Experiment set2S12 for Brevundimonas sp. GW460-12-10-14-LB2

200 most important genes:

gene	name	fitness	t score	description
A4249_RS01590		-2.4	-2.8	site-specific DNA-methyltransferase
A4249_RS01460		-1.8	-2.4	signal peptide peptidase SppA
A4249_RS16585		-1.3	-3.2	hypothetical protein
A4249_RS12210		-1.1	-2.6	tyrosine recombinase XerC
A4249_RS06665		-1.0	-1.5	endonuclease/exonuclease/phosphatase family protein
A4249_RS07610		-1.0	-1.6	methyltransferase type 11
A4249_RS10785		-0.9	-1.7	hypothetical protein
A4249_RS11805		-0.9	-1.6	SOS response-associated peptidase
A4249_RS10990		-0.8	-1.3	ATP-dependent protease ATPase subunit HslU
A4249_RS12260		-0.8	-1.9	3-hydroxybutyryl-CoA dehydrogenase
A4249_RS05620		-0.8	-4.4	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase
A4249_RS00305		-0.8	-2.2	DUF4908 domain-containing protein
A4249_RS11125		-0.8	-5.6	glycosyltransferase family 9 protein
A4249_RS15360		-0.7	-1.7	DNA replication/repair protein RecF
A4249_RS00290		-0.7	-1.1	histidine phosphatase family protein
A4249_RS09275		-0.7	-3.1	DUF3035 domain-containing protein
A4249_RS10965		-0.7	-1.1	response regulator
A4249_RS12305		-0.7	-2.4	glycosyltransferase family 1 protein
A4249_RS06435		-0.7	-1.1	tRNA-Asp
A4249_RS09330		-0.7	-1.4	glycine cleavage system protein GcvH
A4249_RS12390		-0.7	-2.0	ATP-dependent protease subunit HslV
A4249_RS02165		-0.7	-1.0	c-type cytochrome
A4249_RS13450		-0.7	-2.3	PilZ domain-containing protein
A4249_RS13060		-0.6	-5.4	AGE family epimerase/isomerase
A4249_RS08375		-0.6	-1.4	hypothetical protein
A4249_RS11150		-0.6	-3.9	capsular biosynthesis protein
A4249_RS06165		-0.6	-2.7	aminodeoxychorismate/anthranilate synthase component II
A4249_RS03065		-0.6	-1.8	arsenate reductase (glutaredoxin)
A4249_RS13025		-0.6	-4.8	hypothetical protein
A4249_RS13045		-0.6	-4.9	glycosyltransferase family 1 protein
A4249_RS12980		-0.6	-5.4	GDP-mannose 4,6-dehydratase
A4249_RS13175		-0.6	-1.1	Rrf2 family transcriptional regulator
A4249_RS04765		-0.6	-2.6	ATP-dependent DNA helicase RecG
A4249_RS05625		-0.5	-4.6	ADP-glyceromanno-heptose 6-epimerase
A4249_RS01650		-0.5	-0.6	DUF1289 domain-containing protein
A4249_RS01220		-0.5	-2.1	hypothetical protein
A4249_RS13030		-0.5	-3.7	glycosyltransferase family 1 protein
A4249_RS08885		-0.5	-1.0	DUF465 domain-containing protein
A4249_RS12970		-0.5	-2.0	glycosyltransferase family 61 protein
A4249_RS01090		-0.5	-1.1	sigma-70 family RNA polymerase sigma factor
A4249_RS13035		-0.5	-2.9	hypothetical protein
A4249_RS05370		-0.5	-2.3	DNA polymerase Y family protein
A4249_RS07910		-0.5	-0.8	2-hydroxyacid dehydrogenase
A4249_RS13020		-0.5	-3.0	NAD-dependent epimerase/dehydratase family protein
A4249_RS15865		-0.5	-1.0	Holliday junction branch migration DNA helicase RuvB
A4249_RS13070		-0.5	-3.5	phosphomannomutase/phosphoglucomutase
A4249_RS07985		-0.5	-2.1	type II toxin-antitoxin system VapC family toxin
A4249_RS15345		-0.5	-2.2	DUF6491 family protein
A4249_RS01010		-0.5	-3.0	capsular polysaccharide biosynthesis protein
A4249_RS07190		-0.5	-2.1	hypothetical protein
A4249_RS09115		-0.5	-1.1	sigma-54 dependent transcriptional regulator
A4249_RS04510		-0.5	-1.5	polymer-forming cytoskeletal protein
A4249_RS00720		-0.5	-1.3	DUF1294 domain-containing protein
A4249_RS06485		-0.5	-2.2	hypothetical protein
A4249_RS02640		-0.4	-1.0	hypothetical protein
A4249_RS05960		-0.4	-1.7	MerR family transcriptional regulator
A4249_RS16425		-0.4	-0.5	hypothetical protein
A4249_RS14780		-0.4	-2.0	NepR family anti-sigma factor
A4249_RS02210		-0.4	-2.1	gamma carbonic anhydrase family protein
A4249_RS05160		-0.4	-1.8	response regulator
A4249_RS13195		-0.4	-1.8	alpha-ketoacid dehydrogenase subunit beta
A4249_RS14900		-0.4	-2.6	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
A4249_RS09405		-0.4	-1.1	beta-N-acetylhexosaminidase
A4249_RS05595		-0.4	-1.5	dicarboxylate/amino acid:cation symporter
A4249_RS13200		-0.4	-1.1	thiamine pyrophosphate-dependent enzyme
A4249_RS05730		-0.4	-1.3	uracil-DNA glycosylase
A4249_RS15455		-0.4	-0.6	Rieske (2Fe-2S) protein
A4249_RS10710		-0.4	-0.7	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
A4249_RS08285		-0.4	-1.1	preQ(1) synthase
A4249_RS07050		-0.4	-0.6	hypothetical protein
A4249_RS04635		-0.4	-3.7	cyclic nucleotide-binding domain-containing protein
A4249_RS12030		-0.4	-1.9	prepilin peptidase
A4249_RS08800		-0.4	-2.9	hypothetical protein
A4249_RS10935		-0.4	-1.6	hypothetical protein
A4249_RS03020		-0.4	-2.6	DUF2061 domain-containing protein
A4249_RS13560		-0.4	-1.3	glutaredoxin 3
A4249_RS10160		-0.4	-1.1	HK97 family phage prohead protease
A4249_RS04215		-0.4	-1.0	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
A4249_RS16935		-0.4	-1.2	Plug domain-containing protein
A4249_RS02555		-0.4	-1.8	tRNA (cytidine(34)-2'-O)-methyltransferase
A4249_RS08865		-0.4	-1.2	DUF1192 domain-containing protein
A4249_RS02675		-0.4	-2.1	N-acetyltransferase
A4249_RS14905		-0.4	-0.7	phosphonate ABC transporter ATP-binding protein
A4249_RS10390		-0.4	-0.9	translation elongation factor 4
A4249_RS04085		-0.3	-1.1	ribonuclease E/G
A4249_RS01285		-0.3	-1.5	head decoration protein
A4249_RS16265		-0.3	-0.7	helix-turn-helix domain-containing protein
A4249_RS07470		-0.3	-0.6	hypothetical protein
A4249_RS07995		-0.3	-0.8	type II 3-dehydroquinate dehydratase
A4249_RS14360		-0.3	-1.2	pilus assembly protein
A4249_RS14155		-0.3	-1.6	thioredoxin
A4249_RS11850		-0.3	-1.7	hypothetical protein
A4249_RS07090		-0.3	-0.8	hypothetical protein
A4249_RS14720		-0.3	-2.6	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
A4249_RS15660		-0.3	-1.1	hypothetical protein
A4249_RS10360		-0.3	-0.8	HAMP domain-containing sensor histidine kinase
A4249_RS07170		-0.3	-2.0	hypothetical protein
A4249_RS15235		-0.3	-1.1	flagellar biosynthesis protein FlhB
A4249_RS16725		-0.3	-1.1	hypothetical protein
A4249_RS09075		-0.3	-0.5	hypothetical protein
A4249_RS12400		-0.3	-0.5	hypothetical protein
A4249_RS13010		-0.3	-1.8	FkbM family methyltransferase
A4249_RS00975		-0.3	-1.6	DUF559 domain-containing protein
A4249_RS06230		-0.3	-0.7	OmpH family outer membrane protein
A4249_RS14970		-0.3	-1.6	phasin
A4249_RS16085		-0.3	-0.6	PTS IIA-like nitrogen regulatory protein PtsN
A4249_RS05285		-0.3	-1.3	hypothetical protein
A4249_RS11575		-0.3	-1.4	YeeE/YedE family protein
A4249_RS14555		-0.3	-1.8	multidrug effflux MFS transporter
A4249_RS07915		-0.3	-1.8	EF-hand domain-containing protein
A4249_RS09100		-0.3	-1.3	aa3-type cytochrome c oxidase subunit IV
A4249_RS06180		-0.3	-1.2	transcriptional repressor LexA
A4249_RS11560		-0.3	-0.6	peroxiredoxin
A4249_RS10585		-0.3	-1.0	extensin family protein
A4249_RS14805		-0.3	-1.4	Fur family transcriptional regulator
A4249_RS00700		-0.3	-1.5	hypothetical protein
A4249_RS08290		-0.3	-2.3	nitronate monooxygenase family protein
A4249_RS02300		-0.3	-1.4	rhomboid family intramembrane serine protease
A4249_RS11220		-0.3	-1.7	hypothetical protein
A4249_RS02975		-0.3	-0.9	oligosaccharide flippase family protein
A4249_RS03300		-0.3	-0.8	copper resistance protein CopC
A4249_RS13105		-0.3	-1.9	RNA polymerase sigma factor
A4249_RS00625		-0.3	-2.0	peptidase M50
A4249_RS05900		-0.3	-0.8	hypothetical protein
A4249_RS14580		-0.3	-1.1	hypothetical protein
A4249_RS01610		-0.3	-0.5	TetR/AcrR family transcriptional regulator
A4249_RS11930		-0.3	-0.8	YcxB family protein
A4249_RS07165		-0.3	-2.6	WcbI family polysaccharide biosynthesis putative acetyltransferase
A4249_RS01275		-0.3	-1.8	hypothetical protein
A4249_RS14975		-0.3	-1.4	creatininase family protein
A4249_RS10510		-0.3	-1.1	hypothetical protein
A4249_RS12220		-0.3	-1.6	retroviral-like aspartic protease family protein
A4249_RS16460		-0.3	-0.9	hypothetical protein
A4249_RS02620		-0.3	-2.0	DNA repair protein RecN
A4249_RS10915		-0.3	-0.8	hypothetical protein
A4249_RS05640		-0.3	-1.3	NfeD family protein
A4249_RS09210		-0.3	-0.6	hypothetical protein
A4249_RS08510		-0.3	-0.8	hypothetical protein
A4249_RS04955		-0.3	-1.6	DUF3606 domain-containing protein
A4249_RS11430		-0.3	-0.7	cell division protein
A4249_RS10115		-0.3	-1.1	phage tail tape measure protein
A4249_RS00990		-0.3	-1.4	hypothetical protein
A4249_RS12855		-0.3	-1.6	serine protease
A4249_RS05485		-0.3	-0.6	uracil-DNA glycosylase
A4249_RS16790		-0.3	-1.0	hypothetical protein
A4249_RS08705		-0.3	-1.5	response regulator
A4249_RS05885		-0.3	-1.4	cold-shock protein
A4249_RS02180		-0.3	-1.5	hypothetical protein
A4249_RS06785		-0.3	-1.0	endolytic transglycosylase MltG
A4249_RS07000		-0.3	-1.0	hypothetical protein
A4249_RS08485		-0.3	-1.2	Na+/H+ antiporter subunit C
A4249_RS13190		-0.3	-0.9	2-oxo acid dehydrogenase subunit E2
A4249_RS12200		-0.3	-1.2	fructose-6-phosphate aldolase
A4249_RS04060		-0.3	-0.9	ABC transporter ATP-binding protein
A4249_RS12175		-0.3	-1.4	zf-TFIIB domain-containing protein
A4249_RS10430		-0.3	-1.4	S1/P1 Nuclease
A4249_RS14840		-0.3	-1.2	carboxynorspermidine decarboxylase
A4249_RS16685		-0.2	-0.4	tRNA-Arg
A4249_RS07505		-0.2	-1.0	hypothetical protein
A4249_RS15690		-0.2	-1.4	DsbA family oxidoreductase
A4249_RS15700		-0.2	-1.8	AAA family ATPase
A4249_RS10705		-0.2	-1.5	imidazole glycerol phosphate synthase subunit HisH
A4249_RS06865		-0.2	-1.3	hypothetical protein
A4249_RS08730		-0.2	-1.9	hypothetical protein
A4249_RS08805		-0.2	-1.8	HAMP domain-containing sensor histidine kinase
A4249_RS05055		-0.2	-1.2	hypothetical protein
A4249_RS07560		-0.2	-1.2	hypothetical protein
A4249_RS14675		-0.2	-1.0	metallopeptidase family protein
A4249_RS07205		-0.2	-1.8	hypothetical protein
A4249_RS04080		-0.2	-1.1	M48 family metalloprotease
A4249_RS03375		-0.2	-1.2	ferredoxin
A4249_RS12055		-0.2	-0.8	anthranilate synthase component I family protein
A4249_RS02770		-0.2	-1.8	hypothetical protein
A4249_RS14920		-0.2	-1.5	GNAT family N-acetyltransferase
A4249_RS07155		-0.2	-2.1	hypothetical protein
A4249_RS03180		-0.2	-1.3	hypothetical protein
A4249_RS14445		-0.2	-0.7	hypothetical protein
A4249_RS16765		-0.2	-0.6	hypothetical protein
A4249_RS08145		-0.2	-1.2	NAD(P)H-binding protein
A4249_RS04450		-0.2	-0.6	cytochrome o ubiquinol oxidase subunit I
A4249_RS16505		-0.2	-1.2	SEC-C metal-binding domain-containing protein
A4249_RS07380		-0.2	-1.0	exopolysaccharide biosynthesis protein
A4249_RS10630		-0.2	-1.0	FAD:protein FMN transferase
A4249_RS05215		-0.2	-1.2	hypothetical protein
A4249_RS14950		-0.2	-0.9	ParD-like family protein
A4249_RS03000		-0.2	-1.4	glycosyltransferase family 1 protein
A4249_RS00685		-0.2	-0.9	hypothetical protein
A4249_RS03110		-0.2	-1.2	MAPEG family protein
A4249_RS01340		-0.2	-1.2	phosphoadenosine phosphosulfate reductase family protein
A4249_RS01645		-0.2	-1.2	crotonase/enoyl-CoA hydratase family protein
A4249_RS08615		-0.2	-1.8	flagellin
A4249_RS14690		-0.2	-1.5	TIGR03862 family flavoprotein
A4249_RS14695		-0.2	-1.2	transcription elongation factor GreA
A4249_RS10715		-0.2	-1.6	imidazole glycerol phosphate synthase subunit HisF
A4249_RS05845		-0.2	-0.7	sigma-70 family RNA polymerase sigma factor
A4249_RS02550		-0.2	-1.6	dipeptidase
A4249_RS09880		-0.2	-2.0	TonB-dependent receptor
A4249_RS04460		-0.2	-1.0	cytochrome o ubiquinol oxidase subunit IV
A4249_RS01815		-0.2	-0.7	DNA mismatch endonuclease Vsr
A4249_RS01125		-0.2	-1.2	hypothetical protein

Specific Phenotypes

None in this experiment

For Brevundimonas sp. GW460-12-10-14-LB2 in carbon source experiments

For carbon source Cytosine across organisms