Experiment set2IT072 for Agrobacterium fabrum C58

Compare to:

Cellohexaose carbon source

200 most important genes:

  gene name fitness t score description  
Atu2718 -6.9 -6.7 homoserine O-succinyltransferase compare
Atu0679 -6.8 -6.6 ATP phosphoribosyltransferase compare
Atu1845 -6.7 -6.5 phosphoribosylformylglycinamidine synthase I compare
Atu2726 -6.5 -22.8 pyruvate carboxylase compare
Atu0537 -6.5 -4.5 histidinol dehydrogenase compare
Atu2289 -6.5 -19.2 anthranilate synthase component I and II compare
Atu2040 -6.5 -4.5 phosphoserine phosphatase compare
Atu1687 -6.5 -11.2 anthranilate phosphoribosyltransferase compare
Atu1205 -6.4 -13.8 threonine dehydratase compare
Atu0432 -6.4 -10.6 O-succinylhomoserine sulfhydrylase compare
Atu0678 -6.3 -4.4 histidyl-tRNA synthetase compare
Atu3707 -6.2 -4.3 phosphoserine aminotransferase compare
Atu3706 -6.2 -9.5 D-3-phosphoglycerate dehydrogenase compare
Atu0017 -6.1 -4.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0099 -6.1 -14.7 prephenate dehydratase compare
Atu2709 -5.9 -21.7 3-isopropylmalate dehydratase, large subunit compare
Atu1588 -5.9 -10.5 homoserine dehydrogenase compare
Atu0400 -5.8 -6.9 orotate phosphoribosyltransferase compare
Atu3754 -5.8 -7.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1850 -5.7 -6.8 phosphoribosylformylglycinamidine synthetase II compare
Atu0399 -5.7 -8.7 dihydroorotase compare
Atu2036 -5.6 -17.8 acetolactate synthase III, large subunit compare
Atu2264 -5.5 -16.3 2-isopropylmalate synthase compare
Atu3783 -5.4 -19.9 glutamate synthase subunit beta compare
Atu0298 -5.4 -9.7 orotidine 5 compare
Atu3784 -5.4 -27.4 glutamate synthase large subunit compare
Atu2791 -5.3 -8.8 3-isopropylmalate dehydrogenase compare
Atu0043 -5.3 -3.6 imidazoleglycerol-phosphate dehydratase compare
Atu1688 -5.2 -6.2 indole-3-glycerol-phosphate synthase compare
Atu0041 -5.1 -3.5 glutamine amidotransferase compare
Atu1307 -5.1 -9.7 dihydroorotase compare
Atu0039 -5.1 -3.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu4075 -4.9 -10.8 glycogen synthase compare
Atu2747 -4.8 -12.7 hypothetical protein compare
Atu1750 -4.7 -8.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu1140 -4.7 -5.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1308 -4.7 -8.1 aspartate carbamoyl transferase catalytic subunit compare
Atu0038 -4.7 -5.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3885 -4.6 -10.8 inositol monophosphatase compare
Atu2790 -4.5 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu3739 -4.4 -4.6 phosphoglycerate kinase compare
Atu1075 -4.3 -8.3 amidophosphoribosyltransferase compare
Atu2650 -4.3 -14.0 glycerol-3-phosphate dehydrogenase compare
Atu3755 -4.2 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0486 -4.2 -6.4 dihydroorotate dehydrogenase compare
Atu1844 -4.0 -5.5 Phosphoribosylformylglycinamidine synthetase compare
Atu0792 -4.0 -7.9 hypothetical protein compare
Atu0647 -4.0 -9.2 phosphoribosylamine--glycine ligase compare
Atu1030 -4.0 -3.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1141 -3.9 -7.3 Phosphoribosylglycinamide synthetase compare
Atu2015 -3.8 -14.7 aminotransferase compare
Atu1686 -3.8 -17.4 peptidyl-prolyl cis-trans isomerse D compare
Atu3482 -3.7 -9.8 pantoate--beta-alanine ligase compare
Atu0185 -3.6 -10.5 methylglyoxal synthase compare
Atu3483 -3.5 -8.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0184 -3.5 -3.7 glucokinase compare
Atu2548 -3.5 -17.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1589 -3.4 -7.9 aminotransferase, class I compare
Atu3005 -3.1 -2.1 hypothetical protein compare
Atu1446 -3.1 -3.0 two component response regulator compare
Atu0723 -3.1 -2.9 FAD dependent oxidoreductase compare
Atu0040 -3.0 -1.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3469 -2.9 -4.3 phosphoglyceromutase compare
Atu3999 -2.9 -3.0 dithiobiotin synthetase compare
Atu0641 -2.8 -6.1 hypothetical protein compare
Atu0030 -2.8 -2.8 phosphocarrier protein HPr compare
Atu3731 -2.8 -9.9 5-formyltetrahydrofolate cyclo-ligase compare
Atu0598 -2.7 -11.6 phosphogluconate dehydratase compare
Atu1359 -2.5 -2.0 dnaK deletion suppressor protein compare
Atu1463 -2.4 -10.3 glycine cleavage system component H compare
Atu1456 -2.4 -11.9 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2155 -2.3 -16.1 methionine synthase compare
Atu3997 -2.3 -14.9 biotin synthetase compare
Atu0769 -2.2 -2.8 protoheme IX farnesyltransferase compare
Atu1462 -2.0 -12.6 glycine cleavage system protein P2 compare
Atu1454 -2.0 -8.2 siroheme synthase compare
Atu1464 -2.0 -8.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu0029 -1.9 -7.7 S-adenosylhomocysteine hydrolase compare
Atu4773 -1.9 -2.7 two component response regulator compare
Atu4001 -1.9 -8.0 3-oxoacyl-ACP synthase compare
Atu5540 -1.9 -1.1 hypothetical protein compare
Atu4375 -1.9 -10.8 hypothetical protein compare
Atu4371 -1.9 -7.6 sugar ABC transporter permease compare
Atu2127 -1.8 -10.0 L-carnitine dehydratase compare
Atu3998 -1.8 -10.5 8-amino-7-oxononanoate synthase compare
Atu4370 -1.8 -9.3 sugar ABC transporter ATPase compare
Atu2205 -1.8 -5.7 transcriptional regulator, MarR family compare
Atu1455 -1.8 -6.5 hypothetical protein compare
Atu4369 -1.8 -8.2 sugar ABC transporter substrate-binding protein compare
Atu4000 -1.8 -13.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu1685 -1.7 -1.7 hypothetical protein compare
Atu1604 -1.7 -12.8 poly-beta-hydroxybutyrate synthase compare
Atu1526 -1.7 -9.8 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu1620 -1.7 -11.7 triosephosphate isomerase compare
Atu3289 -1.7 -5.0 thiamine-phosphate pyrophosphorylase compare
Atu4372 -1.7 -9.1 ribose ABC transporter permease compare
Atu5430 -1.7 -1.2 hypothetical protein compare
Atu3288 -1.7 -8.1 hydroxyethylthiazole kinase compare
Atu4096 -1.6 -7.9 nicotinate-nucleotide pyrophosphorylase compare
Atu1774 -1.6 -6.2 ABC transporter, substrate binding protein (peptide) compare
Atu2209 -1.6 -5.0 pyrroline-5-carboxylate reductase compare
Atu2125 -1.5 -3.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0188 -1.5 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu4098 -1.5 -9.2 quinolinate synthetase compare
Atu8115 -1.5 -4.0 Hypothetical Protein compare
Atu0503 -1.5 -11.5 enoyl-CoA hydratase compare
Atu0501 -1.5 -9.0 acyl-CoA dehydrogenase compare
Atu0502 -1.5 -7.2 acetyl-CoA acetyltransferase compare
Atu3908 -1.4 -7.8 GntR family transcriptional regulator compare
Atu2569 -1.4 -8.8 thiamine biosynthesis protein compare
Atu0421 -1.4 -2.1 ABC transporter, membrane spanning protein compare
Atu4374 -1.3 -6.7 hypothetical protein compare
Atu4097 -1.3 -7.9 L-aspartate oxidase compare
Atu1457 -1.3 -2.3 hypothetical protein compare
Atu8052 -1.3 -1.2 hypothetical protein compare
Atu3290 -1.3 -6.5 phosphomethylpyrimidine kinase compare
Atu0405 -1.3 -10.1 long-chain-fatty-acid-CoA-ligase compare
Atu1163 -1.2 -1.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1339 -1.2 -3.8 ribonuclease E compare
Atu3496 -1.2 -3.9 hypothetical protein compare
Atu8087 -1.2 -1.3 putative peptidoglycan binding protein compare
Atu0346 -1.2 -3.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4616 -1.2 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu2123 -1.2 -5.5 methylenetetrahydrofolate reductase compare
Atu1219 -1.1 -1.1 hypothetical protein compare
Atu0361 -1.1 -2.7 transcriptional regulator compare
Atu5427 -1.1 -3.2 hypothetical protein compare
Atu1572 -1.1 -6.0 hydrolase compare
Atu1748 -1.1 -6.6 NIFU-like protein compare
Atu0190 -1.1 -5.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1445 -1.1 -4.7 two component sensor kinase compare
Atu0031 -1.1 -1.6 PTS system, IIA component compare
Atu0981 -1.1 -7.1 glutamate-ammonia-ligase adenylyltransferase compare
Atu1904 -1.1 -2.5 transcriptional regulator compare
Atu3712 -1.1 -2.1 hypothetical protein compare
Atu4373 -1.1 -4.6 LacI family transcriptional regulator compare
Atu0590 -1.0 -5.9 transcriptional regulator repressor compare
Atu0331 -1.0 -2.2 sigma-54 modulation protein compare
Atu0687 -1.0 -2.8 hypothetical protein compare
Atu2020 -1.0 -4.7 transcriptional regulator, TetR family compare
Atu2770 -1.0 -5.0 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu1891 -1.0 -3.1 cobalamin biosynthesis protein compare
Atu8053 -1.0 -2.0 hypothetical protein compare
Atu2805 -1.0 -4.1 cobalamin synthesis protein compare
Atu2267 -1.0 -5.1 hypothetical protein compare
Atu5045 -0.9 -0.9 hypothetical protein compare
Atu0026 -0.9 -1.0 hypothetical protein compare
Atu3750 -0.9 -2.8 thiamine-phosphate pyrophosphorylase compare
Atu2801 -0.9 -3.0 precorrin-2 C20 methyltransferase compare
Atu1439 -0.9 -2.2 hypothetical protein compare
Atu3343 -0.9 -4.8 trehalose utilization-like protein compare
Atu2821 -0.9 -4.8 transcriptional regulator, GntR family compare
Atu3730 -0.9 -1.3 hypothetical protein compare
Atu3485 -0.9 -5.6 short chain dehydrogenase compare
Atu1542 -0.9 -4.2 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2057 -0.9 -2.2 DNA helicase II compare
Atu3429 -0.9 -1.4 hypothetical protein compare
Atu1546 -0.9 -2.4 transcriptional regulator, MerR family compare
Atu1372 -0.9 -3.5 hypothetical protein compare
Atu2684 -0.9 -1.4 hypothetical protein compare
Atu3240 -0.9 -5.2 ROK family transcriptional regulator compare
Atu0659 -0.9 -4.1 NTP pyrophosphohydrolase, MutT family compare
Atu0601 -0.9 -5.9 oxidoreductase compare
Atu4711 -0.9 -4.4 two component sensor kinase compare
Atu2795 -0.9 -5.2 cobalamin biosynthetic protein compare
Atu0434 -0.8 -2.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4217 -0.8 -1.2 TetR family transcriptional regulator compare
Atu0837 -0.8 -3.1 transcriptional regulator, MarR family compare
Atu0876 -0.8 -1.7 superoxide dismutase compare
Atu0422 -0.8 -1.4 ABC transporter, membrane spanning protein compare
Atu2800 -0.8 -1.6 precorrin-3B C17-methyltransferase compare
Atu1028 -0.8 -2.2 hypothetical protein compare
Atu6189 -0.8 -0.7 protein secretion chaperone compare
Atu2511 -0.8 -4.8 D-alanine aminotransferase compare
Atu3219 -0.8 -5.4 dihydroxy-acid dehydratase compare
Atu6106 -0.8 -1.1 conserved hypothetical protein compare
Atu4173 -0.8 -2.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu2804 -0.8 -5.3 cobaltochelatase subunit compare
Atu2808 -0.8 -4.6 cobyric acid synthase compare
Atu0768 -0.7 -4.9 cytochrome-c oxidase chain I compare
Atu4502 -0.7 -4.6 cobalamin synthesis protein compare
Atu0701 -0.7 -4.6 GGDEF family protein compare
Atu2640 -0.7 -2.7 hypothetical protein compare
Atu1242 -0.7 -4.9 cytochrome oxidase assembly factor compare
Atu0106 -0.7 -2.2 cold shock protein compare
Atu4077 -0.7 -4.6 glycogen branching protein compare
Atu3287 -0.7 -2.8 thiamine biosynthesis associated protein compare
Atu3342 -0.7 -3.7 trehalose utilization-like protein compare
Atu2802 -0.7 -4.5 precorrin-8X methylmutase compare
Atu6114 -0.7 -1.2 hypothetical protein compare
Atu2809 -0.7 -4.0 cobalamin biosynthesis protein compare
Atu2237 -0.7 -3.7 cytochrome c1 compare
Atu1185 -0.7 -0.9 hypothetical protein compare
Atu1286 -0.7 -3.0 hypothetical protein compare
Atu1364 -0.7 -3.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0332 -0.7 -3.7 RNA polymerase sigma-54 factor compare
Atu2140 -0.7 -2.1 hypothetical protein compare
Atu4897 -0.7 -1.0 hypothetical protein compare
Atu0086 -0.7 -0.9 ribosome-binding factor A compare
Atu5449 -0.7 -1.7 heat-shock protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Cellohexaose in Agrobacterium fabrum C58

For carbon source Cellohexaose across organisms