Experiment set2IT068 for Pseudomonas simiae WCS417

Compare to:

Ethanol carbon source

200 most important genes:

  gene name fitness t score description  
PS417_18600 -7.5 -5.2 isopropylmalate isomerase compare
PS417_01575 -6.6 -6.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_01855 -6.4 -4.4 phosphoribosyl-AMP cyclohydrolase compare
PS417_00185 -5.9 -4.1 tryptophan synthase subunit beta compare
PS417_18560 -5.4 -8.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_17415 -5.3 -10.7 histidine kinase compare
PS417_04415 -5.2 -11.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_23800 -5.2 -14.5 ketol-acid reductoisomerase compare
PS417_18585 -5.1 -7.8 3-isopropylmalate dehydrogenase compare
PS417_23545 -5.1 -3.5 gamma-glutamyl kinase compare
PS417_27040 -5.1 -6.0 3-phosphoglycerate dehydrogenase compare
PS417_24745 -4.9 -5.9 gamma-glutamyl phosphate reductase compare
PS417_17420 -4.9 -10.7 ethanol oxidation regulatory protein ercA (from data) conserved
PS417_25715 -4.8 -6.6 anthranilate phosphoribosyltransferase compare
PS417_23805 -4.8 -7.3 acetolactate synthase 3 regulatory subunit compare
PS417_25725 -4.8 -18.3 anthranilate synthase component I compare
PS417_25720 -4.6 -9.5 anthranilate synthase component II compare
PS417_12290 -4.4 -10.0 sulfite reductase compare
PS417_26740 -4.3 -13.4 homoserine acetyltransferase compare
PS417_23810 -4.2 -15.9 acetolactate synthase 3 catalytic subunit compare
PS417_04420 -4.1 -11.6 histidinol dehydrogenase compare
PS417_16570 -4.1 -13.6 isocitrate lyase compare
PS417_02510 -4.0 -5.8 ATP phosphoribosyltransferase regulatory subunit compare
PS417_18595 -4.0 -4.9 3-isopropylmalate dehydratase compare
PS417_21750 -4.0 -22.8 acetyl-CoA synthetase compare
PS417_26745 -4.0 -6.2 methionine biosynthesis protein MetW compare
PS417_16465 -3.9 -10.9 sirohydrochlorin ferrochelatase compare
PS417_18530 -3.8 -7.2 O-succinylhomoserine sulfhydrylase compare
PS417_25710 -3.8 -2.3 indole-3-glycerol-phosphate synthase compare
PS417_05595 -3.7 -10.0 ornithine carbamoyltransferase compare
PS417_23110 -3.7 -9.6 2-isopropylmalate synthase compare
PS417_21035 -3.6 -16.1 multidrug transporter compare
PS417_01565 -3.6 -5.8 imidazole glycerol phosphate synthase compare
PS417_23995 -3.5 -1.5 preprotein translocase subunit SecG compare
PS417_26040 -3.4 -4.8 malate synthase compare
PS417_27795 -3.3 -2.0 orotate phosphoribosyltransferase compare
PS417_25940 -3.3 -11.1 pyrroloquinoline quinone biosynthesis protein PqqE conserved
PS417_02005 -3.3 -14.3 glutamate synthase compare
PS417_01850 -3.3 -8.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_07640 -3.2 -3.6 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_27195 -3.1 -2.7 N-acetylglutamate synthase compare
PS417_02415 -3.1 -5.1 phosphoserine phosphatase compare
PS417_08125 -3.1 -1.9 prephenate dehydratase compare
PS417_20125 -3.1 -4.2 phosphoribosylglycinamide formyltransferase compare
PS417_02000 -3.1 -14.0 glutamate synthase compare
PS417_12855 -3.0 -6.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_26890 -2.9 -6.6 dihydroxy-acid dehydratase compare
PS417_24155 -2.9 -4.5 ATP-binding protein compare
PS417_17505 -2.9 -3.8 LuxR family transcriptional regulator compare
PS417_23770 -2.7 -3.9 exodeoxyribonuclease V subunit alpha compare
PS417_01570 -2.7 -3.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_17450 -2.6 -5.8 amino acid ABC transporter substrate-binding protein conserved
PS417_25920 -2.5 -8.6 pyrroloquinoline quinone biosynthesis protein PqqF conserved
PS417_00180 -2.5 -4.0 tryptophan synthase subunit alpha compare
PS417_25930 -2.5 -8.7 pyrroloquinoline quinone biosynthesis protein PqqC conserved
PS417_17480 -2.5 -5.7 branched-chain amino acid ABC transporter substrate-binding protein conserved
PS417_17435 -2.5 -11.2 dehydrogenase conserved
PS417_17495 -2.5 -7.6 multidrug ABC transporter permease conserved
PS417_01560 -2.4 -3.7 imidazoleglycerol-phosphate dehydratase compare
PS417_17455 -2.4 -3.2 cytochrome C compare
PS417_08220 -2.3 -1.7 epimerase compare
PS417_17425 -2.3 -6.8 hypothetical protein compare
PS417_01580 -2.3 -2.7 imidazole glycerol phosphate synthase compare
PS417_17485 -2.3 -5.0 membrane protein conserved
PS417_26730 -2.2 -1.8 pyrroline-5-carboxylate reductase compare
PS417_17460 -2.1 -10.2 Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data) conserved
PS417_17490 -2.0 -3.4 ABC transporter ATP-binding protein compare
PS417_27435 -1.9 -8.0 polyphosphate kinase compare
PS417_20985 -1.7 -2.8 porin compare
PS417_17475 -1.7 -9.5 histidine kinase conserved
PS417_04860 -1.7 -9.3 ATPase compare
PS417_20160 -1.6 -3.2 cysteine synthase compare
PS417_23775 -1.6 -1.9 exodeoxyribonuclease V subunit beta compare
PS417_24765 -1.6 -4.1 membrane protein compare
PS417_06375 -1.6 -1.6 deoxycytidine triphosphate deaminase compare
PS417_08225 -1.5 -6.1 acetolactate synthase compare
PS417_08205 -1.5 -5.0 acetyltransferase compare
PS417_01710 -1.5 -4.6 histidine utilization repressor compare
PS417_19425 -1.5 -1.6 allantoicase compare
PS417_20665 -1.5 -7.9 hypothetical protein compare
PS417_05840 -1.4 -2.7 LuxR family transcriptional regulator compare
PS417_01290 -1.4 -2.6 ADP-ribose diphosphatase compare
PS417_26995 -1.4 -7.3 phosphoserine phosphatase compare
PS417_20610 -1.4 -2.0 hypothetical protein compare
PS417_22385 -1.3 -7.6 quinolinate synthase A compare
PS417_22990 -1.3 -1.6 iron dicitrate transport regulator FecR compare
PS417_26990 -1.2 -2.0 RNA pyrophosphohydrolase compare
PS417_12310 -1.2 -6.8 methionine synthase compare
PS417_14655 -1.2 -1.7 lysine transporter LysE compare
PS417_17470 -1.2 -3.7 LuxR family transcriptional regulator compare
PS417_08200 -1.2 -3.2 hypothetical protein compare
PS417_08230 -1.2 -2.1 lipopolysaccharide biosynthesis protein RfbH compare
PS417_22445 -1.2 -4.0 ATP-dependent DNA helicase RuvB compare
PS417_08730 -1.2 -1.7 cytochrome C compare
PS417_01995 -1.2 -1.6 hypothetical protein compare
PS417_27315 -1.1 -1.5 hypothetical protein compare
PS417_24835 -1.1 -3.6 hypothetical protein compare
PS417_19965 -1.1 -7.1 histidine kinase compare
PS417_27305 -1.1 -6.3 5-formyltetrahydrofolate cyclo-ligase compare
PS417_26510 -1.1 -7.3 5,10-methylenetetrahydrofolate reductase compare
PS417_26985 -1.1 -3.4 phosphoenolpyruvate-protein phosphotransferase compare
PS417_10535 -1.1 -2.9 hypothetical protein compare
PS417_21700 -1.1 -4.5 arginine N-succinyltransferase compare
PS417_22520 -1.1 -2.4 histidine kinase compare
PS417_08195 -1.1 -6.0 hypothetical protein compare
PS417_23900 -1.1 -5.9 poly(A) polymerase compare
PS417_02805 -1.1 -1.3 urease subunit gamma compare
PS417_21030 -1.0 -5.8 GntR family transcriptional regulator compare
PS417_07995 -1.0 -5.3 LOG family protein compare
PS417_26850 -1.0 -1.0 twin-arginine translocation pathway signal protein compare
PS417_04595 -1.0 -2.9 cell division protein MraZ compare
PS417_23950 -1.0 -2.6 polynucleotide phosphorylase/polyadenylase compare
PS417_08155 -1.0 -2.1 integration host factor subunit beta compare
PS417_05985 -1.0 -3.6 chemotaxis protein CheY compare
PS417_27875 -0.9 -5.5 histidine kinase compare
PS417_03925 -0.9 -5.8 nicotinate-nucleotide pyrophosphorylase compare
PS417_28510 -0.9 -3.6 chromosome partitioning protein compare
PS417_18310 -0.9 -2.5 hypothetical protein compare
PS417_16715 -0.9 -1.5 DoxX family protein compare
PS417_08245 -0.9 -1.2 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_09325 -0.9 -4.2 peptidase S41 compare
PS417_00195 -0.9 -1.9 hypothetical protein compare
PS417_27035 -0.9 -3.4 FAD-linked oxidase compare
PS417_24840 -0.9 -2.2 hypothetical protein compare
PS417_20535 -0.9 -5.5 peptidylprolyl isomerase compare
PS417_02225 -0.9 -2.5 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_21705 -0.9 -3.3 arginine N-succinyltransferase compare
PS417_24935 -0.9 -0.8 hypothetical protein compare
PS417_07620 -0.9 -1.3 beta-hexosaminidase compare
PS417_20340 -0.8 -1.6 hypothetical protein compare
PS417_19335 -0.8 -2.5 isochorismatase compare
PS417_04180 -0.8 -2.4 GntR family transcriptional regulator compare
PS417_14940 -0.8 -1.9 LysR family transcriptional regulator compare
PS417_03455 -0.8 -1.4 type III secretion protein compare
PS417_17565 -0.8 -2.8 branched-chain amino acid aminotransferase compare
PS417_19275 -0.8 -1.3 hypothetical protein compare
PS417_14515 -0.8 -1.7 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_27475 -0.8 -2.0 membrane protein compare
PS417_13800 -0.8 -1.7 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_19805 -0.8 -2.1 flagellar M-ring protein FliF compare
PS417_04115 -0.8 -1.8 alpha/beta hydrolase compare
PS417_27135 -0.8 -0.7 glutamine synthetase compare
PS417_17500 -0.8 -1.6 sulfurtransferase compare
PS417_27010 -0.7 -4.4 threonine dehydratase compare
PS417_26770 -0.7 -2.2 tRNA (guanine-N7)-methyltransferase compare
PS417_20645 -0.7 -5.3 membrane protein compare
PS417_06895 -0.7 -2.7 DNA-binding protein compare
PS417_12935 -0.7 -2.4 RNA polymerase sigma factor compare
PS417_12355 -0.7 -1.6 magnesium chelatase compare
PS417_16490 -0.7 -1.6 cell division protein FtsK compare
PS417_22780 -0.7 -2.2 XRE family transcriptional regulator compare
PS417_00660 -0.7 -2.1 DSBA oxidoreductase compare
PS417_19270 -0.7 -2.4 hypothetical protein compare
PS417_15305 -0.7 -2.2 type VI secretion protein compare
PS417_21400 -0.7 -3.0 TetR family transcriptional regulator compare
PS417_22570 -0.7 -0.9 H-NS histone compare
PS417_20635 -0.7 -0.9 ABC transporter ATP-binding protein compare
PS417_22450 -0.7 -1.1 ATP-dependent DNA helicase RuvA compare
PS417_19065 -0.7 -1.0 monooxygenase compare
PS417_27005 -0.7 -0.9 membrane protein compare
PS417_25390 -0.7 -3.5 MFS transporter compare
PS417_06200 -0.7 -2.9 protein-PII uridylyltransferase compare
PS417_01210 -0.7 -4.4 hypothetical protein compare
PS417_12565 -0.7 -2.7 2-dehydro-3-deoxygluconokinase compare
PS417_18755 -0.7 -1.3 CrtK compare
PS417_14295 -0.7 -1.9 AraC family transcriptional regulator compare
PS417_14200 -0.7 -1.9 hypothetical protein compare
PS417_17590 -0.6 -1.8 ABC transporter substrate-binding protein compare
PS417_20720 -0.6 -2.2 cbb3-type cytochrome c oxidase subunit I compare
PS417_11845 -0.6 -2.5 RpiR family transcriptional regulator compare
PS417_14255 -0.6 -1.1 phosphate import ATP-binding protein PstB compare
PS417_05905 -0.6 -1.3 hypothetical protein compare
PS417_01950 -0.6 -3.3 malate dehydrogenase compare
PS417_25895 -0.6 -1.6 glyoxalase compare
PS417_06530 -0.6 -1.8 membrane protein compare
PS417_27085 -0.6 -2.2 AraC family transcriptional regulator compare
PS417_01435 -0.6 -0.9 hypothetical protein compare
PS417_16495 -0.6 -1.8 leucyl/phenylalanyl-tRNA--protein transferase compare
PS417_03100 -0.6 -1.0 pilus assembly protein compare
PS417_15170 -0.6 -3.4 long-chain fatty acid--CoA ligase compare
PS417_05830 -0.6 -2.2 hypothetical protein compare
PS417_10405 -0.6 -0.8 filamentous hemagglutinin compare
PS417_16555 -0.6 -0.9 cupin compare
PS417_02020 -0.6 -2.9 LysR family transcriptional regulator compare
PS417_17160 -0.6 -1.3 1-aminocyclopropane-1-carboxylate deaminase compare
PS417_09035 -0.6 -2.4 hypothetical protein compare
PS417_17925 -0.6 -1.4 acyl-CoA dehydrogenase compare
PS417_04865 -0.6 -1.8 molybdenum cofactor biosynthesis protein MoaC compare
PS417_22500 -0.6 -3.9 porin compare
PS417_14160 -0.6 -1.2 hypothetical protein compare
PS417_02375 -0.6 -3.0 hypothetical protein compare
PS417_01750 -0.6 -1.4 histidine ammonia-lyase compare
PS417_09915 -0.6 -0.8 hypothetical protein compare
PS417_23835 -0.6 -1.7 hypothetical protein compare
PS417_22795 -0.5 -0.7 exclusion suppressor FxsA compare
PS417_25270 -0.5 -2.0 NrdR family transcriptional regulator compare
PS417_05165 -0.5 -1.9 cytosol aminopeptidase compare
PS417_05025 -0.5 -1.3 maleylacetoacetate isomerase compare
PS417_28050 -0.5 -1.3 hypothetical protein compare
PS417_19630 -0.5 -1.5 LuxR family transcriptional regulator compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source Ethanol in Pseudomonas simiae WCS417

For carbon source Ethanol across organisms