Experiment set2IT083 for Agrobacterium fabrum C58

Compare to:

D-Leucrose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.6 -5.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu0038 -7.7 -5.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2650 -6.9 -11.6 glycerol-3-phosphate dehydrogenase compare
Atu1687 -6.7 -11.2 anthranilate phosphoribosyltransferase compare
Atu2791 -6.6 -6.5 3-isopropylmalate dehydrogenase compare
Atu2709 -6.6 -18.1 3-isopropylmalate dehydratase, large subunit compare
Atu2289 -6.5 -15.3 anthranilate synthase component I and II compare
Atu3706 -6.5 -6.3 D-3-phosphoglycerate dehydrogenase compare
Atu1845 -6.4 -6.2 phosphoribosylformylglycinamidine synthase I compare
Atu2264 -6.3 -12.1 2-isopropylmalate synthase compare
Atu2040 -6.2 -4.3 phosphoserine phosphatase compare
Atu0679 -6.2 -6.0 ATP phosphoribosyltransferase compare
Atu1307 -6.2 -8.4 dihydroorotase compare
Atu1205 -6.1 -12.4 threonine dehydratase compare
Atu2718 -6.1 -7.2 homoserine O-succinyltransferase compare
Atu0432 -6.0 -10.1 O-succinylhomoserine sulfhydrylase compare
Atu2726 -6.0 -22.5 pyruvate carboxylase compare
Atu3885 -5.9 -9.0 inositol monophosphatase compare
Atu2036 -5.9 -15.1 acetolactate synthase III, large subunit compare
Atu0298 -5.8 -7.0 orotidine 5 compare
Atu0537 -5.8 -5.6 histidinol dehydrogenase compare
Atu1075 -5.8 -7.9 amidophosphoribosyltransferase compare
Atu0017 -5.7 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0400 -5.7 -6.7 orotate phosphoribosyltransferase compare
Atu3783 -5.6 -16.9 glutamate synthase subunit beta compare
Atu0678 -5.6 -5.4 histidyl-tRNA synthetase compare
Atu0099 -5.5 -12.9 prephenate dehydratase compare
Atu3343 -5.5 -11.7 trehalose utilization-like protein conserved
Atu3338 -5.4 -13.5 trehalose/maltose ABC transporter substrate-binding protein conserved
Atu1308 -5.3 -7.4 aspartate carbamoyl transferase catalytic subunit compare
Atu1844 -5.1 -4.1 Phosphoribosylformylglycinamidine synthetase compare
Atu1688 -5.1 -7.0 indole-3-glycerol-phosphate synthase compare
Atu3784 -5.1 -26.2 glutamate synthase large subunit compare
Atu2790 -5.1 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu1140 -5.0 -5.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3755 -5.0 -6.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1850 -4.9 -6.5 phosphoribosylformylglycinamidine synthetase II compare
Atu0399 -4.9 -8.2 dihydroorotase compare
Atu2747 -4.8 -13.1 hypothetical protein compare
Atu1588 -4.8 -10.6 homoserine dehydrogenase compare
Atu0041 -4.8 -3.3 glutamine amidotransferase compare
Atu0039 -4.7 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3340 -4.6 -12.1 trehalose/maltose ABC transporter permease conserved
Atu3342 -4.6 -8.3 trehalose utilization-like protein compare
Atu1141 -4.6 -6.4 Phosphoribosylglycinamide synthetase compare
Atu3754 -4.6 -8.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3482 -4.5 -13.2 pantoate--beta-alanine ligase compare
Atu3707 -4.4 -4.8 phosphoserine aminotransferase compare
Atu0486 -4.4 -5.5 dihydroorotate dehydrogenase compare
Atu2015 -4.3 -15.4 aminotransferase compare
Atu0043 -4.2 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu3339 -4.1 -10.7 trehalose/maltose ABC transporter permease conserved
Atu3739 -4.1 -2.3 phosphoglycerate kinase compare
Atu0647 -4.1 -6.8 phosphoribosylamine--glycine ligase compare
Atu0401 -4.0 -9.3 fructokinase compare
Atu3483 -4.0 -8.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3341 -3.8 -9.9 trehalose/maltose ABC transporter ATPase conserved
Atu0792 -3.7 -8.2 hypothetical protein compare
Atu3469 -3.4 -4.0 phosphoglyceromutase compare
Atu0641 -3.4 -5.1 hypothetical protein compare
Atu1030 -3.3 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3731 -3.3 -8.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu1359 -3.2 -1.8 dnaK deletion suppressor protein compare
Atu1456 -3.1 -12.9 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1686 -3.0 -17.4 peptidyl-prolyl cis-trans isomerse D compare
Atu1589 -2.9 -9.5 aminotransferase, class I compare
Atu0040 -2.8 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0598 -2.8 -10.1 phosphogluconate dehydratase compare
Atu1454 -2.6 -6.7 siroheme synthase compare
Atu2548 -2.5 -16.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4096 -2.5 -10.7 nicotinate-nucleotide pyrophosphorylase compare
Atu2200 -2.5 -3.9 cold shock protein compare
Atu4098 -2.5 -13.0 quinolinate synthetase compare
Atu0723 -2.4 -2.3 FAD dependent oxidoreductase compare
Atu0184 -2.4 -4.0 glucokinase compare
Atu4711 -2.3 -10.5 two component sensor kinase compare
Atu2155 -2.2 -14.8 methionine synthase compare
Atu3730 -2.2 -2.0 hypothetical protein compare
Atu4773 -2.1 -2.6 two component response regulator compare
Atu0769 -2.0 -3.0 protoheme IX farnesyltransferase compare
Atu8052 -1.9 -2.1 hypothetical protein compare
Atu1904 -1.8 -2.9 transcriptional regulator compare
Atu3908 -1.8 -8.9 GntR family transcriptional regulator compare
Atu1446 -1.8 -3.3 two component response regulator compare
Atu1620 -1.8 -10.0 triosephosphate isomerase compare
Atu3997 -1.7 -13.2 biotin synthetase compare
Atu0030 -1.7 -2.1 phosphocarrier protein HPr compare
Atu4097 -1.7 -7.9 L-aspartate oxidase compare
Atu1462 -1.6 -10.2 glycine cleavage system protein P2 compare
Atu4685 -1.6 -7.5 LacI family transcriptional regulator compare
Atu3290 -1.6 -7.7 phosphomethylpyrimidine kinase compare
Atu1455 -1.6 -2.6 hypothetical protein compare
Atu3289 -1.6 -3.6 thiamine-phosphate pyrophosphorylase compare
Atu1464 -1.5 -5.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu0434 -1.5 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0419 -1.5 -1.7 two component sensor kinase compare
Atu2569 -1.5 -10.5 thiamine biosynthesis protein compare
Atu2125 -1.5 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3910 -1.5 -3.7 LamB/YcsF family protein compare
Atu1463 -1.4 -5.6 glycine cleavage system component H compare
Atu0912 -1.4 -1.7 Na+/H+ antiporter compare
Atu6114 -1.4 -1.5 hypothetical protein compare
Atu0354 -1.3 -2.3 ferric uptake regulator compare
Atu0595 -1.3 -7.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0422 -1.3 -1.7 ABC transporter, membrane spanning protein compare
Atu3999 -1.3 -3.3 dithiobiotin synthetase compare
Atu3162 -1.3 -7.3 LacI family transcriptional regulator compare
Atu0593 -1.3 -7.5 ABC transporter, membrane spanning protein compare
Atu2205 -1.3 -5.1 transcriptional regulator, MarR family compare
Atu6098 -1.3 -0.9 transcriptional regulator, HTH family compare
Atu0029 -1.3 -4.9 S-adenosylhomocysteine hydrolase compare
Atu0591 -1.2 -7.9 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1163 -1.2 -2.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1748 -1.2 -6.0 NIFU-like protein compare
Atu3288 -1.2 -5.3 hydroxyethylthiazole kinase compare
Atu0031 -1.2 -1.5 PTS system, IIA component compare
Atu2376 -1.2 -1.0 hypothetical protein compare
Atu3763 -1.2 -1.6 hypothetical protein compare
Atu5464 -1.2 -5.5 IclR family transcriptional regulator compare
Atu6189 -1.1 -1.5 protein secretion chaperone compare
Atu4317 -1.1 -2.3 TetR family transcriptional regulator compare
Atu4446 -1.1 -7.4 hypothetical protein compare
Atu0346 -1.1 -1.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0592 -1.1 -5.7 ABC transporter, membrane spanning protein compare
Atu3240 -1.1 -6.2 ROK family transcriptional regulator compare
Atu2124 -1.1 -2.1 transcriptional regulator, ArsR family compare
Atu2662 -1.1 -1.0 acetyltransferase compare
Atu3912 -1.1 -5.1 hypothetical protein compare
Atu1604 -1.1 -6.8 poly-beta-hydroxybutyrate synthase compare
Atu4514 -1.1 -2.8 RpiR family transcriptional regulator compare
Atu4576 -1.0 -5.3 ROK family transcriptional regulator compare
Atu0142 -1.0 -2.1 cytochrome o ubiquinol oxidase subunit II compare
Atu1774 -1.0 -6.2 ABC transporter, substrate binding protein (peptide) compare
Atu3351 -1.0 -5.2 sugar ABC transporter permease compare
Atu0062 -1.0 -4.1 transcriptional regulator, ROK family compare
Atu0966 -1.0 -1.7 hypothetical protein compare
Atu2209 -1.0 -4.1 pyrroline-5-carboxylate reductase compare
Atu3794 -0.9 -5.3 FadR family transcriptional regulator compare
Atu3998 -0.9 -7.2 8-amino-7-oxononanoate synthase compare
Atu2832 -0.9 -2.9 tRNA modification GTPase compare
Atu2123 -0.9 -3.0 methylenetetrahydrofolate reductase compare
Atu0026 -0.9 -0.8 hypothetical protein compare
Atu2020 -0.9 -1.6 transcriptional regulator, TetR family compare
Atu3727 -0.9 -3.0 hypothetical protein compare
Atu4029 -0.9 -4.9 gluconolactonase compare
Atu8115 -0.9 -3.2 Hypothetical Protein compare
Atu2532 -0.9 -3.1 transcriptional regulator, MarR family compare
Atu3352 -0.9 -6.0 sugar ABC transporter substrate-binding protein compare
Atu3144 -0.9 -2.9 GntR family transcriptional regulator compare
Atu3878 -0.9 -5.2 transcriptional regulator compare
Atu0421 -0.9 -1.3 ABC transporter, membrane spanning protein compare
Atu3350 -0.9 -5.0 ABC transporter permease compare
Atu4472 -0.9 -1.8 hypothetical protein compare
Atu4000 -0.8 -6.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu1457 -0.8 -1.6 hypothetical protein compare
Atu0638 -0.8 -1.9 hypothetical protein compare
Atu0771 -0.8 -5.0 cytochrome c oxidase subunit III compare
Atu3280 -0.8 -4.9 GntR family transcriptional regulator compare
Atu3467 -0.8 -2.2 hypothetical protein compare
Atu0086 -0.8 -0.9 ribosome-binding factor A compare
Atu3349 -0.8 -4.0 ABC transporter permease compare
Atu1788 -0.8 -5.0 transcriptional regulator, GntR family compare
Atu4173 -0.8 -2.1 phosphoenolpyruvate-protein phosphotransferase compare
Atu3226 -0.8 -5.5 GntR family transcriptional regulator compare
Atu3623 -0.8 -1.8 DnaJ family molecular chaperone compare
Atu5057 -0.8 -1.6 hypothetical protein compare
Atu1542 -0.8 -3.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu4346 -0.8 -2.9 hypothetical protein compare
Atu2554 -0.8 -1.5 lysyl-tRNA synthetase compare
Atu0361 -0.8 -2.1 transcriptional regulator compare
Atu1286 -0.8 -2.4 hypothetical protein compare
Atu1182 -0.8 -1.8 hypothetical protein compare
Atu0189 -0.8 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0876 -0.8 -1.3 superoxide dismutase compare
Atu0328 -0.8 -4.7 heat-inducible transcription repressor compare
Atu4187 -0.7 -1.3 tRNA-Met compare
Atu2799 -0.7 -2.2 precorrin-6x reductase compare
Atu2207 -0.7 -1.6 two component sensor kinase compare
Atu0101 -0.7 -1.9 cytochrome c compare
Atu2606 -0.7 -3.6 transcriptional regulator, GntR family compare
Atu3750 -0.7 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu5075 -0.7 -3.7 GntR family transcriptional regulator compare
Atu6159 -0.7 -2.2 hypothetical protein compare
Atu3913 -0.7 -3.7 biotin carboxylase compare
Atu0846 -0.7 -1.7 transcriptional regulator, MarR family compare
Atu2807 -0.7 -4.1 cob(I)alamin adenosyltransferase compare
Atu4072 -0.7 -1.1 nodulation protein N compare
Atu2808 -0.7 -3.0 cobyric acid synthase compare
Atu4001 -0.7 -3.8 3-oxoacyl-ACP synthase compare
Atu1285 -0.7 -3.2 metal dependent hydrolase compare
Atu0188 -0.7 -1.7 ABC transporter, membrane spanning protein (peptide) compare
Atu3572 -0.7 -3.9 transcriptional regulator compare
Atu2617 -0.7 -2.2 chemotaxis protein compare
Atu2640 -0.7 -2.7 hypothetical protein compare
Atu0784 -0.7 -1.7 hypothetical protein compare
Atu2821 -0.7 -3.1 transcriptional regulator, GntR family compare
Atu3712 -0.7 -0.9 hypothetical protein compare
Atu0977 -0.7 -2.8 serine protease DO-like protease compare
Atu0322 -0.7 -2.7 enoyl CoA hydratase compare
Atu4075 -0.7 -2.6 glycogen synthase compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source D-Leucrose in Agrobacterium fabrum C58

For carbon source D-Leucrose across organisms