249_RS01415 -0.6 -0.9 phage Gp37/Gp68 family protein compare
A4249_RS05365 -0.6 -2.1 SemiSWEET transporter compare
A4249_RS16455 -0.6 -0.7 helix-turn-helix transcriptional regulator compare
A4249_RS06510 -0.6 -1.9 hypothetical protein compare
A4249_RS03455 -0.5 -2.6 cysteine hydrolase compare
A4249_RS15645 -0.5 -1.9 potassium-transporting ATPase subunit KdpB compare
A4249_RS02255 -0.5 -1.2 DUF2093 domain-containing protein compare
A4249_RS07115 -0.5 -1.7 hypothetical protein compare
A4249_RS03265 -0.5 -2.1 metal-sensitive transcriptional regulator compare
A4249_RS15595 -0.5 -1.9 hypothetical protein compare
A4249_RS16615 -0.5 -0.9 hypothetical protein compare
A4249_RS15820 -0.5 -1.4 arsenate reductase (glutaredoxin) compare
A4249_RS11290 -0.5 -1.2 double-strand break repair helicase AddA compare
A4249_RS09075 -0.5 -1.1 hypothetical protein compare
A4249_RS05285 -0.5 -2.0 hypothetical protein compare
A4249_RS15865 -0.5 -0.8 Holliday junction branch migration DNA helicase RuvB compare
A4249_RS02485 -0.5 -1.6 methylmalonyl-CoA mutase family protein compare
A4249_RS00145 -0.5 -0.8 SURF1 family protein compare
A4249_RS13960 -0.5 -0.5 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB compare
A4249_RS09765 -0.5 -2.1 sigma-54 dependent transcriptional regulator compare
A4249_RS10060 -0.5 -2.3 RluA family pseudouridine synthase compare
A4249_RS09090 -0.5 -0.7 hypothetical protein compare
A4249_RS10095 -0.5 -0.5 NlpC/P60 family protein compare
A4249_RS00440 -0.5 -1.1 hypothetical protein compare
A4249_RS02675 -0.5 -1.7 N-acetyltransferase compare
A4249_RS11740 -0.5 -2.2 isoprenylcysteine carboxylmethyltransferase family protein compare
A4249_RS00305 -0.5 -1.1 DUF4908 domain-containing protein compare
A4249_RS13850 -0.5 -1.3 twin transmembrane helix small protein compare
A4249_RS16365 -0.5 -2.1 DUF393 domain-containing protein compare
A4249_RS15050 -0.5 -1.8 lysozyme inhibitor LprI family protein compare
A4249_RS00170 -0.5 -0.5 TetR/AcrR family transcriptional regulator compare
A4249_RS03370 -0.5 -0.5 copper-binding protein compare
A4249_RS11645 -0.5 -1.9 helix-turn-helix domain-containing protein compare
A4249_RS14895 -0.5 -1.1 phosphonate ABC transporter, permease protein PhnE compare
A4249_RS07000 -0.5 -1.8 hypothetical protein compare
A4249_RS00275 -0.5 -1.7 ATP-binding protein compare
A4249_RS10085 -0.5 -2.1 DnaJ C-terminal domain-containing protein compare
A4249_RS07940 -0.5 -1.5 hypothetical protein compare
A4249_RS03065 -0.5 -1.2 arsenate reductase (glutaredoxin) compare
A4249_RS14515 -0.5 -3.5 enoyl-CoA hydratase-related protein compare
A4249_RS09510 -0.5 -1.9 ribonuclease HII compare
A4249_RS12170 -0.5 -2.2 hypothetical protein compare
A4249_RS12215 -0.5 -1.6 hypothetical protein compare
A4249_RS01125 -0.5 -1.6 hypothetical protein compare
A4249_RS10200 -0.5 -1.6 YcgN family cysteine cluster protein compare
A4249_RS10110 -0.5 -0.9 DUF805 domain-containing protein compare
A4249_RS07205 -0.4 -2.6 hypothetical protein compare
A4249_RS13460 -0.4 -1.7 S-type pyocin family protein compare
A4249_RS12455 -0.4 -1.0 hypothetical protein compare
A4249_RS06780 -0.4 -0.8 YicC family protein compare
A4249_RS06525 -0.4 -0.6 SCP2 sterol-binding domain-containing protein compare
A4249_RS15980 -0.4 -1.6 multidrug efflux SMR transporter compare
A4249_RS16470 -0.4 -2.4 hypothetical protein compare
A4249_RS05915 -0.4 -2.5 peptide-methionine (R)-S-oxide reductase MsrB compare
A4249_RS08040 -0.4 -1.0 pentapeptide repeat-containing protein compare
A4249_RS08580 -0.4 -1.9 hypothetical protein compare
A4249_RS11800 -0.4 -1.6 DUF3363 domain-containing protein compare
A4249_RS03570 -0.4 -1.1 TonB family protein compare
A4249_RS14865 -0.4 -2.4 glutathione S-transferase N-terminal domain-containing protein compare
A4249_RS12400 -0.4 -0.5 hypothetical protein compare
A4249_RS05640 -0.4 -1.5 NfeD family protein compare
A4249_RS08285 -0.4 -0.9 preQ(1) synthase compare
A4249_RS02185 -0.4 -2.5 polysaccharide biosynthesis tyrosine autokinase compare
A4249_RS07560 -0.4 -1.5 hypothetical protein compare
A4249_RS14950 -0.4 -1.0 ParD-like family protein compare
A4249_RS04635 -0.4 -3.3 cyclic nucleotide-binding domain-containing protein compare
A4249_RS12390 -0.4 -1.2 ATP-dependent protease subunit HslV compare
A4249_RS12915 -0.4 -0.9 hypothetical protein compare
A4249_RS01965 -0.4 -1.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
A4249_RS09285 -0.4 -1.5 Tat pathway signal sequence domain protein compare
A4249_RS06680 -0.4 -0.8 tipN compare
A4249_RS12615 -0.4 -1.3 recombinase RecA compare
A4249_RS05220 -0.4 -1.9 hypothetical protein compare
A4249_RS12140 -0.4 -1.4 ATP-binding protein compare
A4249_RS16280 -0.4 -1.5 general stress protein compare
A4249_RS11365 -0.4 -0.8 cation diffusion facilitator family transporter compare
A4249_RS01905 -0.4 -0.6 TrbC/VirB2 family protein compare
A4249_RS07705 -0.4 -2.3 SDR family NAD(P)-dependent oxidoreductase compare
A4249_RS10990 -0.4 -0.8 ATP-dependent protease ATPase subunit HslU compare
A4249_RS12510 -0.4 -2.3 phosphoenolpyruvate carboxylase compare
A4249_RS09355 -0.4 -1.4 hypothetical protein compare
A4249_RS13545 -0.4 -0.8 Flp family type IVb pilin compare
A4249_RS08555 -0.4 -2.4 EAL domain-containing protein compare
A4249_RS00950 -0.4 -1.5 tetratricopeptide repeat protein compare
A4249_RS12870 -0.4 -1.3 DUF6356 family protein compare
A4249_RS05750 -0.4 -1.7 helix-turn-helix transcriptional regulator compare
A4249_RS07395 -0.4 -0.8 hypothetical protein compare
A4249_RS15265 -0.4 -1.6 hypothetical protein compare
A4249_RS11180 -0.4 -1.0 YqaA family protein compare
A4249_RS15850 -0.4 -1.1 MgtC/SapB family protein compare
A4249_RS09350 -0.4 -0.9 PGPGW domain-containing protein compare
A4249_RS01815 -0.4 -1.3 DNA mismatch endonuclease Vsr compare
A4249_RS10375 -0.4 -1.6 DUF1491 family protein compare
A4249_RS06565 -0.4 -1.5 tRNA-Lys compare
A4249_RS04835 -0.4 -1.7 GTPase HflX compare
A4249_RS02755 -0.4 -2.4 flagellin compare
A4249_RS01725 -0.4 -0.6 hypothetical protein compare
A4249_RS03420 -0.4 -1.3 alpha-ketoglutarate-dependent dioxygenase AlkB compare
A4249_RS13195 -0.4 -1.2 alpha-ketoacid dehydrogenase subunit beta compare
A4249_RS07900 -0.4 -1.3 Do family serine endopeptidase compare
A4249_RS13185 -0.4 -1.0 dihydrolipoyl dehydrogenase compare
A4249_RS05555 -0.4 -1.5 DNA repair protein RecO compare
A4249_RS05715 -0.4 -0.7 hypothetical protein compare
A4249_RS10720 -0.4 -1.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
A4249_RS01145 -0.4 -1.9 OsmC family protein compare
A4249_RS14390 -0.3 -1.5 DNA cytosine methyltransferase compare
A4249_RS04510 -0.3 -1.7 polymer-forming cytoskeletal protein compare
A4249_RS10840 -0.3 -1.4 hypothetical protein compare
A4249_RS12855 -0.3 -1.5 serine protease compare


Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Inosine across organisms