Experiment set2S23 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Inosine 0.3728 mM carbon source

200 most important genes:

  gene name fitness t score description  
A4249_RS07610 -2.8 -1.9 methyltransferase type 11 compare
A4249_RS11795 -2.8 -2.7 DUF2493 domain-containing protein compare
A4249_RS02905 -2.6 -1.8 tRNA guanosine(34) transglycosylase Tgt compare
A4249_RS08550 -2.3 -2.3 flagellar basal-body protein FlbY compare
A4249_RS08270 -2.0 -3.4 DedA family protein compare
A4249_RS07145 -2.0 -2.2 hypothetical protein compare
A4249_RS08375 -1.9 -2.5 hypothetical protein compare
A4249_RS00305 -1.8 -2.7 DUF4908 domain-containing protein compare
A4249_RS12260 -1.8 -2.1 3-hydroxybutyryl-CoA dehydrogenase compare
A4249_RS04475 -1.8 -2.1 response regulator transcription factor compare
A4249_RS06665 -1.7 -2.0 endonuclease/exonuclease/phosphatase family protein compare
A4249_RS17085 -1.7 -1.7 sugar O-acetyltransferase compare
A4249_RS05485 -1.7 -2.5 uracil-DNA glycosylase compare
A4249_RS08865 -1.6 -1.9 DUF1192 domain-containing protein compare
A4249_RS02325 -1.6 -1.6 23S ribosomal RNA compare
A4249_RS16485 -1.6 -1.3 hypothetical protein compare
A4249_RS07060 -1.5 -1.7 single-stranded DNA-binding protein compare
A4249_RS12640 -1.5 -1.7 hypothetical protein compare
A4249_RS12795 -1.4 -1.5 DsbE family thiol:disulfide interchange protein compare
A4249_RS01590 -1.4 -1.7 site-specific DNA-methyltransferase compare
A4249_RS01220 -1.4 -2.9 hypothetical protein compare
A4249_RS02645 -1.4 -1.5 cobalamin biosynthesis protein CbiG compare
A4249_RS02165 -1.4 -1.1 c-type cytochrome compare
A4249_RS15150 -1.3 -1.3 hypothetical protein compare
A4249_RS00895 -1.2 -1.9 DUF1476 domain-containing protein compare
A4249_RS15360 -1.1 -1.2 DNA replication/repair protein RecF compare
A4249_RS10110 -1.1 -2.0 DUF805 domain-containing protein compare
A4249_RS04490 -1.1 -1.7 cobaltochelatase subunit CobS compare
A4249_RS10105 -1.1 -1.1 DUF2460 domain-containing protein compare
A4249_RS13185 -1.1 -2.2 dihydrolipoyl dehydrogenase compare
A4249_RS15660 -1.1 -2.0 hypothetical protein compare
A4249_RS13195 -1.1 -2.9 alpha-ketoacid dehydrogenase subunit beta compare
A4249_RS06580 -1.1 -2.8 HWE histidine kinase domain-containing protein compare
A4249_RS10510 -1.0 -2.4 hypothetical protein compare
A4249_RS16010 -1.0 -1.7 flagellar type III secretion system pore protein FliP compare
A4249_RS01075 -1.0 -2.6 DNA-binding domain-containing protein compare
A4249_RS16585 -1.0 -2.6 hypothetical protein compare
A4249_RS11365 -1.0 -1.5 cation diffusion facilitator family transporter compare
A4249_RS12390 -1.0 -2.3 ATP-dependent protease subunit HslV compare
A4249_RS04085 -1.0 -2.0 ribonuclease E/G compare
A4249_RS15865 -0.9 -1.3 Holliday junction branch migration DNA helicase RuvB compare
A4249_RS12830 -0.9 -1.3 YkvA family protein compare
A4249_RS06550 -0.9 -1.7 chorismate mutase compare
A4249_RS12210 -0.9 -1.3 tyrosine recombinase XerC compare
A4249_RS08025 -0.9 -1.8 DUF2155 domain-containing protein compare
A4249_RS16725 -0.9 -1.0 hypothetical protein compare
A4249_RS10360 -0.9 -1.1 HAMP domain-containing sensor histidine kinase compare
A4249_RS04080 -0.9 -2.5 M48 family metalloprotease compare
A4249_RS06180 -0.9 -2.4 transcriptional repressor LexA compare
A4249_RS12400 -0.9 -0.8 hypothetical protein compare
A4249_RS11720 -0.9 -0.8 strawberry notch C-terminal domain-containing protein compare
A4249_RS05640 -0.9 -1.6 NfeD family protein compare
A4249_RS03845 -0.8 -2.0 TerC family protein compare
A4249_RS13535 -0.8 -2.4 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
A4249_RS11650 -0.8 -2.2 mercuric transporter MerT family protein compare
A4249_RS14205 -0.8 -1.4 response regulator compare
A4249_RS13200 -0.8 -1.7 thiamine pyrophosphate-dependent enzyme compare
A4249_RS15415 -0.8 -1.9 hypothetical protein compare
A4249_RS01120 -0.8 -1.8 uracil-DNA glycosylase compare
A4249_RS11780 -0.8 -0.7 hypothetical protein compare
A4249_RS13175 -0.8 -0.8 Rrf2 family transcriptional regulator compare
A4249_RS14445 -0.8 -1.4 hypothetical protein compare
A4249_RS16095 -0.8 -1.2 Hsp20 family protein compare
A4249_RS10835 -0.8 -1.9 c-type cytochrome biogenesis protein CcmI compare
A4249_RS14255 -0.7 -0.8 ribonuclease P protein component compare
A4249_RS14695 -0.7 -1.8 transcription elongation factor GreA compare
A4249_RS00240 -0.7 -1.5 rhodanese family protein compare
A4249_RS00100 -0.7 -1.4 PadR family transcriptional regulator compare
A4249_RS02820 -0.7 -1.4 Ppx/GppA phosphatase family protein compare
A4249_RS14825 -0.7 -2.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
A4249_RS06995 -0.7 -1.9 DUF968 domain-containing protein compare
A4249_RS10430 -0.7 -2.8 S1/P1 Nuclease compare
A4249_RS12615 -0.7 -1.7 recombinase RecA compare
A4249_RS13560 -0.7 -1.5 glutaredoxin 3 compare
A4249_RS02260 -0.7 -1.9 cation:proton antiporter compare
A4249_RS12275 -0.7 -2.3 cobaltochelatase subunit CobT compare
A4249_RS04635 -0.7 -5.2 cyclic nucleotide-binding domain-containing protein compare
A4249_RS00605 -0.7 -1.2 host attachment protein compare
A4249_RS08855 -0.7 -1.4 L,D-transpeptidase family protein compare
A4249_RS11825 -0.7 -0.8 DUF6521 family protein compare
A4249_RS05620 -0.6 -2.3 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
A4249_RS07995 -0.6 -1.0 type II 3-dehydroquinate dehydratase compare
A4249_RS15245 -0.6 -1.5 protein-glutamate O-methyltransferase CheR compare
A4249_RS11100 -0.6 -2.1 response regulator compare
A4249_RS01460 -0.6 -1.0 signal peptide peptidase SppA compare
A4249_RS13180 -0.6 -0.8 SDR family oxidoreductase compare
A4249_RS05460 -0.6 -2.3 iron ABC transporter permease compare
A4249_RS00050 -0.6 -0.6 type 1 glutamine amidotransferase compare
A4249_RS11560 -0.6 -0.8 peroxiredoxin compare
A4249_RS16515 -0.6 -2.0 hypothetical protein compare
A4249_RS07940 -0.6 -2.1 hypothetical protein compare
A4249_RS06230 -0.6 -1.0 OmpH family outer membrane protein compare
A4249_RS08535 -0.6 -0.7 flagellar assembly protein FliX compare
A4249_RS02975 -0.6 -0.7 oligosaccharide flippase family protein compare
A4249_RS04840 -0.6 -2.2 Na+/H+ antiporter compare
A4249_RS10295 -0.6 -0.7 hypothetical protein compare
A4249_RS04215 -0.6 -1.3 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
A4249_RS08510 -0.6 -1.2 hypothetical protein compare
A4249_RS10585 -0.6 -1.4 extensin family protein compare
A4249_RS07920 -0.6 -2.3 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS14580 -0.6 -1.1 hypothetical protein compare
A4249_RS14065 -0.6 -1.4 MFS transporter compare
A4249_RS09395 -0.6 -2.5 SMC-Scp complex subunit ScpB compare
A4249_RS16520 -0.6 -1.8 hypothetical protein compare
A4249_RS04645 -0.6 -2.6 5'/3'-nucleotidase SurE compare
A4249_RS08370 -0.6 -2.2 polysaccharide deacetylase family protein compare
A4249_RS15345 -0.6 -1.6 DUF6491 family protein compare
A4249_RS09785 -0.6 -2.6 flagellar basal-body MS-ring/collar protein FliF compare
A4249_RS06325 -0.6 -1.3 ribonuclease J compare
A4249_RS00880 -0.5 -2.6 YbhB/YbcL family Raf kinase inhibitor-like protein compare
A4249_RS06680 -0.5 -0.8 tipN compare
A4249_RS03180 -0.5 -1.4 hypothetical protein compare
A4249_RS01465 -0.5 -1.5 hypothetical protein compare
A4249_RS04960 -0.5 -1.4 UvrD-helicase domain-containing protein compare
A4249_RS00600 -0.5 -2.4 LamG domain-containing protein compare
A4249_RS08220 -0.5 -0.9 phosphoribosylglycinamide formyltransferase compare
A4249_RS05165 -0.5 -1.4 Hpt domain-containing protein compare
A4249_RS08665 -0.5 -2.1 glyoxalase compare
A4249_RS00235 -0.5 -1.3 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS16945 -0.5 -1.3 hypothetical protein compare
A4249_RS11835 -0.5 -2.6 hypothetical protein compare
A4249_RS07915 -0.5 -1.8 EF-hand domain-containing protein compare
A4249_RS13545 -0.5 -1.4 Flp family type IVb pilin compare
A4249_RS04615 -0.5 -1.6 DEAD/DEAH box helicase compare
A4249_RS15050 -0.5 -1.3 lysozyme inhibitor LprI family protein compare
A4249_RS16165 -0.5 -1.2 homoserine O-succinyltransferase compare
A4249_RS00720 -0.5 -0.6 DUF1294 domain-containing protein compare
A4249_RS01615 -0.5 -1.1 GNAT family N-acetyltransferase compare
A4249_RS05455 -0.5 -2.5 ABC transporter substrate-binding protein compare
A4249_RS12205 -0.5 -0.5 DUF484 family protein compare
A4249_RS12240 -0.5 -1.4 hydroxyisourate hydrolase compare
A4249_RS09645 -0.5 -1.4 hypothetical protein compare
A4249_RS15055 -0.5 -0.9 SprT family zinc-dependent metalloprotease compare
A4249_RS04465 -0.5 -2.1 SURF1 family protein compare
A4249_RS12330 -0.5 -1.9 hypothetical protein compare
A4249_RS15575 -0.5 -2.8 protein-glutamate O-methyltransferase compare
A4249_RS09035 -0.5 -0.7 redox-regulated ATPase YchF compare
A4249_RS16615 -0.5 -0.6 hypothetical protein compare
A4249_RS10390 -0.5 -0.8 translation elongation factor 4 compare
A4249_RS14360 -0.5 -1.1 pilus assembly protein compare
A4249_RS01610 -0.5 -0.6 TetR/AcrR family transcriptional regulator compare
A4249_RS06165 -0.5 -1.6 aminodeoxychorismate/anthranilate synthase component II compare
A4249_RS03590 -0.5 -4.0 enoyl-CoA hydratase/isomerase family protein compare
A4249_RS05390 -0.5 -1.1 SOS response-associated peptidase family protein compare
A4249_RS14515 -0.5 -3.7 enoyl-CoA hydratase-related protein compare
A4249_RS14900 -0.5 -1.9 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein compare
A4249_RS10490 -0.5 -1.6 YjfK family protein compare
A4249_RS10365 -0.5 -0.6 hypothetical protein compare
A4249_RS07105 -0.5 -0.8 hypothetical protein compare
A4249_RS06635 -0.5 -1.8 manganese efflux pump MntP family protein compare
A4249_RS04125 -0.5 -0.9 mechanosensitive ion channel family protein compare
A4249_RS08570 -0.4 -2.1 group III truncated hemoglobin compare
A4249_RS15230 -0.4 -2.0 flagellar biosynthetic protein FliR compare
A4249_RS12815 -0.4 -1.7 DUF3429 domain-containing protein compare
A4249_RS12860 -0.4 -0.7 DUF350 domain-containing protein compare
A4249_RS06945 -0.4 -1.8 hypothetical protein compare
A4249_RS02635 -0.4 -0.7 RNA polymerase sigma factor compare
A4249_RS16555 -0.4 -1.0 hypothetical protein compare
A4249_RS05845 -0.4 -1.0 sigma-70 family RNA polymerase sigma factor compare
A4249_RS00930 -0.4 -2.2 glutathione S-transferase family protein compare
A4249_RS09355 -0.4 -1.7 hypothetical protein compare
A4249_RS03135 -0.4 -0.6 TolC family protein compare
A4249_RS08255 -0.4 -0.9 serine O-acetyltransferase compare
A4249_RS04205 -0.4 -2.4 GFA family protein compare
A4249_RS11755 -0.4 -1.3 efflux RND transporter periplasmic adaptor subunit compare
A4249_RS02565 -0.4 -2.9 cytochrome b N-terminal domain-containing protein compare
A4249_RS03060 -0.4 -0.7 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS02675 -0.4 -1.2 N-acetyltransferase compare
A4249_RS00700 -0.4 -1.0 hypothetical protein compare
A4249_RS10915 -0.4 -0.9 hypothetical protein compare
A4249_RS11965 -0.4 -1.7 cupin domain-containing protein compare
A4249_RS09940 -0.4 -1.8 sugar MFS transporter compare
A4249_RS16550 -0.4 -1.2 hypothetical protein compare
A4249_RS07240 -0.4 -1.3 hypothetical protein compare
A4249_RS04790 -0.4 -0.8 sulfurtransferase TusA family protein compare
A4249_RS02735 -0.4 -1.2 flagellin compare
A4249_RS14845 -0.4 -2.4 saccharopine dehydrogenase family protein compare
A4249_RS10200 -0.4 -1.1 YcgN family cysteine cluster protein compare
A4249_RS05335 -0.4 -2.2 galactosyltransferase-related protein compare
A4249_RS15695 -0.4 -1.7 hypothetical protein compare
A4249_RS08730 -0.4 -2.6 hypothetical protein compare
A4249_RS14675 -0.4 -1.3 metallopeptidase family protein compare
A4249_RS13370 -0.4 -2.4 NAD(P)/FAD-dependent oxidoreductase compare
A4249_RS15110 -0.4 -1.0 YbaB/EbfC family nucleoid-associated protein compare
A4249_RS13620 -0.4 -2.0 dienelactone hydrolase family protein compare
A4249_RS16955 -0.4 -2.1 hypothetical protein compare
A4249_RS15060 -0.4 -2.5 polyhydroxyalkanoate depolymerase compare
A4249_RS04865 -0.4 -1.9 hypothetical protein compare
A4249_RS14215 -0.4 -0.6 ester cyclase compare
A4249_RS14835 -0.4 -1.6 S41 family peptidase compare
A4249_RS08885 -0.4 -0.7 DUF465 domain-containing protein compare
A4249_RS01965 -0.4 -1.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
A4249_RS11680 -0.4 -1.2 7-cyano-7-deazaguanine synthase compare
A4249_RS12230 -0.4 -1.5 hypothetical protein compare
A4249_RS08330 -0.4 -1.4 NUDIX domain-containing protein compare
A4249_RS16015 -0.4 -0.5 flagellar biosynthetic protein FliO compare
A4249_RS07910 -0.4 -0.6 2-hydroxyacid dehydrogenase compare
A4249_RS04345 -0.4 -1.2 glycosyltransferase family A protein compare
A4249_RS05915 -0.4 -1.8 peptide-methionine (R)-S-oxide reductase MsrB compare
A4249_RS11775 -0.4 -1.5 helix-turn-helix domain-containing protein compare


Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Inosine across organisms