| | gene | name | fitness | t score | description | |
|---|
| b0049 | apaH | -3.6 | -5.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b3962 | udhA | -2.9 | -8.4 | putative oxidoreductase (VIMSS) | compare |
| b0226 | dinJ | -2.5 | -4.4 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1860 | ruvB | -2.4 | -2.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b4172 | hfq | -2.3 | -2.2 | RNA-binding protein Hfq (NCBI) | compare |
| b1658 | purR | -2.3 | -6.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2479 | gcvR | -2.3 | -3.7 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3636 | rpmG | -2.2 | -2.0 | 50S ribosomal protein L33 (NCBI) | compare |
| b2820 | recB | -2.0 | -1.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2528 | iscA | -2.0 | -1.6 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0603 | ybdO | -2.0 | -3.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1279 | yciS | -1.9 | -2.0 | conserved inner membrane protein (NCBI) | compare |
| b1677 | lpp | -1.9 | -3.2 | murein lipoprotein (NCBI) | compare |
| b0726 | sucA | -1.9 | -3.4 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3121 | yhaC | -1.9 | -2.5 | hypothetical protein (NCBI) | compare |
| b1863 | ruvC | -1.9 | -3.8 | Holliday junction resolvase (NCBI) | compare |
| b2699 | recA | -1.9 | -2.1 | recombinase A (NCBI) | compare |
| b3493 | pitA | -1.8 | -6.8 | phosphate transporter, low-affinity (NCBI) | compare |
| b0439 | lon | -1.8 | -4.9 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3463 | ftsE | -1.7 | -3.7 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3792 | wzxE | -1.7 | -7.4 | O-antigen translocase (NCBI) | compare |
| b3237 | argR | -1.7 | -4.3 | arginine repressor (NCBI) | compare |
| b3504 | yhiS | -1.7 | -3.4 | hypothetical protein (RefSeq) | compare |
| b2650 | ypjC | -1.6 | -2.3 | hypothetical protein (RefSeq) | compare |
| b0627 | tatE | -1.6 | -1.7 | twin arginine translocase protein E (NCBI) | compare |
| b0912 | ihfB | -1.6 | -3.2 | integration host factor subunit beta (NCBI) | compare |
| b1063 | yceB | -1.6 | -2.3 | predicted lipoprotein (NCBI) | compare |
| b3390 | aroK | -1.6 | -2.0 | shikimate kinase I (NCBI) | compare |
| b3462 | ftsX | -1.6 | -4.8 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2567 | rnc | -1.6 | -2.0 | ribonuclease III (NCBI) | compare |
| b3935 | priA | -1.5 | -2.8 | primosome assembly protein PriA (NCBI) | compare |
| b0890 | ftsK | -1.5 | -5.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1257 | yciE | -1.5 | -2.2 | hypothetical protein (NCBI) | compare |
| b2894 | xerD | -1.5 | -1.6 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0866 | ybjQ | -1.5 | -1.5 | hypothetical protein (NCBI) | compare |
| b1712 | ihfA | -1.4 | -2.9 | integration host factor subunit alpha (NCBI) | compare |
| b0782 | moaB | -1.4 | -2.2 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b1545 | pinQ | -1.4 | -1.6 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1358 | ydaT | -1.4 | -1.9 | Rac prophage; predicted protein (NCBI) | compare |
| b0118 | acnB | -1.4 | -2.5 | aconitate hydratase (NCBI) | compare |
| b3021 | ygiT | -1.4 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2055 | wcaE | -1.4 | -3.3 | predicted glycosyl transferase (NCBI) | compare |
| b1942 | fliJ | -1.4 | -1.4 | flagellar biosynthesis chaperone (NCBI) | compare |
| b0741 | pal | -1.3 | -3.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3229 | sspA | -1.3 | -3.2 | stringent starvation protein A (NCBI) | compare |
| b0738 | tolR | -1.3 | -2.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0080 | fruR | -1.3 | -4.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3613 | yibP | -1.3 | -4.4 | putative membrane protein (VIMSS) | compare |
| b2518 | ndk | -1.3 | -2.1 | nucleoside diphosphate kinase (NCBI) | compare |
| b0739 | tolA | -1.3 | -3.4 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3911 | cpxA | -1.3 | -7.3 | two-component sensor protein (NCBI) | compare |
| b3725 | pstB | -1.2 | -2.1 | phosphate transporter subunit (NCBI) | compare |
| b4163 | glyV | -1.2 | -1.1 | tRNA-Gly (NCBI) | compare |
| b0683 | fur | -1.2 | -1.4 | ferric uptake regulator (NCBI) | compare |
| b0721 | sdhC | -1.2 | -3.4 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0500 | ybbD | -1.2 | -2.1 | hypothetical protein (RefSeq) | compare |
| b2288 | nuoA | -1.2 | -2.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b4201 | priB | -1.2 | -1.5 | primosomal replication protein N (NCBI) | compare |
| b0407 | yajC | -1.2 | -2.5 | preprotein translocase subunit YajC (NCBI) | compare |
| b3290 | trkA | -1.2 | -2.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0740 | tolB | -1.2 | -3.4 | translocation protein TolB precursor (NCBI) | compare |
| b1252 | tonB | -1.2 | -2.4 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0200 | gmhB | -1.2 | -1.3 | hypothetical protein (NCBI) | compare |
| b0949 | uup | -1.2 | -5.2 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3839 | tatC | -1.2 | -6.0 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1926 | fliT | -1.1 | -2.2 | predicted chaperone (NCBI) | compare |
| b2071 | yegJ | -1.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b2569 | lepA | -1.1 | -3.3 | GTP-binding protein LepA (NCBI) | compare |
| b0219 | yafV | -1.1 | -2.4 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b2110 | yehC | -1.1 | -2.8 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b1642 | slyA | -1.1 | -1.6 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0430 | cyoC | -1.1 | -2.6 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b0630 | lipB | -1.1 | -1.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2652 | ileY | -1.1 | -4.0 | tRNA-Ile (NCBI) | compare |
| b0737 | tolQ | -1.1 | -2.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1730 | ydjO | -1.1 | -2.3 | predicted protein (RefSeq) | compare |
| b1363 | trkG | -1.1 | -3.6 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b0728 | sucC | -1.1 | -3.7 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0722 | sdhD | -1.1 | -2.9 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2277 | nuoM | -1.1 | -4.0 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3726 | pstA | -1.1 | -4.0 | phosphate transporter subunit (NCBI) | compare |
| b3204 | ptsN | -1.0 | -3.5 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1130 | phoP | -1.0 | -4.4 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3035 | tolC | -1.0 | -5.0 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1523 | yneG | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -1.0 | -1.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0723 | sdhA | -1.0 | -5.5 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b3616 | tdh | -1.0 | -3.7 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b4202 | rpsR | -1.0 | -1.5 | 30S ribosomal protein S18 (NCBI) | compare |
| b3617 | kbl | -1.0 | -4.5 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b4146 | yjeK | -1.0 | -2.1 | predicted lysine aminomutase (NCBI) | compare |
| b0113 | pdhR | -1.0 | -2.9 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b2822 | recC | -1.0 | -3.3 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2281 | nuoI | -1.0 | -1.6 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1144 | ymfJ | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4590 | ybfK | -1.0 | -3.7 | hypothetical protein (RefSeq) | compare |
| b1323 | tyrR | -1.0 | -3.0 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b1164 | ycgZ | -1.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b2340 | sixA | -1.0 | -2.6 | phosphohistidine phosphatase (NCBI) | compare |
| b2363 | yfdT | -1.0 | -2.1 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3652 | recG | -1.0 | -5.3 | ATP-dependent DNA helicase (NCBI) | compare |
| b1286 | rnb | -1.0 | -2.3 | exoribonuclease II (NCBI) | compare |
| b3728 | pstS | -0.9 | -2.7 | phosphate transporter subunit (NCBI) | compare |
| b0429 | cyoD | -0.9 | -2.6 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b4505 | insX | -0.9 | -1.1 | predicted IS protein (RefSeq) | compare |
| b0767 | ybhE | -0.9 | -2.5 | 6-phosphogluconolactonase (NCBI) | compare |
| b1576 | ydfD | -0.9 | -1.9 | Qin prophage; predicted protein (NCBI) | compare |
| b3500 | gor | -0.9 | -1.0 | glutathione reductase (NCBI) | compare |
| b1409 | ynbB | -0.9 | -3.9 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b2279 | nuoK | -0.9 | -1.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0406 | tgt | -0.9 | -4.0 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3741 | gidA | -0.9 | -4.0 | glucose-inhibited division protein A (NCBI) | compare |
| b1497 | b1497 | -0.9 | -2.6 | putative enzyme (VIMSS) | compare |
| b4451 | ryhB | -0.9 | -1.0 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b4685 | yrbN | -0.9 | -1.9 | expressed protein (RefSeq) | compare |
| b2804 | fucU | -0.9 | -1.9 | L-fucose mutarotase (NCBI) | compare |
| b4208 | cycA | -0.9 | -4.8 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b2284 | nuoF | -0.9 | -2.6 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2990 | hybG | -0.9 | -1.7 | hydrogenase 2 accessory protein (NCBI) | compare |
| b2330 | yfcB | -0.9 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b1293 | sapB | -0.9 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2934 | cmtB | -0.9 | -1.9 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4180 | rlmB | -0.9 | -3.8 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b2006 | yeeW | -0.8 | -2.2 | CP4-44 prophage; predicted protein (RefSeq) | compare |
| b0729 | sucD | -0.8 | -1.8 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1167 | ymgC | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b2435 | amiA | -0.8 | -2.9 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b2209 | eco | -0.8 | -1.0 | ecotin precursor (NCBI) | compare |
| b3398 | yrfF | -0.8 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b1259 | yciG | -0.8 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2352 | yfdI | -0.8 | -2.0 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b3649 | rpoZ | -0.8 | -1.7 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3026 | qseC | -0.8 | -2.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1095 | fabF | -0.8 | -3.6 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0237 | pepD | -0.8 | -4.0 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b1129 | phoQ | -0.8 | -3.9 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0720 | gltA | -0.8 | -3.0 | citrate synthase (NCBI) | compare |
| b1058 | yceO | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b4042 | dgkA | -0.8 | -1.9 | diacylglycerol kinase (NCBI) | compare |
| b3791 | rffA | -0.8 | -4.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2597 | yfiA | -0.8 | -1.2 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b1185 | dsbB | -0.8 | -1.6 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0506 | allR | -0.8 | -3.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0001 | thrL | -0.8 | -1.1 | thr operon leader peptide (NCBI) | compare |
| b0222 | lpcA | -0.8 | -1.7 | phosphoheptose isomerase (NCBI) | compare |
| b0400 | phoR | -0.8 | -4.3 | sensory histidine kinase in two-component regulatory system with PhoB (NCBI) | compare |
| b2847 | yqeI | -0.8 | -3.9 | predicted transcriptional regulator (NCBI) | compare |
| b3836 | b3836 | -0.8 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1433 | b1433 | -0.8 | -2.6 | putative membrane transport protein (VIMSS) | compare |
| b4651 | yibW | -0.8 | -1.2 | no description | compare |
| b0542 | renD | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4497 | yeeL | -0.8 | -3.2 | no description | compare |
| b4613 | dinQ | -0.8 | -1.2 | Damage inducible, function unknown (RefSeq) | compare |
| b2276 | nuoN | -0.8 | -2.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1357 | ydaS | -0.8 | -1.5 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4593 | ymgI | -0.8 | -1.5 | hypothetical protein (RefSeq) | compare |
| b4177 | purA | -0.8 | -1.7 | adenylosuccinate synthetase (NCBI) | compare |
| b1351 | racC | -0.8 | -2.0 | Rac prophage; predicted protein (NCBI) | compare |
| b1090 | plsX | -0.8 | -2.6 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b2625 | yfjI | -0.7 | -3.2 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1086 | rluC | -0.7 | -2.9 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3169 | nusA | -0.7 | -1.4 | transcription elongation factor NusA (NCBI) | compare |
| b3483 | yhhH | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1125 | potB | -0.7 | -2.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0724 | sdhB | -0.7 | -2.7 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b4660 | yhiL | -0.7 | -1.7 | no description | compare |
| b1290 | sapF | -0.7 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4509 | ylcG | -0.7 | -1.9 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1946 | fliN | -0.7 | -2.0 | flagellar motor switch protein (NCBI) | compare |
| b2897 | ygfY | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b0548 | ninE | -0.7 | -1.9 | DLP12 prophage; conserved protein (NCBI) | compare |
| b4410 | ecnA | -0.7 | -0.8 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1536 | ydeI | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b1462 | b1462 | -0.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0432 | cyoA | -0.7 | -4.1 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b2058 | wcaB | -0.7 | -0.8 | predicted acyl transferase (NCBI) | compare |
| b0431 | cyoB | -0.7 | -4.0 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3807 | cyaY | -0.7 | -2.8 | frataxin-like protein (NCBI) | compare |
| b2025 | hisF | -0.7 | -1.8 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b1951 | rcsA | -0.7 | -2.1 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1548 | nohA | -0.7 | -0.9 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b4546 | ypeB | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b4253 | yjgL | -0.7 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b1008 | ycdI | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b4191 | ulaR | -0.7 | -2.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0232 | yafN | -0.7 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0212 | gloB | -0.7 | -1.4 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b2642 | yfjW | -0.7 | -1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3869 | glnL | -0.7 | -3.2 | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | compare |
| b1530 | marR | -0.7 | -1.7 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b3790 | rffC | -0.7 | -2.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2498 | upp | -0.7 | -1.7 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0279 | yagM | -0.7 | -2.8 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b1399 | paaX | -0.7 | -1.5 | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI) | compare |
| b1841 | yobA | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b0920 | ycbC | -0.7 | -1.9 | conserved inner membrane protein (NCBI) | compare |
| b4222 | ytfP | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b0850 | ybjC | -0.6 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b4533 | ynfO | -0.6 | -1.2 | Qin prophage; predicted protein (NCBI) | compare |
| b4128 | yjdK | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |