| | gene | name | fitness | t score | description | |
|---|
| b0145 | dksA | -3.2 | -2.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2620 | smpB | -2.8 | -2.7 | SsrA-binding protein (NCBI) | compare |
| b0082 | mraW | -2.8 | -3.7 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3199 | yrbK | -2.6 | -2.8 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | -2.3 | -2.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3792 | wzxE | -2.3 | -7.7 | O-antigen translocase (NCBI) | compare |
| b4436 | ryeC | -2.2 | -1.5 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b3341 | rpsG | -2.2 | -1.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b4704 | arrS | -2.2 | -1.5 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b3021 | ygiT | -2.2 | -3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0949 | uup | -2.1 | -7.5 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1514 | lsrC | -2.1 | -1.9 | AI2 transporter (NCBI) | compare |
| b2688 | gshA | -2.0 | -6.8 | glutamate--cysteine ligase (NCBI) | compare |
| b2808 | gcvA | -2.0 | -4.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2894 | xerD | -2.0 | -1.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3778 | rep | -2.0 | -6.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2820 | recB | -1.9 | -1.3 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0705 | ybfL | -1.9 | -3.7 | putative receptor protein (VIMSS) | compare |
| b1863 | ruvC | -1.8 | -3.5 | Holliday junction resolvase (NCBI) | compare |
| b2236 | yfaE | -1.8 | -3.0 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b2567 | rnc | -1.8 | -2.0 | ribonuclease III (NCBI) | compare |
| b2938 | speA | -1.8 | -8.5 | arginine decarboxylase (NCBI) | compare |
| b1860 | ruvB | -1.8 | -2.0 | Holliday junction DNA helicase B (NCBI) | compare |
| b3121 | yhaC | -1.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b1650 | nemA | -1.8 | -3.1 | N-ethylmaleimide reductase, FMN-linked (NCBI) | compare |
| b1286 | rnb | -1.7 | -3.3 | exoribonuclease II (NCBI) | compare |
| b2699 | recA | -1.7 | -1.9 | recombinase A (NCBI) | compare |
| b3871 | bipA | -1.7 | -8.3 | GTP-binding protein (NCBI) | compare |
| b1063 | yceB | -1.7 | -2.7 | predicted lipoprotein (NCBI) | compare |
| b0118 | acnB | -1.7 | -2.9 | aconitate hydratase (NCBI) | compare |
| b2937 | speB | -1.6 | -5.8 | agmatinase (NCBI) | compare |
| b4546 | ypeB | -1.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.6 | -5.8 | glucose-inhibited division protein A (NCBI) | compare |
| b0683 | fur | -1.6 | -2.0 | ferric uptake regulator (NCBI) | compare |
| b2569 | lepA | -1.6 | -3.4 | GTP-binding protein LepA (NCBI) | compare |
| b2318 | truA | -1.6 | -3.6 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0431 | cyoB | -1.6 | -7.5 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b0142 | folK | -1.6 | -1.3 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1499 | ydeO | -1.6 | -2.7 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b2830 | nudH | -1.6 | -1.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1861 | ruvA | -1.6 | -2.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3935 | priA | -1.6 | -2.7 | primosome assembly protein PriA (NCBI) | compare |
| b1685 | ydiH | -1.6 | -1.5 | predicted protein (RefSeq) | compare |
| b0428 | cyoE | -1.6 | -4.8 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1001 | yccE | -1.5 | -2.8 | hypothetical protein (NCBI) | compare |
| b0432 | cyoA | -1.5 | -7.2 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b3781 | trxA | -1.5 | -3.3 | thioredoxin 1 (VIMSS) | compare |
| b0088 | murD | -1.5 | -1.4 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b0726 | sucA | -1.4 | -2.7 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0407 | yajC | -1.4 | -2.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b1865 | nudB | -1.4 | -1.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0857 | potI | -1.4 | -2.8 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1493 | gadB | -1.4 | -1.9 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b2784 | relA | -1.4 | -6.4 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b2055 | wcaE | -1.4 | -2.2 | predicted glycosyl transferase (NCBI) | compare |
| b2822 | recC | -1.4 | -4.0 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1279 | yciS | -1.4 | -1.5 | conserved inner membrane protein (NCBI) | compare |
| b2114 | metG | -1.3 | -1.2 | methionyl-tRNA synthetase (NCBI) | compare |
| b1576 | ydfD | -1.3 | -2.4 | Qin prophage; predicted protein (NCBI) | compare |
| b0957 | ompA | -1.3 | -3.2 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0890 | ftsK | -1.3 | -5.3 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3504 | yhiS | -1.3 | -2.8 | hypothetical protein (RefSeq) | compare |
| b3858 | yihD | -1.3 | -1.7 | hypothetical protein (NCBI) | compare |
| b2330 | yfcB | -1.3 | -2.2 | putative adenine-specific methylase (VIMSS) | compare |
| b3706 | trmE | -1.3 | -4.1 | tRNA modification GTPase (NCBI) | compare |
| b3472 | b3472 | -1.3 | -5.0 | orf, hypothetical protein (VIMSS) | compare |
| b4172 | hfq | -1.2 | -1.7 | RNA-binding protein Hfq (NCBI) | compare |
| b2279 | nuoK | -1.2 | -1.9 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1651 | gloA | -1.2 | -2.5 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b4375 | prfC | -1.2 | -4.7 | peptide chain release factor 3 (NCBI) | compare |
| b1104 | ycfL | -1.2 | -1.6 | hypothetical protein (NCBI) | compare |
| b0605 | ahpC | -1.2 | -4.3 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3164 | pnp | -1.2 | -2.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2532 | yfhQ | -1.2 | -2.8 | predicted methyltransferase (NCBI) | compare |
| b1551 | b1551 | -1.2 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2847 | yqeI | -1.2 | -5.2 | predicted transcriptional regulator (NCBI) | compare |
| b3463 | ftsE | -1.2 | -3.2 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2935 | tktA | -1.2 | -2.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2506 | yfgI | -1.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b1258 | yciF | -1.2 | -2.8 | hypothetical protein (NCBI) | compare |
| b2576 | srmB | -1.2 | -2.7 | ATP-dependent RNA helicase (NCBI) | compare |
| b4509 | ylcG | -1.2 | -1.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0888 | trxB | -1.2 | -2.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3658 | selC | -1.1 | -2.0 | tRNA-Sec (NCBI) | compare |
| b2110 | yehC | -1.1 | -2.9 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0053 | surA | -1.1 | -3.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1058 | yceO | -1.1 | -1.5 | hypothetical protein (NCBI) | compare |
| b0603 | ybdO | -1.1 | -2.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4279 | yjhB | -1.1 | -2.2 | putative transport protein (VIMSS) | compare |
| b0232 | yafN | -1.1 | -1.0 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1728 | ydjM | -1.1 | -2.2 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b4627 | ykfL | -1.1 | -2.0 | no description | compare |
| b3863 | polA | -1.1 | -1.0 | DNA polymerase I (NCBI) | compare |
| b1176 | minC | -1.1 | -2.7 | septum formation inhibitor (NCBI) | compare |
| b2650 | ypjC | -1.1 | -1.8 | hypothetical protein (RefSeq) | compare |
| b0430 | cyoC | -1.1 | -2.4 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3500 | gor | -1.1 | -1.0 | glutathione reductase (NCBI) | compare |
| b2642 | yfjW | -1.1 | -2.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2209 | eco | -1.1 | -2.1 | ecotin precursor (NCBI) | compare |
| b3261 | fis | -1.1 | -2.1 | DNA-binding protein Fis (NCBI) | compare |
| b0406 | tgt | -1.1 | -4.3 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b1731 | cedA | -1.0 | -2.1 | cell division modulator (RefSeq) | compare |
| b3950 | frwB | -1.0 | -1.8 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b1167 | ymgC | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b4552 | yrhC | -1.0 | -1.0 | no description | compare |
| b4201 | priB | -1.0 | -1.8 | primosomal replication protein N (NCBI) | compare |
| b3609 | secB | -1.0 | -1.9 | export protein SecB (NCBI) | compare |
| b2553 | glnB | -1.0 | -3.0 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b1130 | phoP | -1.0 | -4.1 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b1269 | rluB | -1.0 | -2.5 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b1686 | ydiI | -1.0 | -1.5 | hypothetical protein (NCBI) | compare |
| b1730 | ydjO | -1.0 | -1.8 | predicted protein (RefSeq) | compare |
| b2352 | yfdI | -0.9 | -2.9 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b1663 | mdtK | -0.9 | -3.5 | multidrug efflux protein NorM (NCBI) | compare |
| b1085 | b1085 | -0.9 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3146 | yraL | -0.9 | -3.9 | predicted methyltransferase (NCBI) | compare |
| b4094 | phnN | -0.9 | -2.6 | ribose 1,5-bisphosphokinase (NCBI) | compare |
| b3839 | tatC | -0.9 | -4.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4585 | sroB | -0.9 | -0.9 | Novel sRNA, function unknown (RefSeq) | compare |
| b0738 | tolR | -0.9 | -2.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2912 | ygfA | -0.9 | -1.8 | putative ligase (VIMSS) | compare |
| b4177 | purA | -0.9 | -1.8 | adenylosuccinate synthetase (NCBI) | compare |
| b2824 | ygdB | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2635 | ypjK | -0.9 | -1.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2625 | yfjI | -0.9 | -3.6 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1231 | tyrT | -0.9 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b3026 | qseC | -0.9 | -2.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0739 | tolA | -0.9 | -2.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3462 | ftsX | -0.9 | -3.5 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4128 | yjdK | -0.9 | -2.8 | hypothetical protein (NCBI) | compare |
| b1919 | yedO | -0.9 | -2.2 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b0999 | cbpM | -0.9 | -1.8 | modulator of CbpA co-chaperone (NCBI) | compare |
| b2287 | nuoB | -0.9 | -2.3 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0472 | recR | -0.9 | -3.9 | recombination protein RecR (NCBI) | compare |
| b3652 | recG | -0.9 | -4.8 | ATP-dependent DNA helicase (NCBI) | compare |
| b1259 | yciG | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3002 | yqhA | -0.9 | -1.4 | hypothetical protein (NCBI) | compare |
| b1977 | asnT | -0.8 | -1.6 | tRNA-Asn (NCBI) | compare |
| b1358 | ydaT | -0.8 | -1.3 | Rac prophage; predicted protein (NCBI) | compare |
| b4402 | yjjY | -0.8 | -0.9 | hypothetical protein (NCBI) | compare |
| b0784 | moaD | -0.8 | -1.5 | molybdopterin synthase, small subunit (NCBI) | compare |
| b4571 | wbbL | -0.8 | -2.2 | no description | compare |
| b0149 | mrcB | -0.8 | -5.4 | penicillin-binding protein 1b (NCBI) | compare |
| b1409 | ynbB | -0.8 | -2.8 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b1446 | ydcY | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b0767 | ybhE | -0.8 | -2.1 | 6-phosphogluconolactonase (NCBI) | compare |
| b0028 | fkpB | -0.8 | -2.8 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b3619 | rfaD | -0.8 | -2.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0014 | dnaK | -0.8 | -1.1 | molecular chaperone DnaK (NCBI) | compare |
| b2518 | ndk | -0.8 | -1.4 | nucleoside diphosphate kinase (NCBI) | compare |
| b1426 | ydcH | -0.8 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b4152 | frdC | -0.8 | -2.4 | fumarate reductase subunit C (NCBI) | compare |
| b4497 | yeeL | -0.8 | -3.1 | no description | compare |
| b1853 | yebK | -0.8 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0527 | ybcI | -0.8 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b0500 | ybbD | -0.8 | -1.4 | hypothetical protein (RefSeq) | compare |
| b4631 | ykgQ | -0.8 | -0.9 | no description | compare |
| b1497 | b1497 | -0.8 | -2.1 | putative enzyme (VIMSS) | compare |
| b3163 | nlpI | -0.8 | -2.4 | hypothetical protein (NCBI) | compare |
| b4508 | peaD | -0.8 | -1.7 | putative sensory transduction regulator (VIMSS) | compare |
| b0405 | queA | -0.8 | -2.8 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b3387 | dam | -0.8 | -4.9 | DNA adenine methylase (NCBI) | compare |
| b4441 | glmY | -0.8 | -1.1 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b4151 | frdD | -0.8 | -1.5 | fumarate reductase subunit D (NCBI) | compare |
| b4146 | yjeK | -0.8 | -1.7 | predicted lysine aminomutase (NCBI) | compare |
| b0113 | pdhR | -0.7 | -2.2 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1830 | prc | -0.7 | -2.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2579 | yfiD | -0.7 | -1.3 | pyruvate formate lyase subunit (NCBI) | compare |
| b0627 | tatE | -0.7 | -1.0 | twin arginine translocase protein E (NCBI) | compare |
| b0471 | ybaB | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b0724 | sdhB | -0.7 | -2.5 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3183 | obgE | -0.7 | -0.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4592 | yccB | -0.7 | -1.0 | hypothetical protein (RefSeq) | compare |
| b2947 | gshB | -0.7 | -2.2 | glutathione synthetase (NCBI) | compare |
| b4042 | dgkA | -0.7 | -1.7 | diacylglycerol kinase (NCBI) | compare |
| b4058 | uvrA | -0.7 | -5.3 | excinuclease ABC subunit A (NCBI) | compare |
| b2393 | nupC | -0.7 | -2.8 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3493 | pitA | -0.7 | -3.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b1238 | tdk | -0.7 | -3.4 | thymidine kinase (NCBI) | compare |
| b0721 | sdhC | -0.7 | -2.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1567 | intK | -0.7 | -1.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b2959 | yggL | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0222 | lpcA | -0.7 | -1.5 | phosphoheptose isomerase (NCBI) | compare |
| b4598 | yncL | -0.7 | -1.2 | hypothetical protein (RefSeq) | compare |
| b1989 | asnV | -0.7 | -1.4 | tRNA-Asn (NCBI) | compare |
| b4480 | hdfR | -0.7 | -2.6 | transcriptional regulator HdfR (NCBI) | compare |
| b3780 | rhlB | -0.7 | -4.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b0806 | ybiM | -0.7 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1179 | ycgL | -0.7 | -1.4 | conserved protein (NCBI) | compare |
| b2510 | b2510 | -0.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0226 | dinJ | -0.7 | -1.5 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b0051 | ksgA | -0.7 | -2.6 | dimethyladenosine transferase (NCBI) | compare |
| b3348 | slyX | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b4239 | treC | -0.7 | -2.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b4203 | rplI | -0.7 | -1.5 | 50S ribosomal protein L9 (NCBI) | compare |
| b0436 | tig | -0.7 | -3.4 | trigger factor (NCBI) | compare |
| b1691 | ydiN | -0.7 | -3.4 | predicted transporter (RefSeq) | compare |
| b1505 | ydeT | -0.7 | -2.6 | hypothetical protein (RefSeq) | compare |
| b2021 | hisC | -0.7 | -2.4 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b4188 | yjfN | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |