Experiment set2S24 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Inosine 0.3728 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
A4249_RS10710 +1.4 1.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
A4249_RS14680 +1.4 3.4 PAS domain-containing sensor histidine kinase compare
A4249_RS05505 +1.0 4.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
A4249_RS02645 +1.0 1.8 cobalamin biosynthesis protein CbiG compare
A4249_RS00290 +1.0 0.7 histidine phosphatase family protein compare
A4249_RS11780 +1.0 1.7 hypothetical protein compare
A4249_RS14060 +0.9 1.7 YidB family protein compare
A4249_RS07060 +0.9 2.1 single-stranded DNA-binding protein compare
A4249_RS10360 +0.9 1.8 HAMP domain-containing sensor histidine kinase compare
A4249_RS06440 +0.9 5.7 glycosyltransferase compare
A4249_RS14510 +0.8 1.2 hypothetical protein compare
A4249_RS10550 +0.8 1.6 winged helix-turn-helix transcriptional regulator compare
A4249_RS17075 +0.8 1.4 energy transducer TonB compare
A4249_RS10105 +0.8 0.9 DUF2460 domain-containing protein compare
A4249_RS10820 +0.8 2.0 cytochrome c-type biogenesis protein CcmH compare
A4249_RS07305 +0.8 2.2 UPF0262 family protein compare
A4249_RS12480 +0.8 6.7 alpha/beta hydrolase compare
A4249_RS00980 +0.8 7.3 pyruvate, phosphate dikinase compare
A4249_RS08495 +0.8 1.6 Na+/H+ antiporter subunit E compare
A4249_RS06970 +0.7 2.4 hypothetical protein compare
A4249_RS11930 +0.7 2.6 YcxB family protein compare
A4249_RS01675 +0.7 2.6 DMT family transporter compare
A4249_RS17005 +0.7 1.8 glucokinase compare
A4249_RS15455 +0.7 1.7 Rieske (2Fe-2S) protein compare
A4249_RS05900 +0.7 1.8 hypothetical protein compare
A4249_RS08515 +0.7 4.4 TIGR00730 family Rossman fold protein compare
A4249_RS02725 +0.7 2.7 hypothetical protein compare
A4249_RS14585 +0.7 3.9 glucose-6-phosphate isomerase compare
A4249_RS07470 +0.7 1.1 hypothetical protein compare
A4249_RS08590 +0.7 3.6 MlaD family protein compare
A4249_RS13640 +0.7 1.7 molecular chaperone DnaJ compare
A4249_RS12200 +0.6 3.7 fructose-6-phosphate aldolase compare
A4249_RS00895 +0.6 1.1 DUF1476 domain-containing protein compare
A4249_RS08595 +0.6 2.5 ABC transporter ATP-binding protein compare
A4249_RS05035 +0.6 1.9 Mrp/NBP35 family ATP-binding protein compare
A4249_RS04450 +0.6 1.7 cytochrome o ubiquinol oxidase subunit I compare
A4249_RS02855 +0.6 1.8 hydrolase compare
A4249_RS10425 +0.6 3.6 RNA methyltransferase compare
A4249_RS14485 +0.6 2.1 phosphoenolpyruvate--protein phosphotransferase compare
A4249_RS13175 +0.6 1.3 Rrf2 family transcriptional regulator compare
A4249_RS02220 +0.6 2.0 MaoC family dehydratase compare
A4249_RS10865 +0.6 0.7 hypothetical protein compare
A4249_RS14135 +0.6 1.2 ATP-binding protein compare
A4249_RS14785 +0.6 5.7 response regulator compare
A4249_RS08440 +0.6 0.9 TlyA family RNA methyltransferase compare
A4249_RS17010 +0.6 4.1 glucokinase compare
A4249_RS16425 +0.6 0.8 hypothetical protein compare
A4249_RS15765 +0.6 3.5 ribokinase compare
A4249_RS01650 +0.6 1.1 DUF1289 domain-containing protein compare
A4249_RS08785 +0.6 2.4 DnaJ C-terminal domain-containing protein compare
A4249_RS14970 +0.5 2.1 phasin compare
A4249_RS04785 +0.5 3.9 YihY/virulence factor BrkB family protein compare
A4249_RS13970 +0.5 2.6 amidohydrolase family protein compare
A4249_RS11660 +0.5 2.2 mercury resistance system transport protein MerF compare
A4249_RS04880 +0.5 3.1 AMP-binding protein compare
A4249_RS08530 +0.5 2.3 RNA polymerase-binding protein DksA compare
A4249_RS08485 +0.5 2.0 Na+/H+ antiporter subunit C compare
A4249_RS05595 +0.5 1.5 dicarboxylate/amino acid:cation symporter compare
A4249_RS14385 +0.5 1.8 DUF1318 domain-containing protein compare
A4249_RS05340 +0.5 1.2 helix-hairpin-helix domain-containing protein compare
A4249_RS12930 +0.5 1.6 HAD-IA family hydrolase compare
A4249_RS03440 +0.5 1.5 hypothetical protein compare
A4249_RS04390 +0.5 2.2 ABC transporter ATP-binding protein compare
A4249_RS08585 +0.5 1.8 ABC-type transport auxiliary lipoprotein family protein compare
A4249_RS03135 +0.5 1.3 TolC family protein compare
A4249_RS06920 +0.5 1.6 hypothetical protein compare
A4249_RS16565 +0.5 1.4 hypothetical protein compare
A4249_RS10570 +0.5 1.7 DUF1428 domain-containing protein compare
A4249_RS14165 +0.5 1.6 prolyl-tRNA synthetase associated domain-containing protein compare
A4249_RS13020 +0.5 2.8 NAD-dependent epimerase/dehydratase family protein compare
A4249_RS06075 +0.5 1.1 flagellar motor protein MotB compare
A4249_RS10495 +0.5 2.2 DUF2170 family protein compare
A4249_RS06670 +0.5 3.0 phospholipase D-like domain-containing protein compare
A4249_RS13165 +0.4 2.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase compare
A4249_RS16940 +0.4 1.7 GIY-YIG nuclease family protein compare
A4249_RS05395 +0.4 1.7 hypothetical protein compare
A4249_RS11400 +0.4 1.4 GNAT family N-acetyltransferase compare
A4249_RS08390 +0.4 3.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
A4249_RS01235 +0.4 0.9 hypothetical protein compare
A4249_RS07070 +0.4 1.9 hypothetical protein compare
A4249_RS06465 +0.4 1.2 hypothetical protein compare
A4249_RS00135 +0.4 2.1 cytochrome c oxidase subunit 3 compare
A4249_RS11460 +0.4 2.0 DUF2125 domain-containing protein compare
A4249_RS07020 +0.4 1.0 hypothetical protein compare
A4249_RS16630 +0.4 1.1 DUF2474 family protein compare
A4249_RS09405 +0.4 0.9 beta-N-acetylhexosaminidase compare
A4249_RS10320 +0.4 1.0 HAMP domain-containing sensor histidine kinase compare
A4249_RS06995 +0.4 1.1 DUF968 domain-containing protein compare
A4249_RS02395 +0.4 1.5 FecR domain-containing protein compare
A4249_RS08600 +0.4 1.3 ABC transporter permease compare
A4249_RS14775 +0.4 3.4 sigma-70 family RNA polymerase sigma factor compare
A4249_RS00020 +0.4 3.0 threonine synthase compare
A4249_RS02930 +0.4 1.2 MarR family transcriptional regulator compare
A4249_RS15185 +0.4 1.7 bile acid:sodium symporter compare
A4249_RS14980 +0.4 1.8 TetR/AcrR family transcriptional regulator compare
A4249_RS14030 +0.4 2.3 tryptophan 2,3-dioxygenase compare
A4249_RS17085 +0.4 0.8 sugar O-acetyltransferase compare
A4249_RS11825 +0.4 0.6 DUF6521 family protein compare
A4249_RS10295 +0.4 0.7 hypothetical protein compare
A4249_RS16550 +0.4 1.3 hypothetical protein compare
A4249_RS03385 +0.4 1.9 hypothetical protein compare
A4249_RS01115 +0.4 1.0 LysR substrate-binding domain-containing protein compare
A4249_RS01615 +0.4 1.2 GNAT family N-acetyltransferase compare
A4249_RS02900 +0.4 1.9 hypothetical protein compare
A4249_RS12470 +0.4 0.4 histidinol-phosphatase compare
A4249_RS03230 +0.4 0.8 copper homeostasis periplasmic binding protein CopC compare
A4249_RS03225 +0.4 1.4 hypothetical protein compare
A4249_RS15995 +0.4 2.4 DUF983 domain-containing protein compare
A4249_RS09955 +0.4 3.3 alpha-amylase family glycosyl hydrolase compare
A4249_RS12270 +0.4 2.8 DUF418 domain-containing protein compare
A4249_RS15250 +0.4 2.1 response regulator compare
A4249_RS13305 +0.4 1.9 YraN family protein compare
A4249_RS09120 +0.3 1.0 hypothetical protein compare
A4249_RS11910 +0.3 1.8 pyridoxamine 5'-phosphate oxidase family protein compare
A4249_RS01705 +0.3 1.1 hypothetical protein compare
A4249_RS07050 +0.3 0.7 hypothetical protein compare
A4249_RS11730 +0.3 1.3 DUF305 domain-containing protein compare
A4249_RS16080 +0.3 1.2 ribosome-associated translation inhibitor RaiA compare
A4249_RS16655 +0.3 1.5 hypothetical protein compare
A4249_RS07925 +0.3 2.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
A4249_RS05590 +0.3 1.2 amino acid ABC transporter substrate-binding protein compare
A4249_RS01780 +0.3 1.7 hypothetical protein compare
A4249_RS16420 +0.3 1.3 hypothetical protein compare
A4249_RS07830 +0.3 1.5 FAD-binding oxidoreductase compare
A4249_RS15275 +0.3 1.2 peptide chain release factor 3 compare
A4249_RS01405 +0.3 1.4 hypothetical protein compare
A4249_RS08380 +0.3 1.1 RidA family protein compare
A4249_RS02745 +0.3 1.2 flagellin compare
A4249_RS02765 +0.3 0.8 hypothetical protein compare
A4249_RS05455 +0.3 1.7 ABC transporter substrate-binding protein compare
A4249_RS00030 +0.3 1.7 hypothetical protein compare
A4249_RS14215 +0.3 1.1 ester cyclase compare
A4249_RS05940 +0.3 2.6 COX15/CtaA family protein compare
A4249_RS14080 +0.3 1.8 TnsA endonuclease N-terminal domain-containing protein compare
A4249_RS12450 +0.3 2.0 GNAT family N-acetyltransferase compare
A4249_RS05320 +0.3 1.7 acyl-CoA dehydrogenase family protein compare
A4249_RS00530 +0.3 2.3 outer membrane protein transport protein compare
A4249_RS00355 +0.3 1.1 Txe/YoeB family addiction module toxin compare
A4249_RS00755 +0.3 0.8 YbdD/YjiX family protein compare
A4249_RS15715 +0.3 2.5 phosphomethylpyrimidine synthase ThiC compare
A4249_RS12280 +0.3 0.8 esterase-like activity of phytase family protein compare
A4249_RS14035 +0.3 1.7 PA2169 family four-helix-bundle protein compare
A4249_RS05290 +0.3 1.4 Crp/Fnr family transcriptional regulator compare
A4249_RS15100 +0.3 1.6 cytochrome c family protein compare
A4249_RS06945 +0.3 1.5 hypothetical protein compare
A4249_RS08140 +0.3 1.6 helix-turn-helix domain-containing protein compare
A4249_RS16620 +0.3 1.7 hypothetical protein compare
A4249_RS12225 +0.3 0.6 SDR family oxidoreductase compare
A4249_RS03120 +0.3 1.5 cation transporter compare
A4249_RS09515 +0.3 0.8 hypothetical protein compare
A4249_RS14395 +0.3 0.9 hypothetical protein compare
A4249_RS04865 +0.3 1.6 hypothetical protein compare
A4249_RS09620 +0.3 1.0 flagellar basal-body rod protein FlgF compare
A4249_RS04020 +0.3 0.6 energy transducer TonB compare
A4249_RS15235 +0.3 0.8 flagellar biosynthesis protein FlhB compare
A4249_RS09335 +0.3 2.0 aminomethyl-transferring glycine dehydrogenase subunit GcvPA compare
A4249_RS16760 +0.3 1.5 hypothetical protein compare
A4249_RS07220 +0.3 1.5 HAD-IA family hydrolase compare
A4249_RS01465 +0.3 1.0 hypothetical protein compare
A4249_RS01555 +0.3 1.0 response regulator compare
A4249_RS13220 +0.3 1.0 monofunctional biosynthetic peptidoglycan transglycosylase compare
A4249_RS06785 +0.3 0.8 endolytic transglycosylase MltG compare
A4249_RS04480 +0.3 1.1 HIT family protein compare
A4249_RS15295 +0.3 1.4 mechanosensitive ion channel compare
A4249_RS03680 +0.3 0.8 DUF6249 domain-containing protein compare
A4249_RS06660 +0.3 2.1 TPM domain-containing protein compare
A4249_RS11100 +0.3 1.4 response regulator compare
A4249_RS09615 +0.3 1.3 flagellar basal body-associated FliL family protein compare
A4249_RS07445 +0.3 1.1 hypothetical protein compare
A4249_RS11055 +0.3 2.6 NAD-dependent epimerase/dehydratase family protein compare
A4249_RS00215 +0.3 1.4 bifunctional diguanylate cyclase/phosphodiesterase compare
A4249_RS00700 +0.3 0.6 hypothetical protein compare
A4249_RS13330 +0.3 0.9 hypothetical protein compare
A4249_RS14480 +0.3 1.3 helix-turn-helix domain-containing protein compare
A4249_RS11520 +0.3 1.2 class I SAM-dependent methyltransferase compare
A4249_RS06925 +0.3 1.9 hypothetical protein compare
A4249_RS11525 +0.3 1.0 DsrE family protein compare
A4249_RS02125 +0.3 1.8 globin-coupled sensor protein compare
A4249_RS09325 +0.3 1.1 glycine cleavage system aminomethyltransferase GcvT compare
A4249_RS15690 +0.3 1.2 DsbA family oxidoreductase compare
A4249_RS07800 +0.3 1.7 DUF2336 domain-containing protein compare
A4249_RS03520 +0.3 1.0 antibiotic biosynthesis monooxygenase compare
A4249_RS16975 +0.3 1.7 hypothetical protein compare
A4249_RS02165 +0.3 0.4 c-type cytochrome compare
A4249_RS12435 +0.3 1.5 DUF2975 domain-containing protein compare
A4249_RS14830 +0.3 0.7 peptidoglycan DD-metalloendopeptidase family protein compare
A4249_RS16075 +0.3 1.6 RNA polymerase factor sigma-54 compare
A4249_RS15975 +0.3 1.1 DMT family protein compare
A4249_RS02865 +0.3 0.6 arsenate reductase family protein compare
A4249_RS09475 +0.3 1.7 glycosyltransferase family 9 protein compare
A4249_RS11985 +0.3 1.0 hypothetical protein compare
A4249_RS00160 +0.3 1.7 NADP-dependent oxidoreductase compare
A4249_RS16520 +0.3 1.2 hypothetical protein compare
A4249_RS03325 +0.3 1.2 hypothetical protein compare
A4249_RS01355 +0.3 0.6 hypothetical protein compare
A4249_RS10915 +0.3 0.7 hypothetical protein compare
A4249_RS03075 +0.3 0.6 arsenic resistance N-acetyltransferase ArsN2 compare
A4249_RS09745 +0.2 1.8 response regulator compare
A4249_RS00860 +0.2 0.7 hypothetical protein compare
A4249_RS06370 +0.2 0.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Inosine across organisms