Experiment set2S15 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Guanosine 0.35306 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
A4249_RS12470 +1.3 3.1 histidinol-phosphatase compare
A4249_RS12640 +1.3 2.5 hypothetical protein compare
A4249_RS12930 +1.2 3.8 HAD-IA family hydrolase compare
A4249_RS05505 +1.1 4.8 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
A4249_RS08595 +1.1 4.2 ABC transporter ATP-binding protein compare
A4249_RS08585 +0.9 4.1 ABC-type transport auxiliary lipoprotein family protein compare
A4249_RS00980 +0.9 8.6 pyruvate, phosphate dikinase compare
A4249_RS07895 +0.9 2.1 VOC family protein compare
A4249_RS14255 +0.8 1.4 ribonuclease P protein component compare
A4249_RS17085 +0.8 2.0 sugar O-acetyltransferase compare
A4249_RS13640 +0.8 2.0 molecular chaperone DnaJ compare
A4249_RS14585 +0.8 5.4 glucose-6-phosphate isomerase compare
A4249_RS01415 +0.8 2.0 phage Gp37/Gp68 family protein compare
A4249_RS08395 +0.8 3.8 ATP-dependent Clp protease adapter ClpS compare
A4249_RS09115 +0.8 2.3 sigma-54 dependent transcriptional regulator compare
A4249_RS12480 +0.8 6.6 alpha/beta hydrolase compare
A4249_RS11460 +0.8 2.9 DUF2125 domain-containing protein compare
A4249_RS13220 +0.7 3.0 monofunctional biosynthetic peptidoglycan transglycosylase compare
A4249_RS04485 +0.7 1.4 phage holin family protein compare
A4249_RS14060 +0.7 1.9 YidB family protein compare
A4249_RS10095 +0.7 1.3 NlpC/P60 family protein compare
A4249_RS07030 +0.7 2.9 hypothetical protein compare
A4249_RS08590 +0.7 3.5 MlaD family protein compare
A4249_RS12755 +0.7 2.2 hydrogen peroxide-inducible genes activator compare
A4249_RS15325 +0.7 5.2 long-chain-acyl-CoA synthetase compare
A4249_RS08350 +0.7 3.7 PleD family two-component system response regulator compare
A4249_RS14785 +0.6 6.2 response regulator compare
A4249_RS08530 +0.6 3.3 RNA polymerase-binding protein DksA compare
A4249_RS04490 +0.6 1.7 cobaltochelatase subunit CobS compare
A4249_RS08285 +0.6 1.4 preQ(1) synthase compare
A4249_RS01235 +0.6 1.2 hypothetical protein compare
A4249_RS08515 +0.6 4.2 TIGR00730 family Rossman fold protein compare
A4249_RS03060 +0.6 1.7 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS13175 +0.6 1.0 Rrf2 family transcriptional regulator compare
A4249_RS11660 +0.6 2.8 mercury resistance system transport protein MerF compare
A4249_RS15110 +0.6 1.9 YbaB/EbfC family nucleoid-associated protein compare
A4249_RS09350 +0.6 1.4 PGPGW domain-containing protein compare
A4249_RS06440 +0.6 3.8 glycosyltransferase compare
A4249_RS06240 +0.6 3.4 M50 family metallopeptidase compare
A4249_RS11180 +0.6 2.2 YqaA family protein compare
A4249_RS10125 +0.6 1.1 phage major tail protein, TP901-1 family compare
A4249_RS10365 +0.6 1.6 hypothetical protein compare
A4249_RS08640 +0.5 1.7 DUF1153 domain-containing protein compare
A4249_RS14065 +0.5 1.9 MFS transporter compare
A4249_RS05730 +0.5 1.7 uracil-DNA glycosylase compare
A4249_RS08380 +0.5 2.1 RidA family protein compare
A4249_RS11570 +0.5 1.9 YeeE/YedE thiosulfate transporter family protein compare
A4249_RS12200 +0.5 2.8 fructose-6-phosphate aldolase compare
A4249_RS09315 +0.5 1.8 class 1 fructose-bisphosphatase compare
A4249_RS05300 +0.5 1.2 hypothetical protein compare
A4249_RS04475 +0.5 1.2 response regulator transcription factor compare
A4249_RS10550 +0.5 1.2 winged helix-turn-helix transcriptional regulator compare
A4249_RS14775 +0.5 4.7 sigma-70 family RNA polymerase sigma factor compare
A4249_RS11575 +0.5 1.6 YeeE/YedE family protein compare
A4249_RS08010 +0.5 2.6 leucyl/phenylalanyl-tRNA--protein transferase compare
A4249_RS09640 +0.5 2.3 hypothetical protein compare
A4249_RS00165 +0.5 2.2 SDR family oxidoreductase compare
A4249_RS15245 +0.5 2.3 protein-glutamate O-methyltransferase CheR compare
A4249_RS07810 +0.5 2.5 hypothetical protein compare
A4249_RS07830 +0.5 2.2 FAD-binding oxidoreductase compare
A4249_RS06970 +0.5 1.5 hypothetical protein compare
A4249_RS02785 +0.5 2.0 DUF1003 domain-containing protein compare
A4249_RS14485 +0.5 1.9 phosphoenolpyruvate--protein phosphotransferase compare
A4249_RS06670 +0.5 3.2 phospholipase D-like domain-containing protein compare
A4249_RS08375 +0.5 1.1 hypothetical protein compare
A4249_RS15765 +0.5 3.1 ribokinase compare
A4249_RS15250 +0.5 2.8 response regulator compare
A4249_RS03690 +0.5 1.1 hypothetical protein compare
A4249_RS08520 +0.5 1.0 hypothetical protein compare
A4249_RS15560 +0.5 1.1 response regulator compare
A4249_RS01480 +0.5 1.7 cell division protein MraZ compare
A4249_RS10585 +0.5 1.2 extensin family protein compare
A4249_RS11795 +0.5 0.9 DUF2493 domain-containing protein compare
A4249_RS08390 +0.5 3.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
A4249_RS11825 +0.4 0.8 DUF6521 family protein compare
A4249_RS12225 +0.4 1.1 SDR family oxidoreductase compare
A4249_RS16615 +0.4 1.2 hypothetical protein compare
A4249_RS11675 +0.4 1.0 hypothetical protein compare
A4249_RS12315 +0.4 0.9 hypothetical protein compare
A4249_RS00800 +0.4 2.1 5-formyltetrahydrofolate cyclo-ligase compare
A4249_RS12450 +0.4 2.7 GNAT family N-acetyltransferase compare
A4249_RS12830 +0.4 1.0 YkvA family protein compare
A4249_RS00135 +0.4 2.3 cytochrome c oxidase subunit 3 compare
A4249_RS06505 +0.4 1.6 MBL fold metallo-hydrolase compare
A4249_RS10140 +0.4 2.1 head-tail connector protein compare
A4249_RS16280 +0.4 1.4 general stress protein compare
A4249_RS16540 +0.4 1.5 hypothetical protein compare
A4249_RS06325 +0.4 1.5 ribonuclease J compare
A4249_RS16590 +0.4 1.2 hypothetical protein compare
A4249_RS16165 +0.4 1.9 homoserine O-succinyltransferase compare
A4249_RS06555 +0.4 1.8 Hpt domain-containing protein compare
A4249_RS15715 +0.4 3.4 phosphomethylpyrimidine synthase ThiC compare
A4249_RS10245 +0.4 1.8 MucR family transcriptional regulator compare
A4249_RS11365 +0.4 1.1 cation diffusion facilitator family transporter compare
A4249_RS12420 +0.4 2.1 TetR/AcrR family transcriptional regulator compare
A4249_RS15825 +0.4 1.6 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS15360 +0.4 0.9 DNA replication/repair protein RecF compare
A4249_RS08785 +0.4 2.0 DnaJ C-terminal domain-containing protein compare
A4249_RS16455 +0.4 0.8 helix-turn-helix transcriptional regulator compare
A4249_RS02725 +0.4 1.7 hypothetical protein compare
A4249_RS15820 +0.4 1.9 arsenate reductase (glutaredoxin) compare
A4249_RS02220 +0.4 1.0 MaoC family dehydratase compare
A4249_RS03230 +0.4 1.1 copper homeostasis periplasmic binding protein CopC compare
A4249_RS03135 +0.4 1.1 TolC family protein compare
A4249_RS00120 +0.4 2.0 cytochrome c oxidase assembly protein compare
A4249_RS11780 +0.4 0.5 hypothetical protein compare
A4249_RS10160 +0.4 1.0 HK97 family phage prohead protease compare
A4249_RS00485 +0.4 2.1 thioesterase family protein compare
A4249_RS00040 +0.4 3.0 neutral zinc metallopeptidase compare
A4249_RS14395 +0.4 1.1 hypothetical protein compare
A4249_RS08580 +0.4 1.9 hypothetical protein compare
A4249_RS02640 +0.4 0.9 hypothetical protein compare
A4249_RS10385 +0.4 2.3 DNA damage-inducible protein D compare
A4249_RS16780 +0.4 2.0 HNH endonuclease compare
A4249_RS11650 +0.4 1.5 mercuric transporter MerT family protein compare
A4249_RS04785 +0.4 2.4 YihY/virulence factor BrkB family protein compare
A4249_RS09250 +0.4 1.6 murein L,D-transpeptidase catalytic domain family protein compare
A4249_RS11875 +0.4 1.7 trimeric intracellular cation channel family protein compare
A4249_RS16695 +0.4 1.2 potassium-transporting ATPase subunit F compare
A4249_RS13335 +0.4 1.6 DUF2459 domain-containing protein compare
A4249_RS09775 +0.4 1.7 flagellar assembly protein FlbE compare
A4249_RS00060 +0.4 1.3 fatty acid desaturase compare
A4249_RS09335 +0.4 2.5 aminomethyl-transferring glycine dehydrogenase subunit GcvPA compare
A4249_RS09645 +0.4 1.4 hypothetical protein compare
A4249_RS01545 +0.4 1.9 thioredoxin domain-containing protein compare
A4249_RS04790 +0.4 1.3 sulfurtransferase TusA family protein compare
A4249_RS08220 +0.4 0.9 phosphoribosylglycinamide formyltransferase compare
A4249_RS14805 +0.4 1.6 Fur family transcriptional regulator compare
A4249_RS04880 +0.4 2.1 AMP-binding protein compare
A4249_RS10110 +0.4 0.8 DUF805 domain-containing protein compare
A4249_RS13375 +0.4 1.7 DUF1176 domain-containing protein compare
A4249_RS05940 +0.4 2.9 COX15/CtaA family protein compare
A4249_RS04480 +0.4 0.7 HIT family protein compare
A4249_RS11560 +0.4 0.6 peroxiredoxin compare
A4249_RS03300 +0.3 0.6 copper resistance protein CopC compare
A4249_RS00075 +0.3 1.7 alpha/beta hydrolase compare
A4249_RS00790 +0.3 1.0 cell division protein ZapA compare
A4249_RS05880 +0.3 1.4 DUF192 domain-containing protein compare
A4249_RS04145 +0.3 1.8 response regulator compare
A4249_RS04125 +0.3 0.9 mechanosensitive ion channel family protein compare
A4249_RS02845 +0.3 1.4 succinylglutamate-semialdehyde dehydrogenase compare
A4249_RS13155 +0.3 2.3 heparinase II/III family protein compare
A4249_RS01310 +0.3 1.1 hypothetical protein compare
A4249_RS00530 +0.3 2.4 outer membrane protein transport protein compare
A4249_RS11265 +0.3 2.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
A4249_RS07365 +0.3 2.1 lysozyme compare
A4249_RS14700 +0.3 0.7 helix-turn-helix transcriptional regulator compare
A4249_RS01905 +0.3 0.7 TrbC/VirB2 family protein compare
A4249_RS08550 +0.3 0.5 flagellar basal-body protein FlbY compare
A4249_RS10425 +0.3 2.2 RNA methyltransferase compare
A4249_RS01675 +0.3 0.8 DMT family transporter compare
A4249_RS04050 +0.3 2.2 LysR substrate-binding domain-containing protein compare
A4249_RS06530 +0.3 1.8 PQ-loop domain-containing transporter compare
A4249_RS07760 +0.3 1.5 A24 family peptidase compare
A4249_RS04795 +0.3 1.3 CinA family protein compare
A4249_RS01465 +0.3 0.9 hypothetical protein compare
A4249_RS01405 +0.3 1.2 hypothetical protein compare
A4249_RS05310 +0.3 2.1 glycosyltransferase family 2 protein compare
A4249_RS13305 +0.3 1.4 YraN family protein compare
A4249_RS14975 +0.3 1.3 creatininase family protein compare
A4249_RS11680 +0.3 1.8 7-cyano-7-deazaguanine synthase compare
A4249_RS00020 +0.3 2.3 threonine synthase compare
A4249_RS10955 +0.3 1.6 DNA polymerase III subunit epsilon compare
A4249_RS00185 +0.3 1.8 SulP family inorganic anion transporter compare
A4249_RS10290 +0.3 1.8 flagellar protein export ATPase FliI compare
A4249_RS11215 +0.3 1.3 isoaspartyl peptidase/L-asparaginase compare
A4249_RS11400 +0.3 0.9 GNAT family N-acetyltransferase compare
A4249_RS09165 +0.3 1.5 aldo/keto reductase compare
A4249_RS00195 +0.3 2.1 DUF1800 domain-containing protein compare
A4249_RS12275 +0.3 1.3 cobaltochelatase subunit CobT compare
A4249_RS08405 +0.3 1.0 TIGR01841 family phasin compare
A4249_RS16630 +0.3 0.6 DUF2474 family protein compare
A4249_RS08300 +0.3 0.6 cold-shock protein compare
A4249_RS08025 +0.3 0.8 DUF2155 domain-containing protein compare
A4249_RS09685 +0.3 2.1 NYN domain-containing protein compare
A4249_RS14245 +0.3 2.5 TVP38/TMEM64 family protein compare
A4249_RS05320 +0.3 1.4 acyl-CoA dehydrogenase family protein compare
A4249_RS11055 +0.3 2.6 NAD-dependent epimerase/dehydratase family protein compare
A4249_RS04200 +0.3 1.4 pseudouridine synthase compare
A4249_RS00710 +0.3 1.0 hypothetical protein compare
A4249_RS07955 +0.3 2.6 MBL fold metallo-hydrolase compare
A4249_RS09320 +0.3 1.9 alpha/beta hydrolase compare
A4249_RS12635 +0.3 1.0 phosphatase PAP2 family protein compare
A4249_RS05405 +0.3 1.0 hypothetical protein compare
A4249_RS12140 +0.3 1.0 ATP-binding protein compare
A4249_RS08330 +0.3 1.4 NUDIX domain-containing protein compare
A4249_RS17005 +0.3 0.9 glucokinase compare
A4249_RS14025 +0.3 0.5 CHAP domain-containing protein compare
A4249_RS03495 +0.3 2.0 type 1 glutamine amidotransferase domain-containing protein compare
A4249_RS09990 +0.3 2.1 ammonium transporter compare
A4249_RS14985 +0.3 1.1 DHA2 family efflux MFS transporter permease subunit compare
A4249_RS07120 +0.3 0.8 hypothetical protein compare
A4249_RS15265 +0.3 1.3 hypothetical protein compare
A4249_RS04405 +0.3 1.7 sterol desaturase family protein compare
A4249_RS00200 +0.3 1.9 metal-dependent hydrolase compare
A4249_RS02290 +0.3 2.4 holdfast anchoring protein HfaB compare
A4249_RS14480 +0.3 1.7 helix-turn-helix domain-containing protein compare
A4249_RS14680 +0.3 0.9 PAS domain-containing sensor histidine kinase compare
A4249_RS13205 +0.3 1.7 Lrp/AsnC family transcriptional regulator compare
A4249_RS12915 +0.3 0.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Guanosine across organisms