Experiment set2IT064 for Agrobacterium fabrum C58

Compare to:

Xylitol carbon source

200 most important genes:

  gene name fitness t score description  
Atu1850 -6.7 -4.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0432 -6.5 -4.5 O-succinylhomoserine sulfhydrylase compare
Atu1687 -6.4 -7.7 anthranilate phosphoribosyltransferase compare
Atu1750 -6.3 -6.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu0099 -6.2 -6.1 prephenate dehydratase compare
Atu2709 -6.2 -12.7 3-isopropylmalate dehydratase, large subunit compare
Atu2791 -6.2 -6.0 3-isopropylmalate dehydrogenase compare
Atu3754 -6.1 -8.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2289 -6.1 -11.7 anthranilate synthase component I and II compare
Atu2650 -6.0 -10.8 glycerol-3-phosphate dehydrogenase compare
Atu2726 -5.8 -16.4 pyruvate carboxylase compare
Atu4482 -5.7 -10.3 xylulokinase conserved
Atu1845 -5.6 -5.5 phosphoribosylformylglycinamidine synthase I compare
Atu2264 -5.6 -10.8 2-isopropylmalate synthase compare
Atu0679 -5.6 -3.9 ATP phosphoribosyltransferase compare
Atu3706 -5.6 -5.4 D-3-phosphoglycerate dehydrogenase compare
Atu1075 -5.5 -5.4 amidophosphoribosyltransferase compare
Atu1205 -5.5 -9.8 threonine dehydratase compare
Atu1308 -5.4 -6.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0486 -5.2 -6.2 dihydroorotate dehydrogenase compare
Atu2036 -5.2 -11.2 acetolactate synthase III, large subunit compare
Atu1141 -5.2 -6.2 Phosphoribosylglycinamide synthetase compare
Atu0400 -5.2 -5.0 orotate phosphoribosyltransferase compare
Atu3755 -5.1 -3.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0298 -5.0 -6.0 orotidine 5 compare
Atu2718 -5.0 -7.7 homoserine O-succinyltransferase compare
Atu0537 -4.9 -3.4 histidinol dehydrogenase compare
Atu0038 -4.9 -5.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1688 -4.9 -3.4 indole-3-glycerol-phosphate synthase compare
Atu0678 -4.7 -3.3 histidyl-tRNA synthetase compare
Atu3482 -4.7 -8.1 pantoate--beta-alanine ligase compare
Atu0399 -4.6 -4.4 dihydroorotase compare
Atu0017 -4.6 -3.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2790 -4.4 -2.8 3-isopropylmalate dehydratase, small subunit compare
Atu2040 -4.4 -5.2 phosphoserine phosphatase compare
Atu1588 -4.3 -8.8 homoserine dehydrogenase compare
Atu3885 -4.3 -8.8 inositol monophosphatase compare
Atu0647 -4.2 -4.1 phosphoribosylamine--glycine ligase compare
Atu1307 -4.2 -7.0 dihydroorotase compare
Atu3739 -4.1 -3.6 phosphoglycerate kinase compare
Atu3707 -4.1 -4.0 phosphoserine aminotransferase compare
Atu1140 -4.0 -4.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0030 -3.7 -2.4 phosphocarrier protein HPr compare
Atu0043 -3.7 -2.5 imidazoleglycerol-phosphate dehydratase compare
Atu3337 -3.6 -12.3 LacI family transcriptional regulator compare
Atu0039 -3.5 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu3483 -3.5 -6.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0641 -3.5 -4.9 hypothetical protein compare
Atu1030 -3.4 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1844 -3.4 -4.5 Phosphoribosylformylglycinamidine synthetase compare
Atu4711 -3.3 -7.2 two component sensor kinase compare
Atu1456 -3.2 -11.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0064 -3.1 -12.6 ABC transporter, membrane spanning protein (sugar) compare
Atu2015 -3.0 -11.5 aminotransferase compare
Atu1454 -2.9 -9.0 siroheme synthase compare
Atu1359 -2.8 -1.8 dnaK deletion suppressor protein compare
Atu3783 -2.8 -14.2 glutamate synthase subunit beta compare
Atu6098 -2.8 -1.2 transcriptional regulator, HTH family compare
Atu0065 -2.8 -10.2 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu0041 -2.7 -2.5 glutamine amidotransferase compare
Atu1463 -2.6 -7.0 glycine cleavage system component H compare
Atu4685 -2.6 -9.1 LacI family transcriptional regulator compare
Atu3731 -2.6 -7.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu3469 -2.5 -3.0 phosphoglyceromutase compare
Atu2155 -2.5 -15.8 methionine synthase compare
Atu1462 -2.3 -11.7 glycine cleavage system protein P2 compare
Atu0026 -2.2 -1.3 hypothetical protein compare
Atu3784 -2.2 -16.9 glutamate synthase large subunit compare
Atu1589 -2.1 -5.5 aminotransferase, class I compare
Atu4674 -2.1 -11.9 GntR family transcriptional regulator compare
Atu0040 -2.0 -1.3 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0063 -2.0 -5.5 ABC transporter, substrate binding protein (sugar) compare
Atu2238 -1.9 -8.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0503 -1.9 -11.4 enoyl-CoA hydratase compare
Atu2747 -1.8 -11.6 hypothetical protein compare
Atu0189 -1.8 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu0876 -1.8 -1.8 superoxide dismutase compare
Atu5451 -1.8 -1.5 hypothetical protein compare
Atu1464 -1.8 -7.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu4223 -1.7 -2.9 sarcosine oxidase delta subunit compare
Atu0502 -1.7 -5.9 acetyl-CoA acetyltransferase compare
Atu0422 -1.7 -2.5 ABC transporter, membrane spanning protein compare
Atu4030 -1.7 -7.7 sugar ABC transporter permease compare
Atu8052 -1.7 -1.7 hypothetical protein compare
Atu3908 -1.7 -9.9 GntR family transcriptional regulator compare
Atu1286 -1.7 -3.6 hypothetical protein compare
Atu4032 -1.6 -8.3 sugar ABC transporter ATPase compare
Atu4702 -1.6 -5.9 GntR family transcriptional regulator compare
Atu0771 -1.6 -7.5 cytochrome c oxidase subunit III compare
Atu6114 -1.6 -3.3 hypothetical protein compare
Atu4031 -1.6 -8.0 sugar ABC transporter permease compare
Atu3613 -1.5 -5.7 hypothetical protein compare
Atu0981 -1.5 -6.8 glutamate-ammonia-ligase adenylyltransferase compare
Atu5540 -1.5 -1.1 hypothetical protein compare
Atu0590 -1.5 -6.7 transcriptional regulator repressor compare
Atu1455 -1.5 -3.7 hypothetical protein compare
Atu4317 -1.4 -2.7 TetR family transcriptional regulator compare
Atu0501 -1.4 -9.6 acyl-CoA dehydrogenase compare
Atu1446 -1.4 -2.8 two component response regulator compare
Atu0086 -1.4 -1.2 ribosome-binding factor A compare
Atu1457 -1.4 -2.1 hypothetical protein compare
Atu2548 -1.4 -9.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2209 -1.4 -3.0 pyrroline-5-carboxylate reductase compare
Atu0031 -1.3 -1.5 PTS system, IIA component compare
Atu2237 -1.3 -4.9 cytochrome c1 compare
Atu0792 -1.3 -5.9 hypothetical protein compare
Atu0434 -1.3 -2.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1686 -1.3 -9.4 peptidyl-prolyl cis-trans isomerse D compare
Atu4098 -1.3 -8.6 quinolinate synthetase compare
Atu4530 -1.3 -5.9 TetR family transcriptional regulator compare
Atu1685 -1.3 -1.2 hypothetical protein compare
Atu2662 -1.2 -1.5 acetyltransferase compare
Atu0101 -1.2 -2.4 cytochrome c compare
Atu4033 -1.2 -7.0 sugar ABC transporter substrate-binding protein compare
Atu0029 -1.2 -4.3 S-adenosylhomocysteine hydrolase compare
Atu1074 -1.2 -6.8 NAD/NADP dependent oxidoreductase compare
Atu2801 -1.2 -4.0 precorrin-2 C20 methyltransferase compare
Atu4034 -1.2 -6.4 two component sensor kinase compare
Atu2239 -1.1 -3.3 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu5057 -1.1 -1.2 hypothetical protein compare
Atu1891 -1.1 -2.5 cobalamin biosynthesis protein compare
Atu4576 -1.1 -5.5 ROK family transcriptional regulator compare
Atu3144 -1.1 -5.3 GntR family transcriptional regulator compare
Atu4176 -1.1 -5.9 hypothetical protein compare
Atu4035 -1.1 -4.8 two component response regulator compare
Atu2113 -1.1 -3.3 N-acetylmuramoyl-L-alanine amidase compare
Atu4773 -1.1 -1.8 two component response regulator compare
Atu0421 -1.1 -1.5 ABC transporter, membrane spanning protein compare
Atu3598 -1.1 -2.3 thiol:disulfide interchange protein compare
Atu0598 -1.1 -4.3 phosphogluconate dehydratase compare
Atu4096 -1.1 -4.8 nicotinate-nucleotide pyrophosphorylase compare
Atu0405 -1.1 -7.9 long-chain-fatty-acid-CoA-ligase compare
Atu1223 -1.1 -1.6 hypothetical protein compare
Atu1127 -1.1 -1.3 molybdopterin converting factor small subunit compare
Atu0770 -1.1 -3.7 cytochrome C oxidase assembly protein compare
Atu3288 -1.1 -4.7 hydroxyethylthiazole kinase compare
Atu0660 -1.0 -3.5 hydrolase compare
Atu0769 -1.0 -1.7 protoheme IX farnesyltransferase compare
Atu5115 -1.0 -1.3 hypothetical protein compare
Atu0361 -1.0 -2.1 transcriptional regulator compare
Atu8118 -1.0 -3.8 putative universal stress protein compare
Atu4128 -1.0 -7.5 GMC type oxidoreductase compare
Atu1242 -1.0 -5.9 cytochrome oxidase assembly factor compare
Atu4319 -1.0 -6.1 AraC family transcriptional regulator conserved
Atu3997 -1.0 -6.8 biotin synthetase compare
Atu2205 -1.0 -3.0 transcriptional regulator, MarR family compare
Atu2267 -1.0 -5.3 hypothetical protein compare
Atu0190 -1.0 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1847 -0.9 -1.5 hypothetical protein compare
Atu0837 -0.9 -3.6 transcriptional regulator, MarR family compare
Atu3963 -0.9 -3.9 GntR family transcriptional regulator compare
Atu0767 -0.9 -3.7 cytochrome c oxidase subunit II compare
Atu1542 -0.9 -3.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu8115 -0.9 -4.3 Hypothetical Protein compare
Atu5513 -0.9 -1.4 cold shock protein compare
Atu0768 -0.9 -4.8 cytochrome-c oxidase chain I compare
Atu3290 -0.9 -3.7 phosphomethylpyrimidine kinase compare
Atu0471 -0.9 -2.6 hypothetical protein compare
Atu3115 -0.8 -3.2 TetR family transcriptional regulator compare
Atu2532 -0.8 -2.8 transcriptional regulator, MarR family compare
Atu2376 -0.8 -0.7 hypothetical protein compare
Atu0536 -0.8 -3.7 hypothetical protein compare
Atu2249 -0.8 -1.0 hypothetical protein compare
Atu2207 -0.8 -2.0 two component sensor kinase compare
Atu2511 -0.8 -4.0 D-alanine aminotransferase compare
Atu4346 -0.8 -4.5 hypothetical protein compare
Atu0331 -0.8 -1.8 sigma-54 modulation protein compare
Atu1774 -0.8 -4.0 ABC transporter, substrate binding protein (peptide) compare
Atu6195 -0.8 -2.3 conserved hypothetical protein compare
Atu3240 -0.8 -5.4 ROK family transcriptional regulator compare
Atu2569 -0.8 -6.4 thiamine biosynthesis protein compare
Atu2606 -0.8 -2.4 transcriptional regulator, GntR family compare
Atu0322 -0.8 -2.5 enoyl CoA hydratase compare
Atu1062 -0.8 -1.4 phosphatidylserine synthase compare
Atu0291 -0.8 -5.0 hypothetical protein compare
Atu4599 -0.8 -5.0 IclR family transcriptional regulator compare
Atu1739 -0.8 -2.6 permease compare
Atu8012 -0.8 -1.1 hypothetical protein compare
Atu3289 -0.7 -2.2 thiamine-phosphate pyrophosphorylase compare
Atu0966 -0.7 -2.0 hypothetical protein compare
Atu6106 -0.7 -1.5 conserved hypothetical protein compare
Atu1241 -0.7 -1.8 hypothetical protein compare
Atu1185 -0.7 -2.0 hypothetical protein compare
Atu0354 -0.7 -1.2 ferric uptake regulator compare
Atu3730 -0.7 -1.0 hypothetical protein compare
Atu8099 -0.7 -1.5 hypothetical protein compare
Atu4099 -0.7 -3.6 hypothetical protein compare
Atu0346 -0.7 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0846 -0.7 -2.5 transcriptional regulator, MarR family compare
Atu4173 -0.7 -1.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu2809 -0.7 -4.0 cobalamin biosynthesis protein compare
Atu3251 -0.7 -3.8 haloacid dehalogenase compare
Atu2051 -0.7 -1.6 hypothetical protein compare
Atu4448 -0.7 -3.8 sorbitol/mannitol ABC transporter permease compare
Atu1163 -0.7 -1.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2733 -0.7 -2.5 hypothetical protein compare
Atu0895 -0.7 -1.7 ABC transporter, substrate binding protein compare
Atu1573 -0.7 -0.7 hypothetical protein compare
Atu8176 -0.7 -1.4 hypothetical protein compare
Atu2803 -0.7 -2.4 Cobalamin biosynthesis associated protein compare


Specific Phenotypes

For 24 genes in this experiment

For carbon source Xylitol in Agrobacterium fabrum C58

For carbon source Xylitol across organisms