Experiment set2S15 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Guanosine 0.35306 mM carbon source

200 most important genes:

  gene name fitness t score description  
A4249_RS01230 -2.2 -2.3 hypothetical protein compare
A4249_RS11720 -2.1 -1.9 strawberry notch C-terminal domain-containing protein compare
A4249_RS10105 -2.1 -1.9 DUF2460 domain-containing protein compare
A4249_RS07910 -1.9 -2.1 2-hydroxyacid dehydrogenase compare
A4249_RS05485 -1.9 -2.9 uracil-DNA glycosylase compare
A4249_RS13560 -1.8 -3.4 glutaredoxin 3 compare
A4249_RS01590 -1.8 -2.0 site-specific DNA-methyltransferase compare
A4249_RS16155 -1.7 -1.8 tRNA-Glu compare
A4249_RS13805 -1.7 -1.6 HAD family hydrolase compare
A4249_RS09035 -1.5 -1.8 redox-regulated ATPase YchF compare
A4249_RS01610 -1.5 -1.4 TetR/AcrR family transcriptional regulator compare
A4249_RS11150 -1.4 -6.2 capsular biosynthesis protein compare
A4249_RS16585 -1.4 -3.7 hypothetical protein compare
A4249_RS09255 -1.3 -0.9 phosphoribosylamine--glycine ligase compare
A4249_RS04085 -1.3 -2.4 ribonuclease E/G compare
A4249_RS09265 -1.3 -1.9 exodeoxyribonuclease VII large subunit compare
A4249_RS15865 -1.3 -1.6 Holliday junction branch migration DNA helicase RuvB compare
A4249_RS13200 -1.3 -2.6 thiamine pyrophosphate-dependent enzyme compare
A4249_RS14205 -1.2 -2.0 response regulator compare
A4249_RS10815 -1.2 -2.3 Do family serine endopeptidase compare
A4249_RS03170 -1.2 -2.2 hypothetical protein compare
A4249_RS08510 -1.2 -2.5 hypothetical protein compare
A4249_RS12295 -1.2 -2.7 trehalose-phosphatase compare
A4249_RS12085 -1.1 -2.1 DUF883 family protein compare
A4249_RS03370 -1.1 -1.2 copper-binding protein compare
A4249_RS11290 -1.1 -2.4 double-strand break repair helicase AddA compare
A4249_RS08270 -1.1 -2.3 DedA family protein compare
A4249_RS06665 -1.1 -1.7 endonuclease/exonuclease/phosphatase family protein compare
A4249_RS00145 -1.0 -1.5 SURF1 family protein compare
A4249_RS01555 -1.0 -1.8 response regulator compare
A4249_RS06370 -1.0 -1.2 hypothetical protein compare
A4249_RS00720 -1.0 -0.9 DUF1294 domain-containing protein compare
A4249_RS00895 -0.9 -1.7 DUF1476 domain-containing protein compare
A4249_RS10480 -0.9 -1.3 DUF1190 domain-containing protein compare
A4249_RS11125 -0.9 -7.2 glycosyltransferase family 9 protein compare
A4249_RS17075 -0.9 -1.1 energy transducer TonB compare
A4249_RS01010 -0.9 -4.5 capsular polysaccharide biosynthesis protein compare
A4249_RS08855 -0.9 -2.0 L,D-transpeptidase family protein compare
A4249_RS01460 -0.8 -1.4 signal peptide peptidase SppA compare
A4249_RS08725 -0.8 -2.9 hypothetical protein compare
A4249_RS12860 -0.8 -1.4 DUF350 domain-containing protein compare
A4249_RS05845 -0.8 -1.6 sigma-70 family RNA polymerase sigma factor compare
A4249_RS13125 -0.8 -1.2 ribonuclease PH compare
A4249_RS09210 -0.8 -1.9 hypothetical protein compare
A4249_RS07105 -0.8 -1.1 hypothetical protein compare
A4249_RS15470 -0.8 -1.2 cold-shock protein compare
A4249_RS08535 -0.8 -1.1 flagellar assembly protein FliX compare
A4249_RS12210 -0.8 -1.2 tyrosine recombinase XerC compare
A4249_RS14135 -0.7 -1.0 ATP-binding protein compare
A4249_RS04190 -0.7 -2.2 MliC family protein compare
A4249_RS01725 -0.7 -1.3 hypothetical protein compare
A4249_RS09405 -0.7 -1.2 beta-N-acetylhexosaminidase compare
A4249_RS06230 -0.7 -1.1 OmpH family outer membrane protein compare
A4249_RS11285 -0.7 -1.4 double-strand break repair protein AddB compare
A4249_RS13060 -0.7 -5.0 AGE family epimerase/isomerase compare
A4249_RS05620 -0.7 -2.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
A4249_RS14840 -0.7 -2.4 carboxynorspermidine decarboxylase compare
A4249_RS04215 -0.6 -1.0 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
A4249_RS01090 -0.6 -0.9 sigma-70 family RNA polymerase sigma factor compare
A4249_RS07995 -0.6 -1.1 type II 3-dehydroquinate dehydratase compare
A4249_RS06680 -0.6 -1.3 tipN compare
A4249_RS01315 -0.6 -1.2 hypothetical protein compare
A4249_RS09275 -0.6 -2.4 DUF3035 domain-containing protein compare
A4249_RS11930 -0.6 -1.7 YcxB family protein compare
A4249_RS16725 -0.6 -0.7 hypothetical protein compare
A4249_RS07865 -0.6 -1.8 RluA family pseudouridine synthase compare
A4249_RS05595 -0.6 -1.3 dicarboxylate/amino acid:cation symporter compare
A4249_RS10785 -0.6 -0.8 hypothetical protein compare
A4249_RS02765 -0.6 -1.1 hypothetical protein compare
A4249_RS04840 -0.6 -2.3 Na+/H+ antiporter compare
A4249_RS08705 -0.6 -2.7 response regulator compare
A4249_RS15415 -0.6 -1.6 hypothetical protein compare
A4249_RS13960 -0.6 -0.9 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB compare
A4249_RS00990 -0.6 -2.3 hypothetical protein compare
A4249_RS13345 -0.6 -1.5 tRNA pseudouridine(55) synthase TruB compare
A4249_RS12445 -0.6 -2.8 radical SAM family heme chaperone HemW compare
A4249_RS01650 -0.6 -0.8 DUF1289 domain-containing protein compare
A4249_RS13030 -0.6 -3.4 glycosyltransferase family 1 protein compare
A4249_RS05625 -0.6 -4.5 ADP-glyceromanno-heptose 6-epimerase compare
A4249_RS13545 -0.6 -1.5 Flp family type IVb pilin compare
A4249_RS08805 -0.5 -2.9 HAMP domain-containing sensor histidine kinase compare
A4249_RS16555 -0.5 -1.4 hypothetical protein compare
A4249_RS07015 -0.5 -0.6 hypothetical protein compare
A4249_RS00235 -0.5 -1.9 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS12680 -0.5 -2.3 YbjN domain-containing protein compare
A4249_RS00100 -0.5 -0.8 PadR family transcriptional regulator compare
A4249_RS15590 -0.5 -2.1 chemotaxis protein CheD compare
A4249_RS13070 -0.5 -3.4 phosphomannomutase/phosphoglucomutase compare
A4249_RS12305 -0.5 -1.6 glycosyltransferase family 1 protein compare
A4249_RS12260 -0.5 -0.9 3-hydroxybutyryl-CoA dehydrogenase compare
A4249_RS07405 -0.5 -1.3 hypothetical protein compare
A4249_RS02485 -0.5 -1.8 methylmalonyl-CoA mutase family protein compare
A4249_RS10185 -0.5 -2.0 hypothetical protein compare
A4249_RS10295 -0.5 -0.7 hypothetical protein compare
A4249_RS00880 -0.5 -2.2 YbhB/YbcL family Raf kinase inhibitor-like protein compare
A4249_RS05900 -0.5 -0.8 hypothetical protein compare
A4249_RS04620 -0.5 -1.2 hypothetical protein compare
A4249_RS10835 -0.5 -1.3 c-type cytochrome biogenesis protein CcmI compare
A4249_RS02825 -0.5 -2.3 heat shock protein HspQ compare
A4249_RS00685 -0.5 -2.1 hypothetical protein compare
A4249_RS13025 -0.5 -3.3 hypothetical protein compare
A4249_RS14190 -0.5 -1.8 hypothetical protein compare
A4249_RS01340 -0.5 -1.7 phosphoadenosine phosphosulfate reductase family protein compare
A4249_RS14825 -0.5 -1.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
A4249_RS11645 -0.5 -1.7 helix-turn-helix domain-containing protein compare
A4249_RS02820 -0.5 -0.7 Ppx/GppA phosphatase family protein compare
A4249_RS13535 -0.4 -1.8 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
A4249_RS16685 -0.4 -0.5 tRNA-Arg compare
A4249_RS04240 -0.4 -2.2 DNA-processing protein DprA compare
A4249_RS13310 -0.4 -1.9 transglutaminase family protein compare
A4249_RS12970 -0.4 -1.0 glycosyltransferase family 61 protein compare
A4249_RS13495 -0.4 -1.5 organic hydroperoxide resistance protein compare
A4249_RS14360 -0.4 -1.0 pilus assembly protein compare
A4249_RS01000 -0.4 -2.1 DoxX family protein compare
A4249_RS14105 -0.4 -1.1 hypothetical protein compare
A4249_RS06985 -0.4 -0.4 hypothetical protein compare
A4249_RS07150 -0.4 -3.0 hypothetical protein compare
A4249_RS16565 -0.4 -1.0 hypothetical protein compare
A4249_RS09515 -0.4 -0.8 hypothetical protein compare
A4249_RS13745 -0.4 -1.9 DUF3576 domain-containing protein compare
A4249_RS01135 -0.4 -1.3 DsbA family protein compare
A4249_RS06895 -0.4 -1.5 hypothetical protein compare
A4249_RS15645 -0.4 -1.4 potassium-transporting ATPase subunit KdpB compare
A4249_RS11465 -0.4 -2.0 Cys-tRNA(Pro) deacylase compare
A4249_RS09800 -0.4 -1.7 DUF3253 domain-containing protein compare
A4249_RS13080 -0.4 -1.8 Crp/Fnr family transcriptional regulator compare
A4249_RS07645 -0.4 -1.0 fumarylacetoacetate hydrolase family protein compare
A4249_RS09940 -0.4 -2.5 sugar MFS transporter compare
A4249_RS12570 -0.4 -1.3 hypothetical protein compare
A4249_RS15345 -0.4 -1.2 DUF6491 family protein compare
A4249_RS12375 -0.4 -1.0 hypothetical protein compare
A4249_RS14895 -0.4 -1.0 phosphonate ABC transporter, permease protein PhnE compare
A4249_RS08730 -0.4 -2.5 hypothetical protein compare
A4249_RS16570 -0.4 -1.2 hypothetical protein compare
A4249_RS08865 -0.4 -0.6 DUF1192 domain-containing protein compare
A4249_RS00975 -0.4 -1.8 DUF559 domain-containing protein compare
A4249_RS03225 -0.4 -1.3 hypothetical protein compare
A4249_RS15570 -0.4 -1.1 chemotaxis protein CheW compare
A4249_RS12980 -0.4 -3.2 GDP-mannose 4,6-dehydratase compare
A4249_RS12465 -0.4 -2.3 helix-turn-helix transcriptional regulator compare
A4249_RS05745 -0.4 -1.4 ImmA/IrrE family metallo-endopeptidase compare
A4249_RS06000 -0.4 -1.9 hypothetical protein compare
A4249_RS15180 -0.4 -1.9 hypothetical protein compare
A4249_RS04510 -0.4 -1.0 polymer-forming cytoskeletal protein compare
A4249_RS04780 -0.4 -1.9 diguanylate cyclase compare
A4249_RS00125 -0.4 -1.6 NUDIX domain-containing protein compare
A4249_RS04625 -0.4 -2.2 50S ribosomal protein L11 methyltransferase compare
A4249_RS15235 -0.4 -1.0 flagellar biosynthesis protein FlhB compare
A4249_RS14605 -0.4 -1.4 glycosyltransferase family 2 protein compare
A4249_RS05385 -0.4 -1.9 DUF1810 domain-containing protein compare
A4249_RS06095 -0.4 -1.5 patatin-like phospholipase family protein compare
A4249_RS02180 -0.4 -1.5 hypothetical protein compare
A4249_RS10315 -0.4 -2.2 response regulator transcription factor compare
A4249_RS16625 -0.4 -1.5 hypothetical protein compare
A4249_RS09055 -0.4 -1.4 hypothetical protein compare
A4249_RS00395 -0.4 -1.3 DUF2975 domain-containing protein compare
A4249_RS09605 -0.3 -0.6 DUF6468 domain-containing protein compare
A4249_RS09785 -0.3 -1.3 flagellar basal-body MS-ring/collar protein FliF compare
A4249_RS10630 -0.3 -1.0 FAD:protein FMN transferase compare
A4249_RS13190 -0.3 -1.0 2-oxo acid dehydrogenase subunit E2 compare
A4249_RS07140 -0.3 -2.3 hypothetical protein compare
A4249_RS12710 -0.3 -2.3 hypothetical protein compare
A4249_RS08740 -0.3 -1.9 SH3 domain-containing protein compare
A4249_RS15410 -0.3 -0.8 hypothetical protein compare
A4249_RS10500 -0.3 -0.8 PspA/IM30 family protein compare
A4249_RS07655 -0.3 -2.3 RpiB/LacA/LacB family sugar-phosphate isomerase compare
A4249_RS13195 -0.3 -1.1 alpha-ketoacid dehydrogenase subunit beta compare
A4249_RS12390 -0.3 -1.0 ATP-dependent protease subunit HslV compare
A4249_RS06690 -0.3 -0.8 DUF423 domain-containing protein compare
A4249_RS03175 -0.3 -1.5 ParB N-terminal domain-containing protein compare
A4249_RS15090 -0.3 -1.6 NAD(+) diphosphatase compare
A4249_RS11905 -0.3 -0.6 hypothetical protein compare
A4249_RS12130 -0.3 -2.0 hypothetical protein compare
A4249_RS15505 -0.3 -1.6 DUF3617 family protein compare
A4249_RS11425 -0.3 -0.9 ATP-binding cassette domain-containing protein compare
A4249_RS05045 -0.3 -1.9 YbjQ family protein compare
A4249_RS15980 -0.3 -1.2 multidrug efflux SMR transporter compare
A4249_RS17045 -0.3 -1.6 hypothetical protein compare
A4249_RS06485 -0.3 -1.0 hypothetical protein compare
A4249_RS09735 -0.3 -1.2 NUDIX domain-containing protein compare
A4249_RS08495 -0.3 -0.5 Na+/H+ antiporter subunit E compare
A4249_RS15015 -0.3 -1.5 chemotaxis protein CheW compare
A4249_RS16205 -0.3 -1.7 IS6 family transposase compare
A4249_RS03685 -0.3 -1.7 sigma-70 family RNA polymerase sigma factor compare
A4249_RS15270 -0.3 -1.4 hypothetical protein compare
A4249_RS13590 -0.3 -1.5 [protein-PII] uridylyltransferase compare
A4249_RS02650 -0.3 -0.8 hypothetical protein compare
A4249_RS13980 -0.3 -1.7 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
A4249_RS03310 -0.3 -1.6 RNA polymerase sigma factor compare
A4249_RS10540 -0.3 -1.0 DEAD/DEAH box helicase compare
A4249_RS01125 -0.3 -1.0 hypothetical protein compare
A4249_RS08960 -0.3 -1.9 hypothetical protein compare
A4249_RS16365 -0.3 -1.2 DUF393 domain-containing protein compare
A4249_RS13450 -0.3 -0.7 PilZ domain-containing protein compare
A4249_RS13625 -0.3 -1.1 alpha-ketoglutarate-dependent dioxygenase AlkB compare
A4249_RS11730 -0.3 -1.4 DUF305 domain-containing protein compare
A4249_RS06920 -0.3 -0.8 hypothetical protein compare
A4249_RS07610 -0.3 -0.5 methyltransferase type 11 compare
A4249_RS12520 -0.3 -1.1 UrcA family protein compare
A4249_RS01850 -0.3 -2.0 IS6 family transposase compare


Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Guanosine across organisms