Experiment set2IT063 for Magnetospirillum magneticum AMB-1

Compare to:

150_an_nonmag_3

200 most important genes:

  gene name fitness t score description  
AMB_RS03045 -5.1 -1.6 hydrogen peroxide-inducible genes activator compare
AMB_RS00695 -4.9 -1.7 gfo/Idh/MocA family oxidoreductase compare
AMB_RS17350 -4.6 -2.6 rubrerythrin compare
AMB_RS04280 -4.5 -16.5 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS11640 -4.4 -2.5 UbiX family flavin prenyltransferase compare
AMB_RS17235 -4.3 -1.6 AsmA family protein compare
AMB_RS00960 -4.1 -9.4 DNA-binding response regulator compare
AMB_RS05435 -4.0 -2.8 ABC transporter permease compare
AMB_RS01190 -3.9 -6.0 UbiD family decarboxylase compare
AMB_RS15610 -3.9 -6.7 hypothetical protein compare
AMB_RS24240 -3.9 -1.2 hypothetical protein compare
AMB_RS22450 -3.8 -11.8 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS22280 -3.8 -11.1 hypothetical protein compare
AMB_RS14035 -3.8 -5.7 endopeptidase La compare
AMB_RS18505 -3.7 -1.3 hypothetical protein compare
AMB_RS20350 -3.6 -11.8 aspartate 1-decarboxylase compare
AMB_RS15295 -3.6 -1.6 iron donor protein CyaY compare
AMB_RS22235 -3.6 -1.6 RNase adaptor protein RapZ compare
AMB_RS23155 -3.5 -1.1 two-component sensor histidine kinase compare
AMB_RS22800 -3.4 -3.3 glutathione synthase compare
AMB_RS17625 -3.4 -11.0 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS07660 -3.4 -1.2 hypothetical protein compare
AMB_RS00075 -3.4 -1.4 P-II family nitrogen regulator compare
AMB_RS00820 -3.3 -4.0 GDP-L-fucose synthase compare
AMB_RS07070 -3.3 -2.2 Crp/Fnr family transcriptional regulator compare
AMB_RS01330 -3.2 -4.4 glycosyltransferase family 39 protein compare
AMB_RS19325 -3.2 -11.6 NAD(P)/FAD-dependent oxidoreductase compare
AMB_RS24350 -3.2 -1.3 hypothetical protein compare
AMB_RS03060 -3.1 -1.6 peptidoglycan editing factor PgeF compare
AMB_RS24545 -3.0 -0.9 hypothetical protein compare
AMB_RS21750 -3.0 -0.9 DNA-binding response regulator compare
AMB_RS11195 -3.0 -0.7 sulfate adenylyltransferase subunit 2 compare
AMB_RS14175 -2.9 -2.2 COQ9 family protein compare
AMB_RS05910 -2.9 -0.9 hypothetical protein compare
AMB_RS19790 -2.9 -3.5 NAD(P)-dependent oxidoreductase compare
AMB_RS07010 -2.9 -8.6 ATP-dependent helicase compare
AMB_RS02525 -2.9 -11.6 U32 family peptidase compare
AMB_RS03230 -2.8 -1.9 hypothetical protein compare
AMB_RS05510 -2.7 -7.7 glycosyltransferase compare
AMB_RS16025 -2.7 -5.0 MFS transporter compare
AMB_RS02835 -2.7 -2.3 two-component sensor histidine kinase compare
AMB_RS21005 -2.7 -1.2 hypothetical protein compare
AMB_RS24000 -2.7 -1.8 glycosyltransferase family 1 protein compare
AMB_RS20145 -2.7 -1.0 chromosome segregation ATPase compare
AMB_RS17335 -2.6 -2.8 N-acyl-L-homoserine lactone synthetase compare
AMB_RS16100 -2.6 -6.2 RNA polymerase sigma factor RpoH compare
AMB_RS16130 -2.6 -4.2 phosphoglycerate dehydrogenase compare
AMB_RS00355 -2.6 -7.3 radical SAM protein compare
AMB_RS01540 -2.6 -1.3 peptidase M23 compare
AMB_RS17540 -2.5 -1.3 potassium transporter KefB compare
AMB_RS00010 -2.5 -1.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS06370 -2.5 -2.7 DNA-binding response regulator compare
AMB_RS04630 -2.4 -0.4 tRNA-Met compare
AMB_RS01265 -2.4 -0.9 LysR family transcriptional regulator compare
AMB_RS21385 -2.4 -4.5 helix-turn-helix transcriptional regulator compare
AMB_RS09295 -2.4 -1.4 carboxymuconolactone decarboxylase family protein compare
AMB_RS19340 -2.4 -0.6 EamA family transporter compare
AMB_RS02530 -2.3 -10.2 U32 family peptidase compare
AMB_RS21290 -2.3 -1.3 DUF4139 domain-containing protein compare
AMB_RS05220 -2.3 -0.6 hypothetical protein compare
AMB_RS07745 -2.3 -2.4 disulfide bond formation protein B compare
AMB_RS23195 -2.3 -4.5 ABC transporter ATP-binding protein compare
AMB_RS02500 -2.3 -1.1 hypothetical protein compare
AMB_RS05500 -2.3 -7.2 GDP-mannose 4,6 dehydratase compare
AMB_RS05505 -2.3 -5.2 GDP-mannose 4,6-dehydratase compare
AMB_RS16080 -2.2 -1.6 tRNA-Glu compare
AMB_RS19860 -2.2 -7.4 HlyC/CorC family transporter compare
AMB_RS08670 -2.2 -2.5 hypothetical protein compare
AMB_RS07700 -2.2 -0.9 hypothetical protein compare
AMB_RS21435 -2.2 -16.6 methylmalonyl-CoA mutase compare
AMB_RS00455 -2.2 -7.1 KR domain-containing protein compare
AMB_RS22565 -2.2 -9.9 MucR family transcriptional regulator compare
AMB_RS02610 -2.2 -0.7 hypothetical protein compare
AMB_RS23095 -2.2 -7.2 class I SAM-dependent methyltransferase compare
AMB_RS14565 -2.1 -3.0 sensor histidine kinase compare
AMB_RS19880 -2.0 -3.0 site-specific tyrosine recombinase XerD compare
AMB_RS13170 -2.0 -0.7 electron transport complex subunit RsxG compare
AMB_RS02725 -2.0 -1.3 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS17735 -2.0 -4.9 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
AMB_RS13150 -2.0 -3.4 electron transport complex subunit RsxA compare
AMB_RS03610 -2.0 -7.6 transcription elongation factor GreA compare
AMB_RS13155 -2.0 -3.0 electron transporter RnfB compare
AMB_RS01830 -2.0 -0.3 hypothetical protein compare
AMB_RS03780 -2.0 -0.7 hypothetical protein compare
AMB_RS22005 -1.9 -0.9 HD domain-containing protein compare
AMB_RS17450 -1.9 -0.6 DUF1987 domain-containing protein compare
AMB_RS09725 -1.9 -2.5 phage tail assembly chaperone compare
AMB_RS20195 -1.9 -1.0 iron transporter MagA compare
AMB_RS01160 -1.9 -3.5 glycosyltransferase compare
AMB_RS05210 -1.9 -4.8 hypothetical protein compare
AMB_RS08470 -1.9 -3.7 ABC transporter ATP-binding protein compare
AMB_RS13515 -1.8 -1.7 nitrate reductase cytochrome c-type subunit compare
AMB_RS17945 -1.8 -1.4 hypothetical protein compare
AMB_RS00120 -1.8 -3.1 YggS family pyridoxal phosphate-dependent enzyme compare
AMB_RS18590 -1.8 -1.7 glycosyltransferase family 2 protein compare
AMB_RS12785 -1.8 -2.9 murein transglycosylase compare
AMB_RS01910 -1.8 -0.6 head decoration protein compare
AMB_RS09095 -1.8 -2.5 hypothetical protein compare
AMB_RS10200 -1.8 -9.9 4-hydroxybenzoyl-CoA reductase subunit alpha compare
AMB_RS04885 -1.8 -1.2 hypothetical protein compare
AMB_RS22580 -1.7 -8.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AMB_RS03725 -1.7 -4.5 DNA helicase II compare
AMB_RS02825 -1.7 -2.4 phasin compare
AMB_RS13175 -1.7 -6.4 electron transport complex subunit E compare
AMB_RS12870 -1.7 -8.0 GNAT family N-acetyltransferase compare
AMB_RS11535 -1.7 -0.6 ChbG/HpnK family deacetylase compare
AMB_RS10120 -1.7 -2.6 DUF1476 domain-containing protein compare
AMB_RS09120 -1.7 -2.6 ABC transporter ATP-binding protein compare
AMB_RS22575 -1.7 -10.1 GNAT family N-acetyltransferase compare
AMB_RS19545 -1.7 -1.4 elongation factor 4 compare
AMB_RS07115 -1.7 -2.5 Lrp/AsnC family transcriptional regulator compare
AMB_RS05205 -1.7 -7.2 MFS transporter compare
AMB_RS12590 -1.7 -7.3 tetratricopeptide repeat protein compare
AMB_RS23205 -1.7 -5.4 glycosyl transferase compare
AMB_RS14505 -1.7 -2.4 carbon monoxide dehydrogenase compare
AMB_RS07075 -1.7 -8.3 cytochrome c-552 precursor compare
AMB_RS11805 -1.7 -10.4 MucR family transcriptional regulator compare
AMB_RS08330 -1.7 -2.2 HyaD/HybD family hydrogenase maturation endopeptidase compare
AMB_RS12560 -1.7 -1.9 penicillin-insensitive murein endopeptidase compare
AMB_RS13510 -1.6 -3.0 cytochrome C protein NapC compare
AMB_RS12385 -1.6 -4.4 alanine--glyoxylate aminotransferase family protein compare
AMB_RS18850 -1.6 -2.7 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS23210 -1.6 -7.9 glycosyl transferase compare
AMB_RS17550 -1.6 -6.1 2-isopropylmalate synthase compare
AMB_RS13160 -1.6 -10.5 electron transport complex subunit RsxC compare
AMB_RS21455 -1.5 -3.2 XRE family transcriptional regulator compare
AMB_RS18110 -1.5 -2.3 cAMP-binding protein compare
AMB_RS15620 -1.5 -3.9 RluA family pseudouridine synthase compare
AMB_RS06155 -1.5 -3.4 hypothetical protein compare
AMB_RS06005 -1.5 -1.5 hypothetical protein compare
AMB_RS04325 -1.5 -5.1 TetR/AcrR family transcriptional regulator compare
AMB_RS21800 -1.5 -1.6 hypothetical protein compare
AMB_RS00970 -1.5 -7.3 DUF1924 domain-containing protein compare
AMB_RS00245 -1.5 -2.4 transcriptional activator RfaH compare
AMB_RS01655 -1.5 -0.6 hypothetical protein compare
AMB_RS06280 -1.5 -6.0 hypothetical protein compare
AMB_RS13165 -1.5 -6.4 electron transporter RnfD compare
AMB_RS21280 -1.5 -2.0 TVP38/TMEM64 family protein compare
AMB_RS00965 -1.5 -1.7 membrane protein compare
AMB_RS03205 -1.5 -1.2 DNA recombination/repair protein RecA compare
AMB_RS06630 -1.5 -3.1 hypothetical protein compare
AMB_RS08455 -1.5 -7.0 branched-chain amino acid ABC transporter permease compare
AMB_RS10195 -1.5 -5.6 4-hydroxybenzoyl-CoA reductase subunit gamma compare
AMB_RS07520 -1.5 -1.4 hypothetical protein compare
AMB_RS21040 -1.5 -1.0 hypothetical protein compare
AMB_RS15605 -1.4 -5.0 ChbG/HpnK family deacetylase compare
AMB_RS03835 -1.4 -1.6 YicC family protein compare
AMB_RS22315 -1.4 -3.0 membrane protein compare
AMB_RS21535 -1.4 -0.7 cyclic nucleotide-binding domain-containing protein compare
AMB_RS08155 -1.4 -0.8 DUF4115 domain-containing protein compare
AMB_RS10475 -1.4 -1.2 transcriptional regulator NrdR compare
AMB_RS10725 -1.4 -2.7 hypothetical protein compare
AMB_RS17365 -1.4 -6.7 acriflavine resistance protein B compare
AMB_RS11460 -1.4 -2.6 MFS transporter compare
AMB_RS15510 -1.4 -3.2 4Fe-4S dicluster domain-containing protein compare
AMB_RS09125 -1.4 -4.2 ABC transporter ATP-binding protein compare
AMB_RS11780 -1.3 -4.1 glutamate synthase subunit beta compare
AMB_RS01325 -1.3 -2.3 phosphatase PAP2 family protein compare
AMB_RS14230 -1.3 -2.4 response regulator compare
AMB_RS10555 -1.3 -2.6 DNA repair protein RadA compare
AMB_RS18010 -1.3 -9.7 sensor histidine kinase compare
AMB_RS07180 -1.3 -1.7 membrane protein compare
AMB_RS11820 -1.3 -1.2 transcriptional regulator NrdR compare
AMB_RS11740 -1.3 -7.3 ubiquinone-binding protein compare
AMB_RS04320 -1.3 -2.1 DNA-binding response regulator compare
AMB_RS05495 -1.3 -7.1 hypothetical protein compare
AMB_RS13540 -1.3 -1.0 4Fe-4S dicluster domain-containing protein compare
AMB_RS14495 -1.3 -3.0 aminotransferase class V-fold PLP-dependent enzyme compare
AMB_RS13360 -1.3 -3.5 thiol:disulfide oxidoreductase compare
AMB_RS12920 -1.3 -3.1 exo-beta-1,3-glucanase compare
AMB_RS11775 -1.3 -10.3 glutamate synthase large subunit compare
AMB_RS13145 -1.3 -2.0 positive regulator of sigma E activity compare
AMB_RS10210 -1.3 -6.3 xanthine and CO dehydrogenase maturation factor compare
AMB_RS15520 -1.2 -4.3 hypothetical protein compare
AMB_RS15550 -1.2 -2.5 copper chaperone PCu(A)C compare
AMB_RS24615 -1.2 -2.6 IS3 family transposase compare
AMB_RS09970 -1.2 -0.2 NAD synthetase compare
AMB_RS01605 -1.2 -1.0 aspartate aminotransferase family protein compare
AMB_RS18145 -1.2 -2.2 GntR family transcriptional regulator compare
AMB_RS01175 -1.2 -4.7 C4-dicarboxylate ABC transporter compare
AMB_RS08460 -1.2 -5.7 branched-chain amino acid ABC transporter permease compare
AMB_RS07105 -1.2 -1.6 Lrp/AsnC family transcriptional regulator compare
AMB_RS19115 -1.2 -1.2 hypothetical protein compare
AMB_RS12410 -1.2 -4.2 excinuclease ABC subunit UvrA compare
AMB_RS01180 -1.2 -2.4 dihydrofolate reductase compare
AMB_RS05350 -1.2 -0.4 hypothetical protein compare
AMB_RS18370 -1.1 -0.8 hypothetical protein compare
AMB_RS23915 -1.1 -1.0 XRE family transcriptional regulator compare
AMB_RS20755 -1.1 -1.2 recombination protein RecR compare
AMB_RS07060 -1.1 -5.8 nitrite reductase compare
AMB_RS11000 -1.1 -3.0 N-formylglutamate amidohydrolase compare
AMB_RS02730 -1.1 -1.1 hypothetical protein compare
AMB_RS22965 -1.1 -2.0 XRE family transcriptional regulator compare
AMB_RS10640 -1.1 -1.9 endolytic transglycosylase MltG compare
AMB_RS01165 -1.1 -3.1 hypothetical protein compare
AMB_RS02240 -1.1 -1.0 surface lipoprotein compare
AMB_RS23900 -1.1 -2.6 PilZ domain-containing protein compare
AMB_RS00435 -1.1 -7.2 B12-binding domain-containing radical SAM protein compare
AMB_RS04340 -1.1 -2.2 enoyl-CoA hydratase compare
AMB_RS15215 -1.1 -3.2 methyltransferase domain-containing protein compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms