Experiment set2IT068 for Agrobacterium fabrum C58

Compare to:

Gentibiose carbon source

200 most important genes:

  gene name fitness t score description  
Atu1687 -7.5 -8.9 anthranilate phosphoribosyltransferase compare
Atu1750 -7.3 -6.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -7.0 -6.8 3-isopropylmalate dehydrogenase compare
Atu0099 -7.0 -8.3 prephenate dehydratase compare
Atu2289 -7.0 -15.6 anthranilate synthase component I and II compare
Atu1844 -6.8 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0679 -6.8 -4.7 ATP phosphoribosyltransferase compare
Atu2709 -6.8 -15.8 3-isopropylmalate dehydratase, large subunit compare
Atu3783 -6.8 -16.4 glutamate synthase subunit beta compare
Atu2726 -6.7 -21.4 pyruvate carboxylase compare
Atu0298 -6.6 -6.4 orotidine 5 compare
Atu3885 -6.5 -6.4 inositol monophosphatase compare
Atu3784 -6.4 -25.6 glutamate synthase large subunit compare
Atu2264 -6.4 -12.9 2-isopropylmalate synthase compare
Atu1308 -6.3 -6.9 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -6.2 -6.1 orotate phosphoribosyltransferase compare
Atu3707 -6.0 -4.2 phosphoserine aminotransferase compare
Atu0486 -6.0 -7.0 dihydroorotate dehydrogenase compare
Atu1588 -6.0 -9.2 homoserine dehydrogenase compare
Atu0399 -6.0 -5.8 dihydroorotase compare
Atu1845 -6.0 -7.0 phosphoribosylformylglycinamidine synthase I compare
Atu1141 -6.0 -8.0 Phosphoribosylglycinamide synthetase compare
Atu2650 -5.8 -14.1 glycerol-3-phosphate dehydrogenase compare
Atu0017 -5.8 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0038 -5.8 -6.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0537 -5.8 -6.9 histidinol dehydrogenase compare
Atu3706 -5.8 -9.7 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -5.8 -5.6 phosphoserine phosphatase compare
Atu0678 -5.7 -5.6 histidyl-tRNA synthetase compare
Atu1205 -5.7 -14.8 threonine dehydratase compare
Atu1688 -5.6 -6.7 indole-3-glycerol-phosphate synthase compare
Atu1140 -5.6 -5.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2036 -5.6 -16.1 acetolactate synthase III, large subunit compare
Atu1307 -5.5 -7.5 dihydroorotase compare
Atu0647 -5.5 -5.4 phosphoribosylamine--glycine ligase compare
Atu1075 -5.5 -9.8 amidophosphoribosyltransferase compare
Atu3754 -5.4 -6.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0432 -5.3 -8.6 O-succinylhomoserine sulfhydrylase compare
Atu2747 -5.3 -11.8 hypothetical protein compare
Atu3755 -5.3 -6.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0184 -5.2 -3.6 glucokinase compare
Atu2718 -5.2 -9.9 homoserine O-succinyltransferase compare
Atu2790 -5.1 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu0043 -5.0 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -4.9 -3.3 glutamine amidotransferase compare
Atu3469 -4.8 -3.3 phosphoglyceromutase compare
Atu2015 -4.6 -13.9 aminotransferase compare
Atu3482 -4.5 -11.2 pantoate--beta-alanine ligase compare
Atu3483 -4.5 -7.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3739 -4.2 -4.2 phosphoglycerate kinase compare
Atu1686 -4.1 -16.5 peptidyl-prolyl cis-trans isomerse D compare
Atu1850 -4.1 -4.5 phosphoribosylformylglycinamidine synthetase II compare
Atu0769 -4.0 -3.4 protoheme IX farnesyltransferase compare
Atu0185 -4.0 -8.6 methylglyoxal synthase compare
Atu2548 -4.0 -18.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4075 -3.8 -9.1 glycogen synthase compare
Atu0030 -3.6 -2.5 phosphocarrier protein HPr compare
Atu1589 -3.5 -6.5 aminotransferase, class I compare
Atu1359 -3.4 -2.0 dnaK deletion suppressor protein compare
Atu0039 -3.4 -3.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu0792 -3.4 -5.4 hypothetical protein compare
Atu1446 -3.3 -4.5 two component response regulator compare
Atu0641 -3.1 -5.3 hypothetical protein compare
Atu0598 -3.0 -12.0 phosphogluconate dehydratase compare
Atu1030 -2.9 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0040 -2.8 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4098 -2.8 -12.9 quinolinate synthetase compare
Atu1456 -2.7 -13.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1455 -2.7 -3.4 hypothetical protein compare
Atu3731 -2.7 -8.1 5-formyltetrahydrofolate cyclo-ligase compare
Atu0723 -2.7 -2.5 FAD dependent oxidoreductase compare
Atu4096 -2.5 -8.7 nicotinate-nucleotide pyrophosphorylase compare
Atu2155 -2.5 -16.7 methionine synthase compare
Atu1454 -2.5 -11.7 siroheme synthase compare
Atu8054 -2.5 -1.0 hypothetical protein compare
Atu4097 -2.4 -11.3 L-aspartate oxidase compare
Atu3999 -2.3 -2.8 dithiobiotin synthetase compare
Atu3997 -2.2 -14.6 biotin synthetase compare
Atu1748 -2.2 -8.8 NIFU-like protein compare
Atu0876 -2.2 -1.8 superoxide dismutase compare
Atu1685 -2.2 -1.7 hypothetical protein compare
Atu2569 -2.1 -13.5 thiamine biosynthesis protein compare
Atu3290 -2.1 -8.2 phosphomethylpyrimidine kinase compare
Atu2209 -2.1 -6.1 pyrroline-5-carboxylate reductase compare
Atu4374 -2.1 -8.9 hypothetical protein compare
Atu1462 -2.0 -12.8 glycine cleavage system protein P2 compare
Atu3998 -2.0 -12.0 8-amino-7-oxononanoate synthase compare
Atu1463 -2.0 -6.2 glycine cleavage system component H compare
Atu4001 -2.0 -7.5 3-oxoacyl-ACP synthase compare
Atu4000 -2.0 -11.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3289 -2.0 -3.7 thiamine-phosphate pyrophosphorylase compare
Atu4375 -1.9 -10.6 hypothetical protein compare
Atu3288 -1.9 -7.7 hydroxyethylthiazole kinase compare
Atu1604 -1.9 -12.3 poly-beta-hydroxybutyrate synthase compare
Atu1464 -1.9 -8.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu0029 -1.9 -6.7 S-adenosylhomocysteine hydrolase compare
Atu8115 -1.9 -5.5 Hypothetical Protein compare
Atu4373 -1.8 -6.8 LacI family transcriptional regulator compare
Atu2127 -1.8 -9.3 L-carnitine dehydratase compare
Atu0354 -1.7 -2.7 ferric uptake regulator compare
Atu2125 -1.7 -2.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu5430 -1.7 -1.4 hypothetical protein compare
Atu0503 -1.7 -11.7 enoyl-CoA hydratase compare
Atu6189 -1.7 -1.4 protein secretion chaperone compare
Atu1526 -1.6 -8.5 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu0501 -1.6 -8.0 acyl-CoA dehydrogenase compare
Atu4173 -1.6 -3.4 phosphoenolpyruvate-protein phosphotransferase compare
Atu0422 -1.5 -1.8 ABC transporter, membrane spanning protein compare
Atu4773 -1.5 -1.9 two component response regulator compare
Atu3908 -1.5 -7.9 GntR family transcriptional regulator compare
Atu2821 -1.5 -5.2 transcriptional regulator, GntR family compare
Atu2205 -1.5 -4.6 transcriptional regulator, MarR family compare
Atu3730 -1.5 -1.8 hypothetical protein compare
Atu0189 -1.5 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu4217 -1.5 -2.3 TetR family transcriptional regulator compare
Atu0434 -1.4 -3.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0361 -1.4 -2.5 transcriptional regulator compare
Atu1572 -1.4 -6.4 hydrolase compare
Atu0031 -1.4 -1.7 PTS system, IIA component compare
Atu0777 -1.3 -1.2 hypothetical protein compare
Atu1457 -1.3 -2.0 hypothetical protein compare
Atu2809 -1.3 -7.2 cobalamin biosynthesis protein compare
Atu0502 -1.3 -5.1 acetyl-CoA acetyltransferase compare
Atu3712 -1.2 -1.4 hypothetical protein compare
Atu2770 -1.2 -6.0 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3008 -1.2 -1.1 hypothetical protein compare
Atu6114 -1.2 -1.9 hypothetical protein compare
Atu0601 -1.2 -6.7 oxidoreductase compare
Atu2799 -1.1 -3.2 precorrin-6x reductase compare
Atu2808 -1.1 -5.3 cobyric acid synthase compare
Atu1542 -1.1 -4.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0188 -1.1 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0976 -1.1 -2.3 cycL protein compare
Atu1774 -1.1 -7.3 ABC transporter, substrate binding protein (peptide) compare
Atu1163 -1.1 -2.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2123 -1.1 -5.8 methylenetetrahydrofolate reductase compare
Atu2376 -1.1 -0.9 hypothetical protein compare
Atu3468 -1.1 -1.1 hypothetical protein compare
Atu0346 -1.0 -3.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2555 -1.0 -3.9 L-lysine 2,3-aminomutase compare
Atu0190 -1.0 -4.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1891 -1.0 -3.0 cobalamin biosynthesis protein compare
Atu1802 -1.0 -4.0 lactoylglutathione lyase compare
Atu0837 -1.0 -4.5 transcriptional regulator, MarR family compare
Atu2801 -1.0 -2.9 precorrin-2 C20 methyltransferase compare
Atu2083 -1.0 -2.7 DNA repair protein RecN compare
Atu2640 -1.0 -3.8 hypothetical protein compare
Atu4711 -1.0 -4.5 two component sensor kinase compare
Atu2554 -1.0 -2.2 lysyl-tRNA synthetase compare
Atu0332 -1.0 -5.2 RNA polymerase sigma-54 factor compare
Atu2684 -1.0 -1.1 hypothetical protein compare
Atu1219 -1.0 -1.2 hypothetical protein compare
Atu3598 -0.9 -1.7 thiol:disulfide interchange protein compare
Atu0405 -0.9 -7.1 long-chain-fatty-acid-CoA-ligase compare
Atu0533 -0.9 -2.8 putative inhibitor of septum formation compare
Atu2267 -0.9 -4.2 hypothetical protein compare
Atu1620 -0.9 -6.0 triosephosphate isomerase compare
Atu1285 -0.9 -4.0 metal dependent hydrolase compare
Atu1009 -0.9 -2.6 hypothetical protein compare
Atu0319 -0.9 -1.3 ubiquinone biosynthesis protein compare
Atu5157 -0.9 -1.4 hypothetical protein compare
Atu2795 -0.9 -4.5 cobalamin biosynthetic protein compare
Atu1810 -0.9 -1.1 hypothetical protein compare
Atu1818 -0.9 -1.4 hypothetical protein compare
Atu4317 -0.9 -3.4 TetR family transcriptional regulator compare
Atu2207 -0.9 -2.3 two component sensor kinase compare
Atu2804 -0.9 -6.4 cobaltochelatase subunit compare
Atu2020 -0.8 -3.3 transcriptional regulator, TetR family compare
Atu2807 -0.8 -3.2 cob(I)alamin adenosyltransferase compare
Atu2805 -0.8 -3.7 cobalamin synthesis protein compare
Atu2192 -0.8 -1.3 hypothetical protein compare
Atu0611 -0.8 -3.6 ABC transporter, membrane spanning protein compare
Atu1182 -0.8 -1.8 hypothetical protein compare
Atu5485 -0.8 -1.6 hypothetical protein compare
Atu2802 -0.8 -3.0 precorrin-8X methylmutase compare
Atu2810 -0.8 -4.8 cobalamin biosynthetic protein compare
Atu1417 -0.8 -3.6 enoyl-CoA hydratase compare
Atu5427 -0.8 -1.5 hypothetical protein compare
Atu0565 -0.7 -1.6 hypothetical protein compare
Atu4078 -0.7 -5.8 glycogen phosphorylase compare
Atu0786 -0.7 -1.9 peptidase, family M16 compare
Atu0291 -0.7 -4.4 hypothetical protein compare
Atu3773 -0.7 -1.9 hypothetical protein compare
Atu0153 -0.7 -2.8 transcriptional regulator, Fur family compare
Atu3732 -0.7 -4.1 hemolysin compare
Atu1302 -0.7 -1.8 hypothetical protein compare
Atu2113 -0.7 -2.5 N-acetylmuramoyl-L-alanine amidase compare
Atu3763 -0.7 -1.2 hypothetical protein compare
Atu1445 -0.7 -1.8 two component sensor kinase compare
Atu1149 -0.7 -1.1 adenylate cyclase compare
Atu0659 -0.7 -3.3 NTP pyrophosphohydrolase, MutT family compare
Atu1364 -0.7 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3496 -0.7 -2.7 hypothetical protein compare
Atu0923 -0.7 -3.6 hypothetical protein compare
Atu2115 -0.7 -4.0 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0795 -0.6 -1.2 hypothetical protein compare
Atu4744 -0.6 -2.7 sugar ABC transporter substrate-binding protein compare
Atu2491 -0.6 -2.0 hypothetical protein compare
Atu0845 -0.6 -2.3 hypothetical protein compare
Atu0886 -0.6 -1.0 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Gentibiose in Agrobacterium fabrum C58

For carbon source Gentibiose across organisms