Experiment set2IT079 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Carbenicillin disodium salt 0.0015 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_19005 +6.2 43.4 SusC/RagA family TonB-linked outer membrane protein compare
CA264_08105 +4.2 22.6 NupC/NupG family nucleoside CNT transporter compare
CA264_19885 +3.7 22.2 uridine kinase compare
CA264_15255 +3.3 21.0 alpha/beta hydrolase compare
CA264_17450 +3.2 8.0 acyl-CoA thioesterase compare
CA264_17445 +3.1 7.4 peptidase M28 compare
CA264_05275 +2.9 5.8 MFS transporter compare
CA264_06095 +2.7 4.9 hypothetical protein compare
CA264_10855 +2.5 3.5 cell division protein compare
CA264_12515 +2.5 10.0 YebC/PmpR family DNA-binding transcriptional regulator compare
CA264_18120 +2.2 14.8 ABC transporter compare
CA264_13170 +2.1 5.8 hypothetical protein compare
CA264_13665 +2.0 7.9 hypothetical protein compare
CA264_19685 +1.9 2.5 DNA-binding response regulator compare
CA264_14740 +1.9 7.8 dihydroorotase compare
CA264_14480 +1.9 8.1 large-conductance mechanosensitive channel compare
CA264_13660 +1.9 6.7 putative DNA modification/repair radical SAM protein compare
CA264_11970 +1.8 4.0 hypothetical protein compare
CA264_00725 +1.7 7.1 pyruvate kinase compare
CA264_17320 +1.7 12.7 hypothetical protein compare
CA264_15340 +1.7 4.1 hypothetical protein compare
CA264_07245 +1.7 7.4 hypothetical protein compare
CA264_07750 +1.6 3.2 elongation factor P compare
CA264_07495 +1.6 3.2 GTP-binding protein YchF compare
CA264_13340 +1.6 3.9 iron-sulfur cluster assembly accessory protein compare
CA264_18060 +1.6 8.8 hypothetical protein compare
CA264_17455 +1.6 10.2 hypothetical protein compare
CA264_17560 +1.6 10.4 hypothetical protein compare
CA264_01820 +1.5 5.4 hypothetical protein compare
CA264_14875 +1.5 12.6 hypothetical protein compare
CA264_08090 +1.5 8.8 short-chain dehydrogenase compare
CA264_16965 +1.5 9.3 hypothetical protein compare
CA264_19010 +1.5 5.5 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_13470 +1.4 1.5 cysteine synthase A compare
CA264_03445 +1.4 8.9 anhydro-N-acetylmuramic acid kinase compare
CA264_14920 +1.4 8.4 hypothetical protein compare
CA264_10860 +1.4 1.2 hypothetical protein compare
CA264_08025 +1.4 11.0 GMP synthase (glutamine-hydrolyzing) compare
CA264_18055 +1.4 8.7 hypothetical protein compare
CA264_12490 +1.4 8.0 phosphohydrolase compare
CA264_08690 +1.3 10.4 dipeptide epimerase compare
CA264_10255 +1.3 3.6 hypothetical protein compare
CA264_11620 +1.3 9.1 hypothetical protein compare
CA264_00835 +1.3 4.9 hypothetical protein compare
CA264_18860 +1.3 9.7 TIGR00374 family protein compare
CA264_19750 +1.3 5.9 IMP dehydrogenase compare
CA264_11245 +1.3 4.1 hypothetical protein compare
CA264_09340 +1.3 7.7 hypothetical protein compare
CA264_06460 +1.3 4.6 NUDIX domain-containing protein compare
CA264_06475 +1.3 1.6 hypothetical protein compare
CA264_06260 +1.2 4.8 N-acetyltransferase compare
CA264_20715 +1.2 5.0 metallophosphatase compare
CA264_05240 +1.2 6.6 glycerol acyltransferase compare
CA264_07790 +1.2 9.3 ankryin compare
CA264_10900 +1.2 7.4 hypothetical protein compare
CA264_04835 +1.2 8.7 ABC transporter ATP-binding protein compare
CA264_01385 +1.2 7.5 iron ABC transporter substrate-binding protein compare
CA264_00170 +1.2 4.2 ATP:cob(I)alamin adenosyltransferase compare
CA264_18135 +1.2 5.7 ABC transporter ATP-binding protein compare
CA264_09050 +1.2 7.0 hypothetical protein compare
CA264_06630 +1.2 2.8 hypothetical protein compare
CA264_07800 +1.2 6.7 hypothetical protein compare
CA264_01545 +1.1 2.1 3-deoxy-7-phosphoheptulonate synthase compare
CA264_13385 +1.1 5.9 hypoxanthine phosphoribosyltransferase compare
CA264_19150 +1.1 7.7 TonB dependent receptor compare
CA264_14805 +1.1 2.9 DNA-binding protein compare
CA264_14475 +1.1 5.6 hypothetical protein compare
CA264_15055 +1.1 5.5 MarR family transcriptional regulator compare
CA264_17075 +1.1 4.4 pterin-4-alpha-carbinolamine dehydratase compare
CA264_00165 +1.1 5.3 macrolide ABC transporter ATP-binding protein compare
CA264_02255 +1.1 6.0 hypothetical protein compare
CA264_08100 +1.1 4.6 ABC transporter ATP-binding protein compare
CA264_01990 +1.1 2.4 tRNA-Lys compare
CA264_08095 +1.1 7.6 ABC transporter permease compare
CA264_02715 +1.0 5.3 UDP-glucose--dolichyl-phosphate glucosyltransferase compare
CA264_07460 +1.0 8.1 hypothetical protein compare
CA264_13670 +1.0 2.2 DNA starvation/stationary phase protection protein compare
CA264_11250 +1.0 8.2 hypothetical protein compare
CA264_11865 +1.0 4.3 hypothetical protein compare
CA264_04350 +1.0 3.9 alanine dehydrogenase compare
CA264_19030 +1.0 4.0 ribosomal subunit interface protein compare
CA264_05910 +1.0 2.8 RNA helicase compare
CA264_00540 +1.0 7.3 translational GTPase TypA compare
CA264_10920 +1.0 7.4 helix-turn-helix-type transcriptional regulator compare
CA264_20700 +1.0 5.8 hypothetical protein compare
CA264_08140 +1.0 4.8 oxidoreductase compare
CA264_15115 +1.0 1.0 hypothetical protein compare
CA264_07150 +1.0 3.3 elongation factor 4 compare
CA264_09285 +1.0 4.1 anti-anti-sigma factor compare
CA264_01905 +1.0 5.1 cystathionine beta-synthase compare
CA264_00040 +1.0 6.7 hypothetical protein compare
CA264_05640 +0.9 6.8 transporter compare
CA264_12070 +0.9 3.7 tRNA dimethylallyltransferase compare
CA264_15670 +0.9 1.4 DUF4295 domain-containing protein compare
CA264_14195 +0.9 5.7 1-pyrroline-5-carboxylate dehydrogenase compare
CA264_08320 +0.9 2.8 hypothetical protein compare
CA264_14200 +0.9 1.1 NADH-quinone oxidoreductase subunit A compare
CA264_08125 +0.9 4.7 tetratricopeptide repeat protein compare
CA264_15250 +0.9 4.5 cbs domain containing protein compare
CA264_14865 +0.9 5.7 peptidase dimerization domain protein compare
CA264_05150 +0.9 4.9 response regulator compare
CA264_06285 +0.9 2.0 N-acetyltransferase compare
CA264_17885 +0.9 1.6 GAF domain-containing protein compare
CA264_20680 +0.9 3.4 hypothetical protein compare
CA264_03750 +0.9 7.2 hypothetical protein compare
CA264_18245 +0.9 2.9 NADH-quinone oxidoreductase subunit A compare
CA264_17900 +0.9 6.0 UDP-N-acetyl-D-galactosamine dehydrogenase compare
CA264_01490 +0.9 6.1 DUF4199 domain-containing protein compare
CA264_02180 +0.9 2.1 response regulator compare
CA264_07465 +0.9 3.0 hypothetical protein compare
CA264_13165 +0.9 3.3 arylesterase compare
CA264_15290 +0.9 6.7 alpha/beta hydrolase compare
CA264_15950 +0.9 2.8 hypothetical protein compare
CA264_18350 +0.8 4.9 hypothetical protein compare
CA264_05635 +0.8 5.3 efflux transporter periplasmic adaptor subunit compare
CA264_02160 +0.8 4.2 hypothetical protein compare
CA264_01390 +0.8 4.5 iron ABC transporter permease compare
CA264_15965 +0.8 3.3 hypothetical protein compare
CA264_00865 +0.8 3.4 dihydroorotate dehydrogenase (quinone) compare
CA264_06255 +0.8 3.6 argininosuccinate synthase compare
CA264_21060 +0.8 6.0 hypothetical protein compare
CA264_11305 +0.8 3.9 transcriptional regulator compare
CA264_06250 +0.8 1.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
CA264_20710 +0.8 2.8 hypothetical protein compare
CA264_17755 +0.8 5.7 ABC transporter compare
CA264_04370 +0.8 4.2 acyl transferase compare
CA264_14835 +0.8 5.9 hypothetical protein compare
CA264_12030 +0.8 3.8 aspartate aminotransferase family protein compare
CA264_10870 +0.8 2.0 division/cell wall cluster transcriptional repressor MraZ compare
CA264_19845 +0.8 5.1 hypothetical protein compare
CA264_02260 +0.8 5.1 hypothetical protein compare
CA264_13130 +0.8 3.8 peptidase S1 compare
CA264_17495 +0.8 4.2 hypothetical protein compare
CA264_08120 +0.8 5.4 electron transfer flavoprotein subunit alpha compare
CA264_02270 +0.8 5.7 efflux transporter periplasmic adaptor subunit compare
CA264_08870 +0.8 3.0 imidazolonepropionase compare
CA264_16145 +0.8 5.7 copper transporter compare
CA264_02680 +0.8 2.2 RNA polymerase subunit sigma-70 compare
CA264_06090 +0.8 2.4 hypothetical protein compare
CA264_16335 +0.8 2.4 hypothetical protein compare
CA264_05930 +0.8 2.1 glyoxalase compare
CA264_05645 +0.8 3.7 L-serine dehydratase, iron-sulfur-dependent subunit beta compare
CA264_15520 +0.8 3.2 hypothetical protein compare
CA264_12770 +0.8 1.5 hypothetical protein compare
CA264_17760 +0.8 6.3 leucine dehydrogenase compare
CA264_05535 +0.8 5.5 hypothetical protein compare
CA264_06470 +0.7 3.5 YfcE family phosphodiesterase compare
CA264_17790 +0.7 3.1 hypothetical protein compare
CA264_05020 +0.7 3.9 hypothetical protein compare
CA264_14470 +0.7 3.4 hypothetical protein compare
CA264_05360 +0.7 3.8 ABC transporter compare
CA264_19675 +0.7 3.8 RNA pseudouridine synthase compare
CA264_15845 +0.7 3.1 hypothetical protein compare
CA264_18495 +0.7 3.7 four helix bundle protein compare
CA264_12960 +0.7 6.0 peptidase M13 compare
CA264_05025 +0.7 2.9 ATP phosphoribosyltransferase compare
CA264_13495 +0.7 3.8 aldehyde dehydrogenase compare
CA264_15690 +0.7 2.6 hypothetical protein compare
CA264_15880 +0.7 1.0 5-formyltetrahydrofolate cyclo-ligase compare
CA264_07285 +0.7 5.5 alpha-amlyase compare
CA264_10965 +0.7 4.6 oligoendopeptidase F compare
CA264_15970 +0.7 2.8 hypothetical protein compare
CA264_14320 +0.7 0.9 tRNA-specific adenosine deaminase compare
CA264_06465 +0.7 3.1 orotate phosphoribosyltransferase compare
CA264_20375 +0.7 2.2 hypothetical protein compare
CA264_14915 +0.7 4.4 MFS transporter compare
CA264_02945 +0.7 2.4 hypothetical protein compare
CA264_13220 +0.7 3.5 kazal domain protein compare
CA264_16905 +0.7 2.8 hypothetical protein compare
CA264_15960 +0.7 3.5 hypothetical protein compare
CA264_19450 +0.7 3.7 type I methionyl aminopeptidase compare
CA264_20555 +0.7 2.0 6-pyruvoyl tetrahydrobiopterin synthase compare
CA264_19960 +0.7 2.7 NUDIX hydrolase compare
CA264_01810 +0.7 3.3 hypothetical protein compare
CA264_14815 +0.7 0.9 transcriptional regulator compare
CA264_20060 +0.7 1.0 ribosome silencing factor RsfS compare
CA264_10895 +0.7 2.9 hypothetical protein compare
CA264_01445 +0.7 1.3 hypothetical protein compare
CA264_10880 +0.7 3.3 hypothetical protein compare
CA264_17390 +0.7 2.1 hypothetical protein compare
CA264_03440 +0.7 2.3 DoxX family protein compare
CA264_15710 +0.7 4.0 hypothetical protein compare
CA264_13515 +0.7 2.0 glyoxalase/bleomycin resistance/dioxygenase family protein compare
CA264_16400 +0.7 3.8 bifunctional phosphoglucose/phosphomannose isomerase compare
CA264_15590 +0.7 1.8 metal-dependent hydrolase compare
CA264_21550 +0.7 4.1 hypothetical protein compare
CA264_14840 +0.7 5.6 hypothetical protein compare
CA264_07275 +0.7 3.7 hypothetical protein compare
CA264_21070 +0.7 3.4 transcriptional repressor compare
CA264_20925 +0.6 1.3 hypothetical protein compare
CA264_05070 +0.6 3.6 indole-3-glycerol phosphate synthase compare
CA264_02055 +0.6 0.9 hypothetical protein compare
CA264_08820 +0.6 3.8 histidine phosphatase family protein compare
CA264_02860 +0.6 1.9 hypothetical protein compare
CA264_17830 +0.6 3.1 transcriptional regulator compare
CA264_11995 +0.6 2.3 hypothetical protein compare
CA264_07125 +0.6 3.5 6-carboxytetrahydropterin synthase QueD compare
CA264_03165 +0.6 4.2 acyl-CoA desaturase compare
CA264_17460 +0.6 4.8 hypothetical protein compare
CA264_08150 +0.6 4.5 radical SAM protein compare


Specific Phenotypes

For 17 genes in this experiment

For stress Carbenicillin disodium salt in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Carbenicillin disodium salt across organisms