Experiment set2IT085 for Escherichia coli BW25113

LB with 1-ethyl-3-methylimidazolium acetate 30 mM

Group: stress
Media: LB + 1-ethyl-3-methylimidazolium acetate (30 mM)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Kelly on 6/30/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 963 D3,D4

Specific Phenotypes

For 9 genes in this experiment

For stress 1-ethyl-3-methylimidazolium acetate in Escherichia coli BW25113

For stress 1-ethyl-3-methylimidazolium acetate across organisms

SEED Subsystems

Subsystem	#Specific
CytR regulation	1
Deoxyribose and Deoxynucleoside Catabolism	1
Murein hydrolase regulation and cell death	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pyrimidine metabolism
• Glycerolipid metabolism
• Drug metabolism - other enzymes

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
pyrimidine ribonucleosides salvage II	2	2	1
pyrimidine ribonucleosides degradation	2	2	1
pyrimidine ribonucleosides salvage I	3	3	1
pyrimidine deoxyribonucleosides degradation	3	3	1
superpathway of pyrimidine ribonucleosides degradation	5	4	1
pyrimidine deoxyribonucleosides salvage	5	4	1
superpathway of pyrimidine deoxyribonucleosides degradation	6	6	1
superpathway of pyrimidine deoxyribonucleoside salvage	9	8	1
superpathway of pyrimidine ribonucleosides salvage	10	10	1