| | gene | name | fitness | t score | description | |
|---|
| b0920 | ycbC | -4.3 | -4.1 | conserved inner membrane protein (NCBI) | compare |
| b1105 | ycfM | -4.2 | -2.9 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4392 | slt | -4.0 | -10.0 | soluble lytic murein transglycosylase (VIMSS) | conserved |
| b0149 | mrcB | -3.5 | -5.4 | penicillin-binding protein 1b (NCBI) | compare |
| b1192 | ldcA | -3.4 | -4.0 | L,D-carboxypeptidase A (NCBI) | compare |
| b2567 | rnc | -3.3 | -2.2 | ribonuclease III (NCBI) | compare |
| b0957 | ompA | -3.2 | -4.3 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0463 | acrA | -3.2 | -8.5 | multidrug efflux system (NCBI) | compare |
| b2528 | iscA | -2.9 | -1.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b2330 | yfcB | -2.8 | -1.9 | putative adenine-specific methylase (VIMSS) | compare |
| b0433 | ampG | -2.8 | -12.2 | muropeptide transporter (NCBI) | conserved |
| b0737 | tolQ | -2.8 | -2.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3035 | tolC | -2.8 | -7.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0741 | pal | -2.7 | -3.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0738 | tolR | -2.7 | -1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3229 | sspA | -2.7 | -3.6 | stringent starvation protein A (NCBI) | compare |
| b0739 | tolA | -2.5 | -3.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2470 | acrD | -2.5 | -10.0 | aminoglycoside/multidrug efflux system (NCBI) | compare |
| b0434 | yajG | -2.4 | -6.8 | putative polymerase/proteinase (VIMSS) | compare |
| b3163 | nlpI | -2.3 | -4.8 | hypothetical protein (NCBI) | compare |
| b1103 | ycfF | -2.3 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0462 | acrB | -2.2 | -12.0 | multidrug efflux system protein (NCBI) | compare |
| b3871 | bipA | -2.2 | -10.5 | GTP-binding protein (NCBI) | compare |
| b2617 | smpA | -2.2 | -3.4 | small membrane protein A (VIMSS) | compare |
| b0605 | ahpC | -2.2 | -6.2 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b4375 | prfC | -2.1 | -4.8 | peptide chain release factor 3 (NCBI) | compare |
| b2553 | glnB | -2.1 | -4.5 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0051 | ksgA | -2.1 | -5.5 | dimethyladenosine transferase (NCBI) | compare |
| b1863 | ruvC | -2.1 | -3.5 | Holliday junction resolvase (NCBI) | compare |
| b4202 | rpsR | -2.0 | -2.3 | 30S ribosomal protein S18 (NCBI) | compare |
| b3183 | obgE | -2.0 | -1.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4172 | hfq | -2.0 | -1.9 | RNA-binding protein Hfq (NCBI) | compare |
| b0429 | cyoD | -2.0 | -3.9 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b0436 | tig | -2.0 | -7.4 | trigger factor (NCBI) | compare |
| b3613 | yibP | -2.0 | -5.6 | putative membrane protein (VIMSS) | compare |
| b3728 | pstS | -2.0 | -4.4 | phosphate transporter subunit (NCBI) | compare |
| b3636 | rpmG | -2.0 | -2.2 | 50S ribosomal protein L33 (NCBI) | compare |
| b0740 | tolB | -1.9 | -3.2 | translocation protein TolB precursor (NCBI) | compare |
| b3462 | ftsX | -1.9 | -4.6 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1129 | phoQ | -1.9 | -6.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b2494 | yfgC | -1.9 | -6.5 | predicted peptidase (NCBI) | compare |
| b1130 | phoP | -1.9 | -6.1 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0632 | dacA | -1.9 | -5.5 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0145 | dksA | -1.8 | -3.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4480 | hdfR | -1.8 | -5.6 | transcriptional regulator HdfR (NCBI) | compare |
| b3131 | agaR | -1.8 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3784 | rfe | -1.8 | -11.1 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b2576 | srmB | -1.8 | -3.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b3226 | yhcK | -1.8 | -5.1 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b2512 | yfgL | -1.8 | -3.9 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b4441 | glmY | -1.8 | -1.9 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b3933 | ftsN | -1.8 | -9.9 | essential cell division protein (NCBI) | compare |
| b3725 | pstB | -1.7 | -2.3 | phosphate transporter subunit (NCBI) | compare |
| b0431 | cyoB | -1.7 | -7.4 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3839 | tatC | -1.7 | -8.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2215 | ompC | -1.6 | -7.2 | outer membrane porin protein C (NCBI) | compare |
| b2701 | mltB | -1.6 | -4.8 | membrane-bound lytic murein transglycosylase B (NCBI) | compare |
| b3807 | cyaY | -1.6 | -6.3 | frataxin-like protein (NCBI) | compare |
| b2906 | visC | -1.6 | -5.1 | hypothetical protein (NCBI) | compare |
| b2279 | nuoK | -1.6 | -2.3 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3463 | ftsE | -1.6 | -3.7 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1286 | rnb | -1.6 | -3.0 | exoribonuclease II (NCBI) | compare |
| b3414 | gntY | -1.6 | -5.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b3935 | priA | -1.6 | -2.9 | primosome assembly protein PriA (NCBI) | compare |
| b2911 | ssrS | -1.5 | -1.4 | 6S regulatory RNA (NCBI) | compare |
| b3164 | pnp | -1.5 | -2.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1576 | ydfD | -1.5 | -2.5 | Qin prophage; predicted protein (NCBI) | compare |
| b3425 | glpE | -1.5 | -6.1 | thiosulfate sulfurtransferase (NCBI) | compare |
| b2642 | yfjW | -1.5 | -2.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3912 | cpxR | -1.5 | -7.5 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b2937 | speB | -1.5 | -5.9 | agmatinase (NCBI) | compare |
| b3406 | greB | -1.4 | -4.5 | transcription elongation factor GreB (NCBI) | compare |
| b0249 | ykfF | -1.4 | -2.0 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0212 | gloB | -1.4 | -2.2 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b2699 | recA | -1.4 | -1.4 | recombinase A (NCBI) | compare |
| b0081 | mraZ | -1.4 | -4.0 | hypothetical protein (NCBI) | compare |
| b2055 | wcaE | -1.4 | -2.0 | predicted glycosyl transferase (NCBI) | compare |
| b0998 | torD | -1.4 | -1.3 | chaperone protein TorD (NCBI) | compare |
| b3884 | yihW | -1.4 | -4.9 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b3787 | rffD | -1.4 | -8.2 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0088 | murD | -1.4 | -2.0 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1830 | prc | -1.4 | -3.9 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b4042 | dgkA | -1.4 | -3.0 | diacylglycerol kinase (NCBI) | compare |
| b3199 | yrbK | -1.4 | -2.4 | hypothetical protein (NCBI) | compare |
| b1332 | ynaJ | -1.4 | -1.2 | predicted inner membrane protein (NCBI) | compare |
| b2807 | ygdD | -1.4 | -2.9 | conserved inner membrane protein (NCBI) | compare |
| b0603 | ybdO | -1.4 | -2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0623 | cspE | -1.4 | -2.0 | cold shock protein E (NCBI) | compare |
| b3341 | rpsG | -1.3 | -1.0 | 30S ribosomal protein S7 (NCBI) | compare |
| b2896 | ygfX | -1.3 | -4.1 | hypothetical protein (NCBI) | compare |
| b3977 | tyrU | -1.3 | -1.3 | tRNA-Tyr (NCBI) | compare |
| b1712 | ihfA | -1.3 | -2.4 | integration host factor subunit alpha (NCBI) | compare |
| b2830 | nudH | -1.3 | -1.7 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3472 | b3472 | -1.3 | -6.1 | orf, hypothetical protein (VIMSS) | compare |
| b3792 | wzxE | -1.3 | -6.9 | O-antigen translocase (NCBI) | compare |
| b1104 | ycfL | -1.3 | -1.2 | hypothetical protein (NCBI) | compare |
| b3764 | yifE | -1.3 | -4.1 | hypothetical protein (NCBI) | compare |
| b1540 | ydfH | -1.3 | -0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0912 | ihfB | -1.3 | -2.7 | integration host factor subunit beta (NCBI) | compare |
| b3863 | polA | -1.3 | -1.2 | DNA polymerase I (NCBI) | compare |
| b0430 | cyoC | -1.3 | -2.9 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3644 | yicC | -1.3 | -4.8 | hypothetical protein (NCBI) | compare |
| b1860 | ruvB | -1.3 | -1.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b0340 | cynS | -1.3 | -1.8 | cyanate hydratase (NCBI) | compare |
| b2510 | b2510 | -1.3 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b3794 | rffM | -1.3 | -5.0 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1984 | asnW | -1.3 | -1.2 | tRNA-Asn (NCBI) | compare |
| b1101 | ptsG | -1.3 | -6.2 | fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) | compare |
| b1109 | ndh | -1.2 | -3.1 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2350 | yfdG | -1.2 | -3.9 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b3928 | yiiU | -1.2 | -4.8 | hypothetical protein (NCBI) | compare |
| b3726 | pstA | -1.2 | -4.7 | phosphate transporter subunit (NCBI) | compare |
| b3261 | fis | -1.2 | -2.8 | DNA-binding protein Fis (NCBI) | compare |
| b2083 | yegZ | -1.2 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0677 | nagA | -1.2 | -3.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1347 | ydaC | -1.2 | -1.5 | Rac prophage; predicted protein (NCBI) | compare |
| b0053 | surA | -1.2 | -2.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2005 | yeeV | -1.2 | -2.8 | CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b3616 | tdh | -1.2 | -4.5 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b0849 | grxA | -1.2 | -1.9 | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) (NCBI) | compare |
| b0427 | yajR | -1.2 | -5.8 | putative transport protein (VIMSS) | compare |
| b1730 | ydjO | -1.2 | -2.5 | predicted protein (RefSeq) | compare |
| b1658 | purR | -1.2 | -4.1 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3786 | rffE | -1.1 | -7.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1107 | nagZ | -1.1 | -3.1 | beta-hexosaminidase (NCBI) | compare |
| b4655 | ythA | -1.1 | -2.0 | expressed protein (RefSeq) | compare |
| b1760 | ynjH | -1.1 | -2.1 | hypothetical protein (NCBI) | compare |
| b1167 | ymgC | -1.1 | -1.6 | hypothetical protein (NCBI) | compare |
| b1390 | paaC | -1.1 | -2.5 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b2659 | b2659 | -1.1 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1088 | yceD | -1.1 | -2.5 | hypothetical protein (NCBI) | compare |
| b3348 | slyX | -1.1 | -2.7 | hypothetical protein (NCBI) | compare |
| b1531 | marA | -1.1 | -2.0 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b0428 | cyoE | -1.1 | -3.7 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1634 | tppB | -1.1 | -3.4 | putative tripeptide transporter permease (NCBI) | compare |
| b3617 | kbl | -1.1 | -5.2 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2820 | recB | -1.1 | -1.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0082 | mraW | -1.1 | -2.6 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2897 | ygfY | -1.1 | -1.7 | hypothetical protein (NCBI) | compare |
| b1569 | dicC | -1.0 | -1.7 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b2188 | yejM | -1.0 | -4.7 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3790 | rffC | -1.0 | -3.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1409 | ynbB | -1.0 | -3.9 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b3791 | rffA | -1.0 | -5.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1394 | paaG | -1.0 | -1.7 | enoyl-CoA hydratase (NCBI) | compare |
| b3504 | yhiS | -1.0 | -2.6 | hypothetical protein (RefSeq) | compare |
| b1827 | kdgR | -1.0 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0432 | cyoA | -1.0 | -5.3 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b0890 | ftsK | -1.0 | -4.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3237 | argR | -1.0 | -3.0 | arginine repressor (NCBI) | compare |
| b0934 | ycbM | -1.0 | -2.2 | putative transport system permease protein (VIMSS) | compare |
| b1591 | b1591 | -1.0 | -1.3 | putative oxidoreductase component (VIMSS) | compare |
| b2366 | dsdA | -1.0 | -3.5 | D-serine dehydratase (NCBI) | compare |
| b0471 | ybaB | -1.0 | -2.3 | hypothetical protein (NCBI) | compare |
| b4685 | yrbN | -1.0 | -1.9 | expressed protein (RefSeq) | compare |
| b1097 | yceG | -1.0 | -3.2 | predicted aminodeoxychorismate lyase (NCBI) | compare |
| b4613 | dinQ | -0.9 | -1.4 | Damage inducible, function unknown (RefSeq) | compare |
| b0547 | ybcN | -0.9 | -2.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1954 | dsrA | -0.9 | -1.6 | regulatory antisense RNA (NCBI) | compare |
| b3121 | yhaC | -0.9 | -1.6 | hypothetical protein (NCBI) | compare |
| b1144 | ymfJ | -0.9 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1323 | tyrR | -0.9 | -2.7 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b1989 | asnV | -0.9 | -1.6 | tRNA-Asn (NCBI) | compare |
| b4191 | ulaR | -0.9 | -2.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3096 | yqjB | -0.9 | -1.7 | hypothetical protein (NCBI) | compare |
| b2593 | yfiH | -0.9 | -4.8 | hypothetical protein (NCBI) | compare |
| b1013 | ycdC | -0.9 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2804 | fucU | -0.9 | -1.7 | L-fucose mutarotase (NCBI) | compare |
| b1639 | ydhA | -0.9 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0092 | ddlB | -0.9 | -3.0 | D-alanylalanine synthetase (NCBI) | compare |
| b4647 | mokA | -0.9 | -1.4 | no description | compare |
| b3097 | yqjC | -0.9 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2910 | zapA | -0.9 | -2.9 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b4595 | yciY | -0.9 | -1.0 | hypothetical protein (RefSeq) | compare |
| b1259 | yciG | -0.9 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1557 | cspB | -0.9 | -1.4 | Qin prophage; cold shock protein (NCBI) | compare |
| b1936 | intG | -0.9 | -1.5 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1269 | rluB | -0.9 | -2.2 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b0401 | brnQ | -0.9 | -4.4 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b2352 | yfdI | -0.9 | -2.0 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b1085 | b1085 | -0.8 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2136 | yohD | -0.8 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1308 | pspE | -0.8 | -2.4 | thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) | compare |
| b4208 | cycA | -0.8 | -4.7 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b1847 | yebF | -0.8 | -1.2 | predicted protein (RefSeq) | compare |
| b2829 | ptsP | -0.8 | -4.8 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b4509 | ylcG | -0.8 | -2.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1499 | ydeO | -0.8 | -1.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1861 | ruvA | -0.8 | -1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4171 | miaA | -0.8 | -3.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3205 | yhbJ | -0.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b1358 | ydaT | -0.8 | -1.2 | Rac prophage; predicted protein (NCBI) | compare |
| b1992 | cobS | -0.8 | -1.5 | cobalamin synthase (NCBI) | compare |
| b4206 | ytfB | -0.8 | -4.3 | orf, hypothetical protein (VIMSS) | compare |
| b4503 | yafF | -0.8 | -1.3 | no description | compare |
| b0028 | fkpB | -0.8 | -2.2 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b1433 | b1433 | -0.8 | -2.4 | putative membrane transport protein (VIMSS) | compare |
| b0500 | ybbD | -0.8 | -1.3 | hypothetical protein (RefSeq) | compare |
| b2297 | pta | -0.8 | -1.0 | phosphate acetyltransferase (NCBI) | compare |
| b0722 | sdhD | -0.8 | -2.3 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |