Experiment set2IT090 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with benzoic acid 0.58 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_10575 +1.1 2.0 hypothetical protein compare
CA264_15180 +1.1 4.9 energy transducer TonB compare
CA264_06630 +1.0 2.4 hypothetical protein compare
CA264_15000 +0.9 0.9 single-stranded DNA-binding protein compare
CA264_11135 +0.9 2.8 DUF2179 domain-containing protein compare
CA264_07285 +0.9 6.8 alpha-amlyase compare
CA264_01545 +0.8 1.8 3-deoxy-7-phosphoheptulonate synthase compare
CA264_14835 +0.8 6.3 hypothetical protein compare
CA264_01725 +0.8 2.2 NADH-quinone oxidoreductase subunit K compare
CA264_11655 +0.7 0.9 hypothetical protein compare
CA264_18480 +0.7 0.9 hypothetical protein compare
CA264_00565 +0.7 1.0 hypothetical protein compare
CA264_15865 +0.7 3.6 helicase compare
CA264_05930 +0.7 1.8 glyoxalase compare
CA264_16590 +0.7 1.8 site-2 protease family protein compare
CA264_18345 +0.7 0.6 hypothetical protein compare
CA264_12190 +0.7 3.4 hypothetical protein compare
CA264_21460 +0.7 1.5 hypothetical protein compare
CA264_06250 +0.7 2.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
CA264_10535 +0.7 2.2 cyclic pyranopterin monophosphate synthase MoaC compare
CA264_09955 +0.6 1.0 hypothetical protein compare
CA264_18265 +0.6 3.1 hypothetical protein compare
CA264_13480 +0.6 1.7 hypothetical protein compare
CA264_14840 +0.6 5.5 hypothetical protein compare
CA264_20925 +0.6 0.8 hypothetical protein compare
CA264_17640 +0.6 3.1 acyl-CoA dehydrogenase compare
CA264_14405 +0.6 2.5 hypothetical protein compare
CA264_06445 +0.6 1.7 NUDIX hydrolase compare
CA264_07280 +0.6 3.5 hypothetical protein compare
CA264_07685 +0.6 1.8 aminotransferase class I and II compare
CA264_05500 +0.6 2.2 hypothetical protein compare
CA264_07275 +0.6 3.6 hypothetical protein compare
CA264_20310 +0.6 3.1 TVP38/TMEM64 family protein compare
CA264_04140 +0.6 3.5 cyanophycinase compare
CA264_01890 +0.6 1.9 hypothetical protein compare
CA264_01720 +0.6 3.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 compare
CA264_00235 +0.6 2.2 hypothetical protein compare
CA264_07270 +0.6 2.0 hypothetical protein compare
CA264_10580 +0.5 1.4 hypothetical protein compare
CA264_15200 +0.5 4.0 hypothetical protein compare
CA264_07565 +0.5 1.9 four-helix bundle copper-binding protein compare
CA264_10120 +0.5 2.8 hypothetical protein compare
CA264_14625 +0.5 0.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
CA264_02575 +0.5 1.7 potassium transporter KefB compare
CA264_17020 +0.5 2.6 methyltransferase type 11 compare
CA264_06260 +0.5 2.4 N-acetyltransferase compare
CA264_09740 +0.5 2.3 hypothetical protein compare
CA264_18525 +0.5 2.5 hypothetical protein compare
CA264_15670 +0.5 0.9 DUF4295 domain-containing protein compare
CA264_19825 +0.5 3.0 Tat (twin-arginine translocation) pathway signal sequence containing protein compare
CA264_02980 +0.5 2.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
CA264_13860 +0.5 1.5 hypothetical protein compare
CA264_11985 +0.5 2.4 dipeptidase E compare
CA264_12890 +0.5 1.5 iron-binding protein compare
CA264_12840 +0.5 1.4 hypothetical protein compare
CA264_12935 +0.5 1.4 serine hydrolase compare
CA264_03810 +0.5 1.1 hypothetical protein compare
CA264_00905 +0.5 1.7 hypothetical protein compare
CA264_07485 +0.5 2.1 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_20000 +0.5 0.8 cold-shock protein compare
CA264_08130 +0.5 1.1 antibiotic biosynthesis monooxygenase compare
CA264_19875 +0.5 1.4 RNA methyltransferase compare
CA264_03170 +0.5 0.5 hypothetical protein compare
CA264_06600 +0.5 3.1 glycosyltransferase compare
CA264_03390 +0.5 1.3 hypothetical protein compare
CA264_20875 +0.5 1.6 resolvase compare
CA264_13870 +0.4 2.5 hypothetical protein compare
CA264_21180 +0.4 2.1 ribulose-phosphate 3-epimerase compare
CA264_03460 +0.4 2.5 hypothetical protein compare
CA264_13165 +0.4 2.6 arylesterase compare
CA264_12790 +0.4 1.7 hypothetical protein compare
CA264_17205 +0.4 0.8 diacylglycerol kinase compare
CA264_16240 +0.4 1.6 hypothetical protein compare
CA264_18095 +0.4 1.5 hypothetical protein compare
CA264_07775 +0.4 0.6 transcriptional regulator compare
CA264_05990 +0.4 2.4 hypothetical protein compare
CA264_10045 +0.4 1.0 hypothetical protein compare
CA264_04460 +0.4 1.1 ABC transporter compare
CA264_01445 +0.4 0.8 hypothetical protein compare
CA264_13865 +0.4 0.6 hypothetical protein compare
CA264_04185 +0.4 1.6 phosphatidylethanolamine-binding protein compare
CA264_00315 +0.4 1.9 hypothetical protein compare
CA264_07610 +0.4 1.6 chemotaxis protein CheW compare
CA264_12230 +0.4 1.8 hypothetical protein compare
CA264_03710 +0.4 2.0 AraC family transcriptional regulator compare
CA264_13170 +0.4 1.3 hypothetical protein compare
CA264_08590 +0.4 1.0 hypothetical protein compare
CA264_16835 +0.4 1.5 hypothetical protein compare
CA264_18775 +0.4 0.6 hypothetical protein compare
CA264_05140 +0.4 2.7 hypothetical protein compare
CA264_12795 +0.4 1.9 hypothetical protein compare
CA264_00730 +0.4 1.2 hypothetical protein compare
CA264_17500 +0.4 0.9 molecular chaperone DnaK compare
CA264_06015 +0.4 1.7 hypothetical protein compare
CA264_03160 +0.4 1.0 metallophosphoesterase compare
CA264_15185 +0.4 1.6 hypothetical protein compare
CA264_05640 +0.4 2.9 transporter compare
CA264_13880 +0.4 1.9 hypothetical protein compare
CA264_00745 +0.4 2.2 ribonuclease III compare
CA264_14025 +0.4 1.9 mismatch-specific DNA-glycosylase compare
CA264_04475 +0.4 0.7 cold-shock protein compare
CA264_16570 +0.4 1.4 hypothetical protein compare
CA264_08290 +0.4 1.5 Fe-S metabolism protein SufE compare
CA264_16220 +0.4 1.9 sulfite reductase compare
CA264_17755 +0.4 2.6 ABC transporter compare
CA264_20115 +0.4 2.5 phosphoribosylamine--glycine ligase compare
CA264_01660 +0.4 2.0 hypothetical protein compare
CA264_02070 +0.4 2.0 LLM class flavin-dependent oxidoreductase compare
CA264_13605 +0.4 2.0 hypothetical protein compare
CA264_19700 +0.4 1.9 hypothetical protein compare
CA264_07000 +0.4 2.2 DUF4833 domain-containing protein compare
CA264_12605 +0.4 2.6 stress protection protein MarC compare
CA264_20275 +0.4 1.5 DNA-binding protein compare
CA264_02890 +0.4 1.8 hypothetical protein compare
CA264_17710 +0.4 2.8 hypothetical protein compare
CA264_10255 +0.4 0.8 hypothetical protein compare
CA264_05940 +0.4 2.1 hypothetical protein compare
CA264_10650 +0.4 2.3 hypothetical protein compare
CA264_11970 +0.4 0.8 hypothetical protein compare
CA264_18030 +0.4 2.3 cation transporter compare
CA264_15800 +0.4 2.3 hypothetical protein compare
CA264_16885 +0.4 1.8 alpha/beta hydrolase compare
CA264_05160 +0.4 1.9 hypothetical protein compare
CA264_21415 +0.4 1.8 IS256 family transposase compare
CA264_09355 +0.4 1.5 nitroreductase compare
CA264_18530 +0.4 1.1 MarR family transcriptional regulator compare
CA264_05515 +0.4 2.4 aldehyde dehydrogenase compare
CA264_06700 +0.4 1.9 hypothetical protein compare
CA264_10940 +0.4 2.2 phenylacetate-CoA oxygenase subunit PaaA compare
CA264_06745 +0.4 2.6 hypothetical protein compare
CA264_06085 +0.4 1.3 hypothetical protein compare
CA264_12985 +0.4 2.3 hypothetical protein compare
CA264_04865 +0.4 1.8 ATPase compare
CA264_14510 +0.4 2.1 hypothetical protein compare
CA264_15195 +0.4 1.3 phosphate ABC transporter substrate-binding protein, PhoT family compare
CA264_03885 +0.4 1.7 hypothetical protein compare
CA264_03325 +0.4 1.4 hypothetical protein compare
CA264_17545 +0.4 2.7 single-stranded-DNA-specific exonuclease RecJ compare
CA264_07815 +0.4 2.0 hypothetical protein compare
CA264_13320 +0.4 2.3 3-phosphoglycerate dehydrogenase compare
CA264_05020 +0.4 2.1 hypothetical protein compare
CA264_20785 +0.4 1.8 hypothetical protein compare
CA264_06125 +0.4 1.2 alkyl hydroperoxide reductase compare
CA264_11275 +0.4 1.5 hypothetical protein compare
CA264_14125 +0.4 1.5 endonuclease V compare
CA264_04705 +0.4 1.8 hypothetical protein compare
CA264_01835 +0.3 0.8 GNAT family N-acetyltransferase compare
CA264_04165 +0.3 1.9 isoaspartyl peptidase/L-asparaginase compare
CA264_21050 +0.3 1.1 hypothetical protein compare
CA264_14310 +0.3 1.4 hypothetical protein compare
CA264_21120 +0.3 1.4 ZIP family zinc transporter compare
CA264_19125 +0.3 0.8 hypothetical protein compare
CA264_09070 +0.3 0.9 hypothetical protein compare
CA264_12630 +0.3 1.7 RDD family protein compare
CA264_02685 +0.3 1.9 hypothetical protein compare
CA264_13330 +0.3 1.5 hypothetical protein compare
CA264_06115 +0.3 2.2 acyl-CoA thioesterase compare
CA264_02720 +0.3 2.2 peroxiredoxin compare
CA264_20455 +0.3 2.3 LLM class flavin-dependent oxidoreductase compare
CA264_09250 +0.3 2.0 hemolysin compare
CA264_20480 +0.3 1.5 ubiquinol-cytochrome C reductase compare
CA264_06285 +0.3 0.6 N-acetyltransferase compare
CA264_10935 +0.3 1.5 TetR family transcriptional regulator compare
CA264_16440 +0.3 0.9 hypothetical protein compare
CA264_14785 +0.3 1.9 hypothetical protein compare
CA264_05905 +0.3 1.4 hypothetical protein compare
CA264_10305 +0.3 0.5 hypothetical protein compare
CA264_06215 +0.3 1.9 peptidase-C39 like family protein compare
CA264_13675 +0.3 1.7 GntR family transcriptional regulator compare
CA264_00050 +0.3 2.1 hypothetical protein compare
CA264_21245 +0.3 1.8 hypothetical protein compare
CA264_01810 +0.3 1.2 hypothetical protein compare
CA264_02415 +0.3 0.8 dethiobiotin synthase compare
CA264_16130 +0.3 1.6 TetR family transcriptional regulator compare
CA264_01705 +0.3 2.1 NADH-quinone oxidoreductase subunit H compare
CA264_12855 +0.3 0.9 hypothetical protein compare
CA264_11815 +0.3 1.8 hypothetical protein compare
CA264_20340 +0.3 1.3 STAS/SEC14 domain-containing protein compare
CA264_12720 +0.3 1.0 hypothetical protein compare
CA264_19020 +0.3 1.2 PA-phosphatase compare
CA264_10250 +0.3 2.1 AAA family ATPase compare
CA264_18460 +0.3 1.2 hypothetical protein compare
CA264_05750 +0.3 1.4 universal stress protein compare
CA264_01970 +0.3 1.1 multidrug ABC transporter ATP-binding protein compare
CA264_05650 +0.3 2.0 tryptophan 2,3-dioxygenase compare
CA264_15005 +0.3 1.8 magnesium/cobalt efflux protein compare
CA264_11965 +0.3 1.8 RNA polymerase subunit sigma compare
CA264_14935 +0.3 1.1 sec-independent protein translocase TatC compare
CA264_19215 +0.3 1.7 RNA polymerase subunit sigma compare
CA264_17415 +0.3 0.6 hypothetical protein compare
CA264_07335 +0.3 1.3 transcriptional regulator compare
CA264_09735 +0.3 0.8 5-hydroxyisourate hydrolase compare
CA264_07425 +0.3 2.5 AI-2E family transporter compare
CA264_09370 +0.3 1.6 amidase compare
CA264_20420 +0.3 1.5 thiazole synthase compare
CA264_11920 +0.3 1.8 DNA polymerase III subunit epsilon compare
CA264_15895 +0.3 2.4 hypothetical protein compare
CA264_13825 +0.3 0.6 hypothetical protein compare
CA264_02030 +0.3 1.3 hypothetical protein compare
CA264_04075 +0.3 1.3 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress benzoic acid in Pontibacter actiniarum KMM 6156, DSM 19842

For stress benzoic acid across organisms