Experiment set2S21 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Hypoxanthine 0.7347 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
A4249_RS09255 +1.2 1.3 phosphoribosylamine--glycine ligase compare
A4249_RS00980 +1.1 10.7 pyruvate, phosphate dikinase compare
A4249_RS05505 +1.1 4.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
A4249_RS08440 +1.1 1.9 TlyA family RNA methyltransferase compare
A4249_RS06075 +1.0 2.5 flagellar motor protein MotB compare
A4249_RS11720 +1.0 2.3 strawberry notch C-terminal domain-containing protein compare
A4249_RS09325 +1.0 4.8 glycine cleavage system aminomethyltransferase GcvT compare
A4249_RS11560 +0.8 1.6 peroxiredoxin compare
A4249_RS14485 +0.8 3.8 phosphoenolpyruvate--protein phosphotransferase compare
A4249_RS13805 +0.8 1.0 HAD family hydrolase compare
A4249_RS08530 +0.8 3.7 RNA polymerase-binding protein DksA compare
A4249_RS06880 +0.7 1.2 hypothetical protein compare
A4249_RS14060 +0.7 1.8 YidB family protein compare
A4249_RS00170 +0.7 1.5 TetR/AcrR family transcriptional regulator compare
A4249_RS00050 +0.7 1.6 type 1 glutamine amidotransferase compare
A4249_RS00215 +0.7 3.1 bifunctional diguanylate cyclase/phosphodiesterase compare
A4249_RS09605 +0.7 1.3 DUF6468 domain-containing protein compare
A4249_RS12870 +0.7 2.5 DUF6356 family protein compare
A4249_RS04565 +0.6 3.4 Rrf2 family transcriptional regulator compare
A4249_RS13960 +0.6 2.3 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB compare
A4249_RS01705 +0.6 2.5 hypothetical protein compare
A4249_RS12930 +0.6 2.0 HAD-IA family hydrolase compare
A4249_RS00180 +0.6 1.7 hypothetical protein compare
A4249_RS09330 +0.6 1.6 glycine cleavage system protein GcvH compare
A4249_RS00145 +0.6 1.3 SURF1 family protein compare
A4249_RS07645 +0.6 2.6 fumarylacetoacetate hydrolase family protein compare
A4249_RS09515 +0.6 2.1 hypothetical protein compare
A4249_RS05185 +0.6 2.5 response regulator compare
A4249_RS06440 +0.6 4.2 glycosyltransferase compare
A4249_RS16565 +0.6 2.2 hypothetical protein compare
A4249_RS06670 +0.6 4.2 phospholipase D-like domain-containing protein compare
A4249_RS15290 +0.6 5.1 malate synthase G compare
A4249_RS17005 +0.6 1.2 glucokinase compare
A4249_RS07290 +0.6 1.5 ribonuclease E/G compare
A4249_RS10550 +0.5 1.0 winged helix-turn-helix transcriptional regulator compare
A4249_RS16155 +0.5 1.5 tRNA-Glu compare
A4249_RS15190 +0.5 5.0 acetate--CoA ligase compare
A4249_RS10050 +0.5 3.6 fructose-bisphosphate aldolase class II compare
A4249_RS12480 +0.5 4.5 alpha/beta hydrolase compare
A4249_RS04485 +0.5 1.0 phage holin family protein compare
A4249_RS16545 +0.5 2.4 hypothetical protein compare
A4249_RS02590 +0.5 4.3 helix-turn-helix transcriptional regulator compare
A4249_RS15455 +0.5 1.2 Rieske (2Fe-2S) protein compare
A4249_RS00115 +0.5 2.3 heme o synthase compare
A4249_RS15965 +0.5 2.5 YdeI/OmpD-associated family protein compare
A4249_RS11930 +0.5 1.2 YcxB family protein compare
A4249_RS16425 +0.5 1.2 hypothetical protein compare
A4249_RS01635 +0.5 1.5 ABC transporter ATP-binding protein compare
A4249_RS16015 +0.5 1.1 flagellar biosynthetic protein FliO compare
A4249_RS13970 +0.5 2.6 amidohydrolase family protein compare
A4249_RS07810 +0.5 2.7 hypothetical protein compare
A4249_RS16950 +0.5 1.8 flavin reductase family protein compare
A4249_RS16945 +0.5 1.2 hypothetical protein compare
A4249_RS15250 +0.5 3.3 response regulator compare
A4249_RS00165 +0.5 2.7 SDR family oxidoreductase compare
A4249_RS02600 +0.5 2.3 hypothetical protein compare
A4249_RS00020 +0.5 3.9 threonine synthase compare
A4249_RS03190 +0.5 1.7 ATPase, T2SS/T4P/T4SS family compare
A4249_RS08380 +0.5 2.0 RidA family protein compare
A4249_RS17010 +0.5 3.6 glucokinase compare
A4249_RS01120 +0.5 1.8 uracil-DNA glycosylase compare
A4249_RS11825 +0.5 1.0 DUF6521 family protein compare
A4249_RS08025 +0.5 1.4 DUF2155 domain-containing protein compare
A4249_RS09535 +0.4 1.8 FecR domain-containing protein compare
A4249_RS14680 +0.4 1.7 PAS domain-containing sensor histidine kinase compare
A4249_RS04480 +0.4 0.9 HIT family protein compare
A4249_RS03135 +0.4 1.5 TolC family protein compare
A4249_RS02595 +0.4 3.4 isocitrate lyase compare
A4249_RS12450 +0.4 2.9 GNAT family N-acetyltransferase compare
A4249_RS10765 +0.4 2.2 Lrp/AsnC ligand binding domain-containing protein compare
A4249_RS02165 +0.4 0.7 c-type cytochrome compare
A4249_RS09615 +0.4 2.1 flagellar basal body-associated FliL family protein compare
A4249_RS06465 +0.4 1.4 hypothetical protein compare
A4249_RS07305 +0.4 1.3 UPF0262 family protein compare
A4249_RS01075 +0.4 1.7 DNA-binding domain-containing protein compare
A4249_RS16455 +0.4 0.8 helix-turn-helix transcriptional regulator compare
A4249_RS02635 +0.4 0.7 RNA polymerase sigma factor compare
A4249_RS02905 +0.4 0.5 tRNA guanosine(34) transglycosylase Tgt compare
A4249_RS03065 +0.4 1.2 arsenate reductase (glutaredoxin) compare
A4249_RS16685 +0.4 0.9 tRNA-Arg compare
A4249_RS08350 +0.4 2.7 PleD family two-component system response regulator compare
A4249_RS16625 +0.4 1.6 hypothetical protein compare
A4249_RS14035 +0.4 2.4 PA2169 family four-helix-bundle protein compare
A4249_RS10500 +0.4 1.7 PspA/IM30 family protein compare
A4249_RS15865 +0.4 0.8 Holliday junction branch migration DNA helicase RuvB compare
A4249_RS00230 +0.4 2.6 MBL fold metallo-hydrolase compare
A4249_RS04880 +0.4 2.5 AMP-binding protein compare
A4249_RS06940 +0.4 1.7 hypothetical protein compare
A4249_RS03125 +0.4 1.3 class I SAM-dependent methyltransferase compare
A4249_RS13035 +0.4 2.1 hypothetical protein compare
A4249_RS01195 +0.4 2.1 TIGR02594 family protein compare
A4249_RS00100 +0.4 1.1 PadR family transcriptional regulator compare
A4249_RS06680 +0.4 0.7 tipN compare
A4249_RS03310 +0.4 2.1 RNA polymerase sigma factor compare
A4249_RS15325 +0.4 3.0 long-chain-acyl-CoA synthetase compare
A4249_RS14390 +0.4 1.9 DNA cytosine methyltransferase compare
A4249_RS07120 +0.4 1.0 hypothetical protein compare
A4249_RS11365 +0.4 0.8 cation diffusion facilitator family transporter compare
A4249_RS01650 +0.4 0.4 DUF1289 domain-containing protein compare
A4249_RS11660 +0.4 1.2 mercury resistance system transport protein MerF compare
A4249_RS15825 +0.4 1.5 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS06830 +0.4 1.8 chorismate mutase compare
A4249_RS13760 +0.4 0.5 YggS family pyridoxal phosphate-dependent enzyme compare
A4249_RS05485 +0.4 1.0 uracil-DNA glycosylase compare
A4249_RS02680 +0.4 1.9 DUF1285 domain-containing protein compare
A4249_RS09120 +0.3 1.0 hypothetical protein compare
A4249_RS05320 +0.3 1.9 acyl-CoA dehydrogenase family protein compare
A4249_RS16135 +0.3 1.4 glycoside hydrolase family 3 N-terminal domain-containing protein compare
A4249_RS16710 +0.3 0.8 hypothetical protein compare
A4249_RS15245 +0.3 1.7 protein-glutamate O-methyltransferase CheR compare
A4249_RS16780 +0.3 1.7 HNH endonuclease compare
A4249_RS11640 +0.3 1.1 hypothetical protein compare
A4249_RS09090 +0.3 0.6 hypothetical protein compare
A4249_RS12065 +0.3 1.0 transcriptional regulator compare
A4249_RS06970 +0.3 0.8 hypothetical protein compare
A4249_RS09610 +0.3 2.1 flagellar motor switch protein FliM compare
A4249_RS10540 +0.3 1.2 DEAD/DEAH box helicase compare
A4249_RS09955 +0.3 3.0 alpha-amylase family glycosyl hydrolase compare
A4249_RS14360 +0.3 1.3 pilus assembly protein compare
A4249_RS09730 +0.3 1.7 CsbD family protein compare
A4249_RS07255 +0.3 1.8 DUF2147 domain-containing protein compare
A4249_RS06555 +0.3 1.0 Hpt domain-containing protein compare
A4249_RS02845 +0.3 1.5 succinylglutamate-semialdehyde dehydrogenase compare
A4249_RS09035 +0.3 0.7 redox-regulated ATPase YchF compare
A4249_RS00065 +0.3 1.7 hypothetical protein compare
A4249_RS00395 +0.3 1.0 DUF2975 domain-containing protein compare
A4249_RS05460 +0.3 1.2 iron ABC transporter permease compare
A4249_RS14400 +0.3 1.6 LytTR family transcriptional regulator DNA-binding domain-containing protein compare
A4249_RS16325 +0.3 1.5 helix-turn-helix transcriptional regulator compare
A4249_RS00075 +0.3 1.8 alpha/beta hydrolase compare
A4249_RS13260 +0.3 2.2 glycerol kinase GlpK compare
A4249_RS09335 +0.3 2.4 aminomethyl-transferring glycine dehydrogenase subunit GcvPA compare
A4249_RS00380 +0.3 1.5 MerR family DNA-binding transcriptional regulator compare
A4249_RS15330 +0.3 2.6 flagellar motor stator protein MotA compare
A4249_RS03350 +0.3 1.4 hypothetical protein compare
A4249_RS10630 +0.3 1.4 FAD:protein FMN transferase compare
A4249_RS16540 +0.3 1.0 hypothetical protein compare
A4249_RS05580 +0.3 2.0 O-antigen ligase compare
A4249_RS08040 +0.3 1.0 pentapeptide repeat-containing protein compare
A4249_RS09405 +0.3 0.6 beta-N-acetylhexosaminidase compare
A4249_RS08515 +0.3 2.1 TIGR00730 family Rossman fold protein compare
A4249_RS07190 +0.3 1.4 hypothetical protein compare
A4249_RS06950 +0.3 1.8 hypothetical protein compare
A4249_RS05340 +0.3 0.6 helix-hairpin-helix domain-containing protein compare
A4249_RS05510 +0.3 1.7 TIGR00730 family Rossman fold protein compare
A4249_RS11675 +0.3 1.6 hypothetical protein compare
A4249_RS00080 +0.3 1.3 DUF3298 and DUF4163 domain-containing protein compare
A4249_RS01560 +0.3 1.8 histidine kinase dimerization/phosphoacceptor domain -containing protein compare
A4249_RS16745 +0.3 1.2 DUF2252 family protein compare
A4249_RS07180 +0.3 1.6 hypothetical protein compare
A4249_RS06155 +0.3 1.2 anthranilate synthase component I compare
A4249_RS10290 +0.3 2.0 flagellar protein export ATPase FliI compare
A4249_RS11490 +0.3 1.9 sensor histidine kinase N-terminal domain-containing protein compare
A4249_RS15805 +0.3 2.0 MarR family transcriptional regulator compare
A4249_RS14585 +0.3 1.8 glucose-6-phosphate isomerase compare
A4249_RS10130 +0.3 1.3 DUF3168 domain-containing protein compare
A4249_RS01465 +0.3 1.1 hypothetical protein compare
A4249_RS15285 +0.3 1.3 hypothetical protein compare
A4249_RS07145 +0.3 0.9 hypothetical protein compare
A4249_RS00410 +0.3 1.6 OmpA family protein compare
A4249_RS06530 +0.3 1.6 PQ-loop domain-containing transporter compare
A4249_RS09550 +0.3 1.5 AMP-binding protein compare
A4249_RS09340 +0.3 2.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPB compare
A4249_RS16630 +0.3 0.6 DUF2474 family protein compare
A4249_RS12760 +0.3 1.3 hypothetical protein compare
A4249_RS04190 +0.3 1.0 MliC family protein compare
A4249_RS10955 +0.3 1.7 DNA polymerase III subunit epsilon compare
A4249_RS03235 +0.3 1.4 copper homeostasis membrane protein CopD compare
A4249_RS04450 +0.3 0.9 cytochrome o ubiquinol oxidase subunit I compare
A4249_RS10790 +0.3 1.2 RNA polymerase sigma factor compare
A4249_RS16025 +0.3 1.8 flagellar basal body rod protein FlgC compare
A4249_RS16165 +0.3 1.2 homoserine O-succinyltransferase compare
A4249_RS12225 +0.3 0.7 SDR family oxidoreductase compare
A4249_RS10950 +0.3 1.6 DUF1345 domain-containing protein compare
A4249_RS02670 +0.3 1.6 enoyl-CoA hydratase compare
A4249_RS15010 +0.3 1.6 methyl-accepting chemotaxis protein compare
A4249_RS05885 +0.3 1.2 cold-shock protein compare
A4249_RS03415 +0.3 1.6 TetR/AcrR family transcriptional regulator compare
A4249_RS09315 +0.3 1.0 class 1 fructose-bisphosphatase compare
A4249_RS00090 +0.3 1.3 DUF2807 domain-containing protein compare
A4249_RS05705 +0.3 1.3 ATP-binding cassette domain-containing protein compare
A4249_RS04785 +0.3 1.8 YihY/virulence factor BrkB family protein compare
A4249_RS00040 +0.3 1.9 neutral zinc metallopeptidase compare
A4249_RS15140 +0.3 0.8 TraB/GumN family protein compare
A4249_RS11400 +0.3 0.8 GNAT family N-acetyltransferase compare
A4249_RS14545 +0.3 1.0 metallophosphoesterase compare
A4249_RS13565 +0.3 1.5 carbon-nitrogen hydrolase family protein compare
A4249_RS00120 +0.3 1.3 cytochrome c oxidase assembly protein compare
A4249_RS08325 +0.3 1.7 ribonuclease R compare
A4249_RS09960 +0.3 1.4 LacI family DNA-binding transcriptional regulator compare
A4249_RS17065 +0.3 1.0 methyltransferase domain-containing protein compare
A4249_RS02300 +0.3 1.1 rhomboid family intramembrane serine protease compare
A4249_RS01965 +0.3 0.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
A4249_RS05035 +0.2 0.9 Mrp/NBP35 family ATP-binding protein compare
A4249_RS10110 +0.2 0.8 DUF805 domain-containing protein compare
A4249_RS02900 +0.2 1.3 hypothetical protein compare
A4249_RS00190 +0.2 1.7 DUF1501 domain-containing protein compare
A4249_RS04645 +0.2 1.4 5'/3'-nucleotidase SurE compare
A4249_RS07955 +0.2 2.2 MBL fold metallo-hydrolase compare
A4249_RS10425 +0.2 1.6 RNA methyltransferase compare


Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Hypoxanthine across organisms