Experiment set2IT078 for Agrobacterium fabrum C58

Compare to:

Cellotetraose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.8 -6.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu1850 -7.8 -5.4 phosphoribosylformylglycinamidine synthetase II compare
Atu2289 -7.6 -9.1 anthranilate synthase component I and II compare
Atu0486 -7.6 -5.2 dihydroorotate dehydrogenase compare
Atu1205 -7.5 -7.3 threonine dehydratase compare
Atu0099 -7.5 -7.3 prephenate dehydratase compare
Atu1307 -7.4 -7.3 dihydroorotase compare
Atu1141 -7.3 -7.1 Phosphoribosylglycinamide synthetase compare
Atu2264 -7.2 -8.6 2-isopropylmalate synthase compare
Atu2726 -7.2 -16.1 pyruvate carboxylase compare
Atu1687 -7.1 -10.9 anthranilate phosphoribosyltransferase compare
Atu0679 -6.9 -4.8 ATP phosphoribosyltransferase compare
Atu2709 -6.9 -16.1 3-isopropylmalate dehydratase, large subunit compare
Atu3784 -6.9 -25.1 glutamate synthase large subunit compare
Atu2747 -6.9 -14.0 hypothetical protein compare
Atu0038 -6.8 -5.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1844 -6.8 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu2791 -6.8 -8.1 3-isopropylmalate dehydrogenase compare
Atu3783 -6.8 -17.5 glutamate synthase subunit beta compare
Atu2036 -6.7 -11.2 acetolactate synthase III, large subunit compare
Atu3706 -6.7 -6.5 D-3-phosphoglycerate dehydrogenase compare
Atu1308 -6.6 -7.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3885 -6.6 -6.4 inositol monophosphatase compare
Atu0298 -6.4 -7.7 orotidine 5 compare
Atu0432 -6.2 -10.4 O-succinylhomoserine sulfhydrylase compare
Atu1140 -6.2 -5.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu0400 -6.1 -5.9 orotate phosphoribosyltransferase compare
Atu3754 -6.0 -8.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2040 -6.0 -5.8 phosphoserine phosphatase compare
Atu0017 -5.9 -4.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1688 -5.9 -5.7 indole-3-glycerol-phosphate synthase compare
Atu0647 -5.8 -4.0 phosphoribosylamine--glycine ligase compare
Atu1588 -5.8 -11.1 homoserine dehydrogenase compare
Atu3755 -5.8 -5.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0399 -5.7 -7.9 dihydroorotase compare
Atu0678 -5.6 -5.5 histidyl-tRNA synthetase compare
Atu0537 -5.6 -6.7 histidinol dehydrogenase compare
Atu1075 -5.6 -8.5 amidophosphoribosyltransferase compare
Atu0184 -5.3 -3.7 glucokinase compare
Atu2650 -5.3 -14.1 glycerol-3-phosphate dehydrogenase compare
Atu2718 -5.3 -8.8 homoserine O-succinyltransferase compare
Atu2790 -5.2 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu4075 -5.1 -8.3 glycogen synthase compare
Atu0043 -5.1 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu1845 -5.0 -4.2 phosphoribosylformylglycinamidine synthase I compare
Atu1686 -5.0 -15.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0041 -4.9 -3.4 glutamine amidotransferase compare
Atu1030 -4.8 -3.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3469 -4.8 -3.3 phosphoglyceromutase compare
Atu2015 -4.7 -10.9 aminotransferase compare
Atu0792 -4.5 -9.6 hypothetical protein compare
Atu3482 -4.5 -10.7 pantoate--beta-alanine ligase compare
Atu3739 -4.3 -4.4 phosphoglycerate kinase compare
Atu0185 -4.3 -4.6 methylglyoxal synthase compare
Atu2548 -4.3 -19.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1446 -4.2 -3.9 two component response regulator compare
Atu0598 -4.0 -13.1 phosphogluconate dehydratase compare
Atu1589 -4.0 -8.0 aminotransferase, class I compare
Atu3483 -3.9 -8.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3289 -3.5 -5.3 thiamine-phosphate pyrophosphorylase compare
Atu3731 -3.3 -10.3 5-formyltetrahydrofolate cyclo-ligase compare
Atu4096 -3.2 -11.0 nicotinate-nucleotide pyrophosphorylase compare
Atu2155 -3.1 -19.6 methionine synthase compare
Atu0030 -3.0 -2.7 phosphocarrier protein HPr compare
Atu0641 -2.9 -5.7 hypothetical protein compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3997 -2.8 -15.0 biotin synthetase compare
Atu4001 -2.8 -12.1 3-oxoacyl-ACP synthase compare
Atu3288 -2.8 -9.0 hydroxyethylthiazole kinase compare
Atu3998 -2.8 -15.2 8-amino-7-oxononanoate synthase compare
Atu4097 -2.8 -12.5 L-aspartate oxidase compare
Atu4098 -2.8 -12.0 quinolinate synthetase compare
Atu1456 -2.7 -12.2 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1455 -2.7 -4.0 hypothetical protein compare
Atu0769 -2.7 -3.6 protoheme IX farnesyltransferase compare
Atu1463 -2.7 -7.1 glycine cleavage system component H compare
Atu4000 -2.6 -15.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu1454 -2.6 -9.5 siroheme synthase compare
Atu2569 -2.6 -15.1 thiamine biosynthesis protein compare
Atu2127 -2.4 -9.0 L-carnitine dehydratase compare
Atu1359 -2.3 -1.9 dnaK deletion suppressor protein compare
Atu3999 -2.3 -3.9 dithiobiotin synthetase compare
Atu0029 -2.3 -7.8 S-adenosylhomocysteine hydrolase compare
Atu1464 -2.3 -7.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu1462 -2.2 -11.4 glycine cleavage system protein P2 compare
Atu3290 -2.2 -9.0 phosphomethylpyrimidine kinase compare
Atu2205 -2.2 -6.7 transcriptional regulator, MarR family compare
Atu1748 -2.1 -9.6 NIFU-like protein compare
Atu0876 -2.1 -1.8 superoxide dismutase compare
Atu4375 -2.1 -9.5 hypothetical protein compare
Atu4374 -2.0 -6.4 hypothetical protein compare
Atu4616 -2.0 -2.9 dTDP-4-dehydrorhamnose reductase compare
Atu1457 -1.9 -2.3 hypothetical protein compare
Atu1685 -1.9 -1.7 hypothetical protein compare
Atu1526 -1.9 -8.4 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu1604 -1.8 -11.5 poly-beta-hydroxybutyrate synthase compare
Atu2209 -1.8 -5.2 pyrroline-5-carboxylate reductase compare
Atu0039 -1.8 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu4773 -1.8 -1.3 two component response regulator compare
Atu4373 -1.7 -8.2 LacI family transcriptional regulator compare
Atu0723 -1.7 -2.3 FAD dependent oxidoreductase compare
Atu0434 -1.7 -3.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu8115 -1.7 -3.9 Hypothetical Protein compare
Atu4372 -1.6 -6.6 ribose ABC transporter permease compare
Atu4371 -1.5 -5.9 sugar ABC transporter permease compare
Atu6098 -1.5 -1.0 transcriptional regulator, HTH family compare
Atu3763 -1.5 -1.5 hypothetical protein compare
Atu2368 -1.5 -1.7 hypothetical protein compare
Atu0346 -1.4 -4.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4370 -1.4 -8.7 sugar ABC transporter ATPase compare
Atu4369 -1.4 -6.2 sugar ABC transporter substrate-binding protein compare
Atu6114 -1.4 -2.7 hypothetical protein compare
Atu1572 -1.4 -6.2 hydrolase compare
Atu0332 -1.3 -8.2 RNA polymerase sigma-54 factor compare
Atu0189 -1.3 -2.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2554 -1.3 -2.7 lysyl-tRNA synthetase compare
Atu3908 -1.3 -7.1 GntR family transcriptional regulator compare
Atu2807 -1.3 -5.8 cob(I)alamin adenosyltransferase compare
Atu4317 -1.3 -2.6 TetR family transcriptional regulator compare
Atu4711 -1.3 -4.4 two component sensor kinase compare
Atu1891 -1.2 -2.9 cobalamin biosynthesis protein compare
Atu1620 -1.2 -8.1 triosephosphate isomerase compare
Atu0188 -1.2 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2801 -1.2 -4.2 precorrin-2 C20 methyltransferase compare
Atu0107 -1.1 -3.0 hypothetical protein compare
Atu2809 -1.1 -7.2 cobalamin biosynthesis protein compare
Atu2555 -1.1 -3.1 L-lysine 2,3-aminomutase compare
Atu2267 -1.1 -4.7 hypothetical protein compare
Atu2805 -1.0 -4.9 cobalamin synthesis protein compare
Atu2797 -1.0 -2.6 cobalamin biosynthesis protein compare
Atu0977 -1.0 -4.6 serine protease DO-like protease compare
Atu0601 -1.0 -6.3 oxidoreductase compare
Atu1542 -1.0 -5.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2124 -1.0 -4.5 transcriptional regulator, ArsR family compare
Atu1774 -1.0 -5.4 ABC transporter, substrate binding protein (peptide) compare
Atu0501 -1.0 -7.0 acyl-CoA dehydrogenase compare
Atu2123 -1.0 -5.3 methylenetetrahydrofolate reductase compare
Atu0590 -1.0 -5.7 transcriptional regulator repressor compare
Atu3712 -1.0 -1.5 hypothetical protein compare
Atu2770 -1.0 -4.4 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2808 -1.0 -6.0 cobyric acid synthase compare
Atu2821 -1.0 -4.5 transcriptional regulator, GntR family compare
Atu0976 -1.0 -2.0 cycL protein compare
Atu3730 -0.9 -1.4 hypothetical protein compare
Atu2796 -0.9 -3.6 precorrin-4 C11-methyltransferase compare
Atu2067 -0.9 -0.9 hypothetical protein compare
Atu2804 -0.9 -7.2 cobaltochelatase subunit compare
Atu2800 -0.9 -1.6 precorrin-3B C17-methyltransferase compare
Atu3468 -0.9 -1.0 hypothetical protein compare
Atu2795 -0.9 -4.7 cobalamin biosynthetic protein compare
Atu3496 -0.9 -3.5 hypothetical protein compare
Atu0141 -0.9 -1.7 cytochrome O ubiquinol oxidase subunit I compare
Atu1445 -0.9 -2.7 two component sensor kinase compare
Atu2207 -0.9 -1.9 two component sensor kinase compare
Atu0503 -0.9 -6.3 enoyl-CoA hydratase compare
Atu4072 -0.9 -1.9 nodulation protein N compare
Atu1705 -0.9 -2.4 SEC-independent protein translocase protein compare
Atu3750 -0.8 -2.6 thiamine-phosphate pyrophosphorylase compare
Atu3733 -0.8 -2.5 hypothetical protein compare
Atu3598 -0.8 -2.1 thiol:disulfide interchange protein compare
Atu3342 -0.8 -4.5 trehalose utilization-like protein compare
Atu2484 -0.8 -1.8 hypothetical protein compare
Atu5467 -0.8 -2.1 hypothetical protein compare
Atu2020 -0.8 -2.5 transcriptional regulator, TetR family compare
Atu1364 -0.8 -3.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu5142 -0.8 -1.5 hypothetical protein compare
Atu3287 -0.8 -2.5 thiamine biosynthesis associated protein compare
Atu3343 -0.8 -4.3 trehalose utilization-like protein compare
Atu8034 -0.8 -3.6 hypothetical protein compare
Atu1339 -0.8 -2.4 ribonuclease E compare
Atu2201 -0.8 -2.0 hydrolase compare
Atu0502 -0.8 -3.3 acetyl-CoA acetyltransferase compare
Atu0153 -0.8 -3.6 transcriptional regulator, Fur family compare
Atu0837 -0.8 -4.5 transcriptional regulator, MarR family compare
Atu0422 -0.8 -1.8 ABC transporter, membrane spanning protein compare
Atu2799 -0.8 -2.3 precorrin-6x reductase compare
Atu1983 -0.8 -3.3 hypothetical protein compare
Atu2802 -0.7 -3.5 precorrin-8X methylmutase compare
Atu1372 -0.7 -3.2 hypothetical protein compare
Atu0190 -0.7 -3.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0331 -0.7 -2.3 sigma-54 modulation protein compare
Atu8087 -0.7 -0.8 putative peptidoglycan binding protein compare
Atu5057 -0.7 -0.9 hypothetical protein compare
Atu1182 -0.7 -1.3 hypothetical protein compare
Atu2464 -0.7 -1.6 formyltetrahydrofolate deformylase compare
Atu3732 -0.7 -4.4 hemolysin compare
Atu4187 -0.7 -1.3 tRNA-Met compare
Atu0280 -0.7 -1.7 hypothetical protein compare
Atu1677 -0.7 -1.9 queuine tRNA-ribosyltransferase compare
Atu0767 -0.7 -2.5 cytochrome c oxidase subunit II compare
Atu1770 -0.7 -3.2 glutamine synthetase compare
Atu2810 -0.7 -5.0 cobalamin biosynthetic protein compare
Atu1904 -0.7 -2.8 transcriptional regulator compare
Atu2746 -0.7 -1.6 hypothetical protein compare
Atu4173 -0.7 -1.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu2684 -0.7 -1.5 hypothetical protein compare
Atu0926 -0.7 -2.9 hypothetical protein compare
Atu0405 -0.7 -5.0 long-chain-fatty-acid-CoA-ligase compare
Atu1725 -0.7 -1.8 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Cellotetraose in Agrobacterium fabrum C58

For carbon source Cellotetraose across organisms