Experiment set2IT084 for Pseudomonas simiae WCS417

Compare to:

Gly-Glu carbon source

200 most important genes:

  gene name fitness t score description  
PS417_18600 -7.3 -5.0 isopropylmalate isomerase compare
PS417_01575 -7.0 -6.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_18585 -6.5 -4.5 3-isopropylmalate dehydrogenase compare
PS417_01855 -6.2 -4.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_17480 -6.1 -7.3 branched-chain amino acid ABC transporter substrate-binding protein compare
PS417_25940 -5.9 -8.1 pyrroloquinoline quinone biosynthesis protein PqqE compare
PS417_18560 -5.8 -10.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_00185 -5.7 -3.9 tryptophan synthase subunit beta compare
PS417_04415 -5.5 -8.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_25720 -5.5 -9.2 anthranilate synthase component II compare
PS417_01565 -5.5 -4.6 imidazole glycerol phosphate synthase compare
PS417_24745 -5.4 -3.7 gamma-glutamyl phosphate reductase compare
PS417_01850 -5.3 -6.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23805 -5.3 -6.2 acetolactate synthase 3 regulatory subunit compare
PS417_17450 -5.2 -5.7 amino acid ABC transporter substrate-binding protein compare
PS417_07640 -5.2 -5.0 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_21035 -5.2 -12.5 multidrug transporter compare
PS417_12290 -5.1 -8.5 sulfite reductase compare
PS417_26740 -5.1 -11.8 homoserine acetyltransferase compare
PS417_24765 -5.1 -6.0 membrane protein compare
PS417_18530 -5.1 -6.5 O-succinylhomoserine sulfhydrylase compare
PS417_25715 -5.1 -4.9 anthranilate phosphoribosyltransferase compare
PS417_02510 -5.0 -5.0 ATP phosphoribosyltransferase regulatory subunit compare
PS417_23800 -5.0 -11.1 ketol-acid reductoisomerase compare
PS417_23810 -4.9 -12.0 acetolactate synthase 3 catalytic subunit compare
PS417_16465 -4.8 -11.9 sirohydrochlorin ferrochelatase compare
PS417_25725 -4.8 -12.1 anthranilate synthase component I compare
PS417_17415 -4.6 -7.4 histidine kinase compare
PS417_23110 -4.5 -12.2 2-isopropylmalate synthase compare
PS417_26890 -4.5 -6.9 dihydroxy-acid dehydratase compare
PS417_27795 -4.5 -2.0 orotate phosphoribosyltransferase compare
PS417_17420 -4.4 -11.7 ethanol oxidation regulatory protein ercA (from data) compare
PS417_04420 -4.4 -11.3 histidinol dehydrogenase compare
PS417_06375 -4.4 -1.9 deoxycytidine triphosphate deaminase compare
PS417_23545 -4.3 -4.2 gamma-glutamyl kinase compare
PS417_21750 -4.2 -18.6 acetyl-CoA synthetase compare
PS417_18595 -4.2 -3.4 3-isopropylmalate dehydratase compare
PS417_17485 -4.1 -7.3 membrane protein compare
PS417_09725 -4.1 -9.1 transporter compare
PS417_26745 -4.1 -6.0 methionine biosynthesis protein MetW compare
PS417_16570 -4.0 -11.4 isocitrate lyase compare
PS417_01605 -3.9 -2.7 phosphoglycerate mutase compare
PS417_26995 -3.9 -10.6 phosphoserine phosphatase compare
PS417_04070 -3.9 -8.1 porin compare
PS417_25920 -3.9 -8.3 pyrroloquinoline quinone biosynthesis protein PqqF compare
PS417_02000 -3.8 -13.1 glutamate synthase compare
PS417_17435 -3.8 -10.0 dehydrogenase compare
PS417_05595 -3.7 -8.9 ornithine carbamoyltransferase compare
PS417_17490 -3.7 -3.1 ABC transporter ATP-binding protein compare
PS417_17495 -3.6 -10.0 multidrug ABC transporter permease compare
PS417_17565 -3.6 -5.7 branched-chain amino acid aminotransferase compare
PS417_24100 -3.6 -8.8 transcriptional regulator PdhR compare
PS417_01570 -3.6 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_25930 -3.6 -7.3 pyrroloquinoline quinone biosynthesis protein PqqC compare
PS417_17425 -3.6 -6.5 hypothetical protein compare
PS417_27195 -3.6 -2.1 N-acetylglutamate synthase compare
PS417_02005 -3.5 -9.7 glutamate synthase compare
PS417_26990 -3.5 -2.1 RNA pyrophosphohydrolase compare
PS417_04050 -3.5 -2.5 peptide ABC transporter ATP-binding protein compare
PS417_17505 -3.4 -3.0 LuxR family transcriptional regulator compare
PS417_08155 -3.4 -2.5 integration host factor subunit beta compare
PS417_23995 -3.4 -1.5 preprotein translocase subunit SecG compare
PS417_00180 -3.3 -3.8 tryptophan synthase subunit alpha compare
PS417_01580 -3.3 -1.8 imidazole glycerol phosphate synthase compare
PS417_12855 -3.2 -6.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_04055 -3.2 -6.1 peptide transporter conserved
PS417_04075 -3.2 -9.3 peptide ABC transporter substrate-binding protein compare
PS417_01950 -3.1 -6.7 malate dehydrogenase compare
PS417_22360 -3.1 -9.2 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) conserved
PS417_04060 -3.1 -6.5 dipeptide ABC transporter, permease component (from data) conserved
PS417_26040 -3.1 -3.6 malate synthase compare
PS417_27010 -3.1 -11.0 threonine dehydratase compare
PS417_20125 -3.1 -5.6 phosphoribosylglycinamide formyltransferase compare
PS417_26730 -2.9 -1.8 pyrroline-5-carboxylate reductase compare
PS417_08125 -2.9 -1.8 prephenate dehydratase compare
PS417_27305 -2.9 -9.1 5-formyltetrahydrofolate cyclo-ligase compare
PS417_11845 -2.9 -5.8 RpiR family transcriptional regulator compare
PS417_27435 -2.9 -7.9 polyphosphate kinase compare
PS417_24155 -2.8 -4.2 ATP-binding protein compare
PS417_16990 -2.8 -6.8 acyl-CoA dehydrogenase compare
PS417_01710 -2.7 -6.3 histidine utilization repressor compare
PS417_25710 -2.7 -2.0 indole-3-glycerol-phosphate synthase compare
PS417_27875 -2.7 -10.4 histidine kinase compare
PS417_20160 -2.7 -3.9 cysteine synthase compare
PS417_19965 -2.7 -13.2 histidine kinase conserved
PS417_04080 -2.6 -3.4 peptide ABC transporter substrate-binding protein compare
PS417_22500 -2.5 -12.4 porin compare
PS417_10995 -2.4 -4.2 GntR family transcriptional regulator compare
PS417_08205 -2.4 -4.4 acetyltransferase compare
PS417_22570 -2.4 -1.8 H-NS histone compare
PS417_14940 -2.4 -3.3 LysR family transcriptional regulator compare
PS417_05165 -2.4 -4.4 cytosol aminopeptidase compare
PS417_20985 -2.3 -3.9 porin compare
PS417_26985 -2.3 -4.0 phosphoenolpyruvate-protein phosphotransferase compare
PS417_12310 -2.3 -11.0 methionine synthase compare
PS417_04180 -2.3 -5.4 GntR family transcriptional regulator compare
PS417_04595 -2.3 -4.3 cell division protein MraZ compare
PS417_20610 -2.3 -2.4 hypothetical protein compare
PS417_22355 -2.3 -7.6 glycine cleavage system protein H compare
PS417_22350 -2.3 -3.0 Fis family transcriptional regulator compare
PS417_21030 -2.2 -10.0 GntR family transcriptional regulator compare
PS417_22370 -2.2 -6.3 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
PS417_08230 -2.2 -3.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_08540 -2.2 -4.6 RNA helicase compare
PS417_02485 -2.2 -6.5 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_08225 -2.1 -6.6 acetolactate synthase compare
PS417_21125 -2.1 -8.8 phosphoadenosine phosphosulfate reductase compare
PS417_27835 -2.0 -9.6 endoribonuclease compare
PS417_19600 -2.0 -2.2 exonuclease compare
PS417_22115 -2.0 -4.2 transcriptional regulator compare
PS417_01560 -2.0 -3.4 imidazoleglycerol-phosphate dehydratase compare
PS417_03560 -2.0 -2.5 GTP-binding protein compare
PS417_08245 -1.9 -1.8 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_08195 -1.9 -8.8 hypothetical protein compare
PS417_20665 -1.8 -6.1 hypothetical protein compare
PS417_03310 -1.8 -7.6 carbonate dehydratase compare
PS417_24835 -1.8 -5.3 hypothetical protein compare
PS417_03260 -1.8 -2.7 5S ribosomal RNA compare
PS417_17455 -1.8 -1.8 cytochrome C compare
PS417_26760 -1.7 -7.1 oxidase compare
PS417_28050 -1.7 -2.6 hypothetical protein compare
PS417_02225 -1.7 -3.5 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_17510 -1.7 -10.8 histidine kinase compare
PS417_08730 -1.7 -1.9 cytochrome C compare
PS417_04065 -1.7 -2.5 peptide ABC transporter substrate-binding protein compare
PS417_17515 -1.7 -6.0 GfdT protein compare
PS417_08220 -1.6 -1.4 epimerase compare
PS417_04270 -1.6 -9.7 ribonuclease G compare
PS417_16510 -1.6 -4.5 Clp protease ClpX compare
PS417_06775 -1.6 -6.3 antibiotic transporter compare
PS417_05840 -1.6 -2.1 LuxR family transcriptional regulator compare
PS417_12355 -1.6 -3.2 magnesium chelatase compare
PS417_09325 -1.6 -6.2 peptidase S41 compare
PS417_22450 -1.6 -1.7 ATP-dependent DNA helicase RuvA compare
PS417_06770 -1.5 -6.2 multidrug transporter compare
PS417_23770 -1.5 -2.8 exodeoxyribonuclease V subunit alpha compare
PS417_27585 -1.4 -3.3 diaminopimelate epimerase compare
PS417_05570 -1.4 -5.7 DeoR faimly transcriptional regulator compare
PS417_20620 -1.4 -4.6 glycosyl transferase family 2 compare
PS417_09695 -1.4 -2.1 hydrolase compare
PS417_10675 -1.4 -1.4 TetR family transcriptional regulator compare
PS417_09705 -1.4 -2.1 hypothetical protein compare
PS417_22520 -1.4 -2.6 histidine kinase compare
PS417_24800 -1.4 -4.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_22445 -1.4 -4.1 ATP-dependent DNA helicase RuvB compare
PS417_07620 -1.4 -1.8 beta-hexosaminidase compare
PS417_03145 -1.4 -2.8 acetyl-CoA acetyltransferase compare
PS417_21655 -1.4 -1.7 aspartate kinase compare
PS417_00445 -1.3 -7.4 histidine kinase compare
PS417_09700 -1.3 -2.4 transaldolase compare
PS417_03925 -1.3 -7.2 nicotinate-nucleotide pyrophosphorylase compare
PS417_00295 -1.3 -7.2 hypothetical protein compare
PS417_20635 -1.3 -1.3 ABC transporter ATP-binding protein compare
PS417_04860 -1.3 -6.0 ATPase compare
PS417_16005 -1.3 -4.0 ATPase compare
PS417_06200 -1.2 -4.0 protein-PII uridylyltransferase compare
PS417_21210 -1.2 -1.4 amidotransferase compare
PS417_24935 -1.2 -1.0 hypothetical protein compare
PS417_19075 -1.2 -4.8 ABC transporter ATP-binding protein compare
PS417_23315 -1.2 -1.7 transcriptional regulator compare
PS417_01915 -1.2 -1.3 ATP-dependent protease ATP-binding subunit HslU compare
PS417_21320 -1.2 -3.4 transcriptional regulator compare
PS417_22385 -1.2 -8.2 quinolinate synthase A compare
PS417_08200 -1.2 -2.4 hypothetical protein compare
PS417_09085 -1.2 -1.5 hypothetical protein compare
PS417_17015 -1.2 -4.5 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) compare
PS417_23725 -1.1 -2.6 methylmalonate-semialdehyde dehydrogenase compare
PS417_10245 -1.1 -1.8 hypothetical protein compare
PS417_23105 -1.1 -1.8 hypothetical protein compare
PS417_10535 -1.1 -2.9 hypothetical protein compare
PS417_21020 -1.1 -8.7 phosphoenolpyruvate synthase compare
PS417_12075 -1.1 -4.7 DNA-binding protein compare
PS417_21025 -1.1 -5.0 PEP synthetase regulatory protein compare
PS417_21430 -1.1 -2.5 3-oxoacyl-ACP synthase compare
PS417_21095 -1.1 -6.1 membrane protein compare
PS417_17705 -1.1 -2.8 LacI family transcriptional regulator compare
PS417_16490 -1.1 -2.3 cell division protein FtsK compare
PS417_16640 -1.1 -2.5 toxin compare
PS417_20645 -1.1 -7.4 membrane protein compare
PS417_01210 -1.1 -6.2 hypothetical protein compare
PS417_21710 -1.0 -1.7 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_09715 -1.0 -2.9 hypothetical protein compare
PS417_19335 -1.0 -3.2 isochorismatase compare
PS417_18435 -1.0 -2.8 hypothetical protein compare
PS417_07170 -1.0 -4.1 hypothetical protein compare
PS417_18410 -1.0 -4.8 glutaminase compare
PS417_07615 -1.0 -3.4 TetR family transcriptional regulator compare
PS417_18690 -1.0 -3.3 aromatic amino acid aminotransferase compare
PS417_15235 -1.0 -2.7 short-chain dehydrogenase compare
PS417_08580 -1.0 -4.3 histidine kinase compare
PS417_09710 -0.9 -1.8 dehydrogenase compare
PS417_27300 -0.9 -1.1 cell division protein ZapA compare
PS417_27290 -0.9 -1.7 hypothetical protein compare
PS417_18425 -0.9 -1.4 sporulation protein compare
PS417_11405 -0.9 -3.1 precorrin 6A synthase compare
PS417_19955 -0.9 -1.7 hypothetical protein compare
PS417_02890 -0.9 -1.9 cobalt-precorrin-6X reductase compare
PS417_24085 -0.9 -2.2 protein RnfH compare
PS417_19275 -0.9 -1.2 hypothetical protein compare
PS417_22535 -0.9 -4.0 ornithine acetyltransferase compare


Specific Phenotypes

For 29 genes in this experiment

For carbon source Gly-Glu in Pseudomonas simiae WCS417

For carbon source Gly-Glu across organisms