Experiment set2IT075 for Agrobacterium fabrum C58

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.8 -6.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu1308 -8.0 -5.6 aspartate carbamoyl transferase catalytic subunit compare
Atu1307 -7.9 -5.5 dihydroorotase compare
Atu2709 -7.8 -9.3 3-isopropylmalate dehydratase, large subunit compare
Atu2650 -7.8 -9.2 glycerol-3-phosphate dehydrogenase compare
Atu1687 -7.8 -7.6 anthranilate phosphoribosyltransferase compare
Atu1845 -7.6 -5.2 phosphoribosylformylglycinamidine synthase I compare
Atu0099 -7.1 -7.0 prephenate dehydratase compare
Atu2726 -7.1 -16.6 pyruvate carboxylase compare
Atu2791 -7.1 -6.9 3-isopropylmalate dehydrogenase compare
Atu2264 -7.0 -10.8 2-isopropylmalate synthase compare
Atu2036 -7.0 -10.7 acetolactate synthase III, large subunit compare
Atu2718 -7.0 -4.8 homoserine O-succinyltransferase compare
Atu1075 -6.9 -4.8 amidophosphoribosyltransferase compare
Atu0400 -6.8 -4.7 orotate phosphoribosyltransferase compare
Atu2608 -6.7 -9.2 N-acetylglucosamine-6-phosphate deacetylase conserved
Atu0679 -6.7 -4.6 ATP phosphoribosyltransferase compare
Atu3706 -6.6 -7.9 D-3-phosphoglycerate dehydrogenase compare
Atu1205 -6.5 -11.7 threonine dehydratase compare
Atu1850 -6.5 -6.2 phosphoribosylformylglycinamidine synthetase II compare
Atu0432 -6.5 -8.9 O-succinylhomoserine sulfhydrylase compare
Atu0038 -6.5 -6.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0790 -6.4 -7.6 hypothetical protein compare
Atu3754 -6.4 -8.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2289 -6.3 -19.1 anthranilate synthase component I and II compare
Atu3755 -6.3 -4.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3483 -6.2 -7.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1141 -6.2 -8.4 Phosphoribosylglycinamide synthetase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu0486 -6.1 -7.3 dihydroorotate dehydrogenase compare
Atu0537 -6.0 -4.2 histidinol dehydrogenase compare
Atu3885 -6.0 -9.2 inositol monophosphatase compare
Atu0503 -6.0 -16.0 enoyl-CoA hydratase compare
Atu0399 -5.8 -5.7 dihydroorotase compare
Atu2606 -5.8 -8.9 transcriptional regulator, GntR family conserved
Atu0501 -5.8 -17.8 acyl-CoA dehydrogenase compare
Atu0030 -5.8 -2.3 phosphocarrier protein HPr compare
Atu2609 -5.8 -9.8 transcriptional regulator, ROK family compare
Atu2040 -5.7 -6.8 phosphoserine phosphatase compare
Atu0298 -5.6 -6.7 orotidine 5 compare
Atu0678 -5.6 -5.5 histidyl-tRNA synthetase compare
Atu0647 -5.6 -3.8 phosphoribosylamine--glycine ligase compare
Atu1588 -5.5 -9.9 homoserine dehydrogenase compare
Atu1140 -5.5 -6.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2604 -5.5 -15.4 oxidoreductase compare
Atu1462 -5.4 -14.5 glycine cleavage system protein P2 compare
Atu0031 -5.4 -2.2 PTS system, IIA component compare
Atu2601 -5.4 -15.2 ABC transporter, substrate binding protein (maltose) compare
Atu2602 -5.4 -10.8 ABC transporter, membrane spanning protein (maltose) compare
Atu1688 -5.3 -7.3 indole-3-glycerol-phosphate synthase compare
Atu2790 -5.2 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu2600 -5.1 -10.9 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu3482 -5.1 -12.3 pantoate--beta-alanine ligase compare
Atu2015 -5.0 -13.1 aminotransferase compare
Atu2607 -5.0 -11.5 glucosamine--fructose-6-phosphate aminotransferase conserved
Atu1456 -4.9 -12.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0043 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase compare
Atu1464 -4.9 -8.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu1359 -4.9 -2.0 dnaK deletion suppressor protein compare
Atu3739 -4.8 -3.8 phosphoglycerate kinase compare
Atu2603 -4.8 -9.1 ABC transporter, membrane spanning protein (maltose) compare
Atu0331 -4.8 -4.6 sigma-54 modulation protein compare
Atu0041 -4.8 -3.3 glutamine amidotransferase compare
Atu2155 -4.7 -21.3 methionine synthase compare
Atu0039 -4.7 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu2605 -4.7 -4.2 hypothetical protein compare
Atu0017 -4.6 -4.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1030 -4.6 -3.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1463 -4.5 -9.7 glycine cleavage system component H compare
Atu1844 -4.4 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu0502 -4.3 -8.6 acetyl-CoA acetyltransferase compare
Atu3783 -4.3 -15.0 glutamate synthase subunit beta compare
Atu2745 -4.1 -16.2 acetyl-coenzyme A synthetase compare
Atu1589 -4.1 -8.3 aminotransferase, class I compare
Atu1686 -4.0 -20.2 peptidyl-prolyl cis-trans isomerse D compare
Atu2747 -4.0 -15.7 hypothetical protein compare
Atu1454 -4.0 -8.2 siroheme synthase compare
Atu0062 -3.9 -11.1 transcriptional regulator, ROK family compare
Atu0405 -3.9 -19.5 long-chain-fatty-acid-CoA-ligase compare
Atu0641 -3.8 -5.0 hypothetical protein compare
Atu3731 -3.7 -11.0 5-formyltetrahydrofolate cyclo-ligase compare
Atu3784 -3.7 -26.9 glutamate synthase large subunit compare
Atu3469 -3.6 -4.2 phosphoglyceromutase compare
Atu0101 -3.4 -4.6 cytochrome c compare
Atu3908 -3.3 -16.5 GntR family transcriptional regulator compare
Atu4685 -3.3 -10.8 LacI family transcriptional regulator compare
Atu0769 -3.3 -3.3 protoheme IX farnesyltransferase compare
Atu2123 -3.3 -7.2 methylenetetrahydrofolate reductase compare
Atu4711 -3.3 -9.4 two component sensor kinase compare
Atu4773 -3.2 -3.1 two component response regulator compare
Atu2239 -3.2 -5.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2548 -2.9 -17.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1455 -2.9 -4.3 hypothetical protein compare
Atu2237 -2.9 -7.5 cytochrome c1 compare
Atu4096 -2.9 -12.1 nicotinate-nucleotide pyrophosphorylase compare
Atu3730 -2.9 -1.8 hypothetical protein compare
Atu1286 -2.8 -5.7 hypothetical protein compare
Atu0771 -2.8 -9.4 cytochrome c oxidase subunit III compare
Atu0040 -2.7 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2238 -2.7 -6.8 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1685 -2.7 -1.8 hypothetical protein compare
Atu4098 -2.7 -13.7 quinolinate synthetase compare
Atu1242 -2.6 -11.9 cytochrome oxidase assembly factor compare
Atu1457 -2.6 -3.2 hypothetical protein compare
Atu0770 -2.6 -5.9 cytochrome C oxidase assembly protein compare
Atu3337 -2.5 -11.7 LacI family transcriptional regulator compare
Atu0029 -2.5 -7.0 S-adenosylhomocysteine hydrolase compare
Atu1364 -2.5 -7.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2799 -2.4 -5.9 precorrin-6x reductase compare
Atu0981 -2.4 -9.1 glutamate-ammonia-ligase adenylyltransferase compare
Atu0792 -2.4 -6.7 hypothetical protein compare
Atu3997 -2.3 -14.3 biotin synthetase compare
Atu3162 -2.3 -10.1 LacI family transcriptional regulator compare
Atu1891 -2.3 -4.9 cobalamin biosynthesis protein compare
Atu0768 -2.2 -12.4 cytochrome-c oxidase chain I compare
Atu2205 -2.2 -5.5 transcriptional regulator, MarR family compare
Atu0346 -2.2 -3.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2802 -2.2 -7.4 precorrin-8X methylmutase compare
Atu2809 -2.2 -7.3 cobalamin biosynthesis protein compare
Atu1542 -2.1 -7.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0598 -2.1 -9.9 phosphogluconate dehydratase compare
Atu3912 -2.1 -9.7 hypothetical protein compare
Atu2796 -2.1 -8.1 precorrin-4 C11-methyltransferase compare
Atu2798 -2.1 -5.8 precorrin-6y methyltransferase compare
Atu2554 -2.0 -3.4 lysyl-tRNA synthetase compare
Atu0767 -2.0 -4.6 cytochrome c oxidase subunit II compare
Atu4232 -2.0 -8.0 GntR family transcriptional regulator compare
Atu3289 -2.0 -6.4 thiamine-phosphate pyrophosphorylase compare
Atu0434 -2.0 -3.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3963 -2.0 -7.0 GntR family transcriptional regulator compare
Atu2804 -2.0 -10.0 cobaltochelatase subunit compare
Atu2805 -2.0 -7.0 cobalamin synthesis protein compare
Atu3598 -2.0 -4.4 thiol:disulfide interchange protein compare
Atu0401 -2.0 -8.6 fructokinase compare
Atu2532 -1.9 -4.7 transcriptional regulator, MarR family compare
Atu1074 -1.9 -12.4 NAD/NADP dependent oxidoreductase compare
Atu6114 -1.9 -4.0 hypothetical protein compare
Atu2801 -1.9 -4.9 precorrin-2 C20 methyltransferase compare
Atu0354 -1.9 -2.3 ferric uptake regulator compare
Atu2808 -1.9 -7.9 cobyric acid synthase compare
Atu4514 -1.8 -6.4 RpiR family transcriptional regulator compare
Atu3485 -1.8 -9.7 short chain dehydrogenase compare
Atu2807 -1.8 -7.2 cob(I)alamin adenosyltransferase compare
Atu0536 -1.8 -8.8 hypothetical protein compare
Atu2795 -1.8 -8.0 cobalamin biosynthetic protein compare
Atu3794 -1.8 -9.6 FadR family transcriptional regulator compare
Atu3290 -1.8 -8.1 phosphomethylpyrimidine kinase compare
Atu2569 -1.8 -9.8 thiamine biosynthesis protein compare
Atu8087 -1.8 -1.3 putative peptidoglycan binding protein compare
Atu4530 -1.7 -5.9 TetR family transcriptional regulator compare
Atu0421 -1.7 -2.0 ABC transporter, membrane spanning protein compare
Atu0803 -1.7 -12.0 pyruvate,orthophosphate dikinase compare
Atu0876 -1.7 -2.4 superoxide dismutase compare
Atu4446 -1.7 -7.9 hypothetical protein compare
Atu2555 -1.7 -3.9 L-lysine 2,3-aminomutase compare
Atu2800 -1.7 -2.4 precorrin-3B C17-methyltransferase compare
Atu0723 -1.6 -1.9 FAD dependent oxidoreductase compare
Atu2803 -1.6 -3.9 Cobalamin biosynthesis associated protein compare
Atu0190 -1.6 -6.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1062 -1.6 -2.4 phosphatidylserine synthase compare
Atu4364 -1.6 -6.4 LacI family transcriptional regulator compare
Atu3613 -1.6 -5.8 hypothetical protein compare
Atu1303 -1.6 -10.5 exoribonuclease compare
Atu1620 -1.6 -8.8 triosephosphate isomerase compare
Atu0291 -1.5 -7.1 hypothetical protein compare
Atu4097 -1.5 -8.9 L-aspartate oxidase compare
Atu1774 -1.5 -9.4 ABC transporter, substrate binding protein (peptide) compare
Atu2793 -1.5 -5.4 cobyrinic acid a,c-diamide synthase compare
Atu1449 -1.5 -4.6 potassium uptake protein compare
Atu2125 -1.5 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0590 -1.5 -8.4 transcriptional regulator repressor compare
Atu3144 -1.5 -5.5 GntR family transcriptional regulator compare
Atu0205 -1.5 -9.0 methylmalonate-semialdehyde dehydrogenase compare
Atu2267 -1.5 -6.5 hypothetical protein compare
Atu4128 -1.4 -9.9 GMC type oxidoreductase compare
Atu0846 -1.4 -4.3 transcriptional regulator, MarR family compare
Atu4576 -1.4 -8.6 ROK family transcriptional regulator compare
Atu1204 -1.4 -6.0 potassium uptake protein compare
Atu5125 -1.4 -4.5 GntR family transcriptional regulator compare
Atu3288 -1.3 -6.1 hydroxyethylthiazole kinase compare
Atu2797 -1.3 -2.5 cobalamin biosynthesis protein compare
Atu4000 -1.3 -9.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu2115 -1.3 -6.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1546 -1.3 -4.8 transcriptional regulator, MerR family compare
Atu1904 -1.3 -4.2 transcriptional regulator compare
Atu2017 -1.3 -1.3 hypothetical protein compare
Atu4346 -1.2 -2.7 hypothetical protein compare
Atu4001 -1.2 -7.2 3-oxoacyl-ACP synthase compare
Atu4674 -1.2 -7.3 GntR family transcriptional regulator compare
Atu3075 -1.2 -5.5 TetR family transcriptional regulator compare
Atu0272 -1.2 -3.7 transcriptional regulator, MarR family compare
Atu1902 -1.2 -2.8 transketolase compare
Atu0361 -1.2 -2.0 transcriptional regulator compare
Atu3219 -1.2 -8.4 dihydroxy-acid dehydratase compare
Atu0602 -1.2 -6.1 glutamine synthetase compare
Atu0026 -1.2 -1.0 hypothetical protein compare
Atu4217 -1.2 -1.6 TetR family transcriptional regulator compare
Atu4317 -1.2 -2.9 TetR family transcriptional regulator compare
Atu5464 -1.2 -6.4 IclR family transcriptional regulator compare
Atu3910 -1.2 -4.4 LamB/YcsF family protein compare


Specific Phenotypes

For 27 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Agrobacterium fabrum C58

For carbon source N-Acetyl-D-Glucosamine across organisms